Pinf042073.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pegoplata infirma
Gene Symbol
-
Assembly
GCA_963921195.1
Location
OY992540.1:219558423-219598943[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 2.3 2e+02 4.1 3.4 1 23 65 88 65 88 0.87
2 28 0.14 12 7.9 9.3 2 23 516 537 515 537 0.97
3 28 0.00013 0.011 17.5 2.0 1 23 543 565 543 565 0.98
4 28 5.8 4.9e+02 2.8 0.0 1 23 599 621 599 621 0.95
5 28 0.022 1.9 10.4 7.9 3 23 629 649 627 649 0.98
6 28 0.0018 0.15 13.9 1.9 2 23 729 751 728 751 0.95
7 28 0.66 56 5.8 2.5 2 23 896 917 896 917 0.97
8 28 0.0052 0.44 12.4 5.2 1 23 923 945 923 945 0.99
9 28 0.0004 0.035 15.9 0.1 1 23 951 973 951 973 0.99
10 28 0.058 5 9.1 0.1 1 23 979 1001 979 1001 0.97
11 28 0.44 37 6.4 6.1 1 23 1007 1029 1007 1029 0.98
12 28 7 6e+02 2.6 0.4 1 11 1032 1042 1032 1048 0.85
13 28 6.5 5.6e+02 2.7 6.0 3 23 1270 1290 1269 1290 0.97
14 28 0.00043 0.037 15.8 2.5 1 23 1296 1318 1296 1318 0.99
15 28 0.00037 0.032 16.0 0.1 1 23 1324 1346 1324 1346 0.99
16 28 0.24 20 7.2 0.1 1 23 1352 1374 1352 1374 0.97
17 28 0.00056 0.048 15.5 6.9 1 23 1380 1402 1380 1402 0.98
18 28 0.086 7.4 8.6 2.7 1 23 1606 1628 1606 1628 0.93
19 28 0.018 1.5 10.8 1.8 1 23 1634 1656 1634 1656 0.98
20 28 0.13 11 8.0 0.2 1 23 1662 1684 1662 1684 0.97
21 28 0.14 12 7.9 3.2 1 23 1690 1712 1690 1712 0.98
22 28 5 4.3e+02 3.0 1.4 1 15 1715 1729 1715 1732 0.87
23 28 0.0077 0.66 11.9 1.2 2 23 1904 1925 1903 1925 0.96
24 28 0.023 1.9 10.4 1.3 1 23 1931 1953 1931 1953 0.98
25 28 5.3 4.5e+02 3.0 0.4 1 23 1959 1981 1957 1981 0.90
26 28 0.004 0.34 12.8 1.4 3 23 1989 2009 1987 2009 0.98
27 28 6.9 5.9e+02 2.6 0.1 1 10 2031 2040 2031 2046 0.86
28 28 0.00027 0.023 16.5 0.7 3 23 2076 2097 2074 2097 0.96

Sequence Information

Coding Sequence
ATGGAAACATTTGTAATTAAATCAGAACCACCAGAATTTGTGGAATCAAATCGACGAATAACATCGGGTGGTGGTGGTGACGCCGATGCTGCCGCAAGGGCTGTCGGTGAAAAAATACAAGAAACTGTCTCAAATGTCGAAAAGTCTCTATGTGGAGAAATATTTGTTACAAATAATGCTAAAAAATGGACTTTTACTTGttcttattgtcaaaaaactactCGCGACATTGGTGAATTTATTTGCCACATACAATTTAAACATTTGACTGGTCTCTACACTGATGATGACTATGGCGACGACGATAAAGAAAACGAGTTGCAACGAATGGGAAATACTATTTCTAATAAAGAAAAACAACCTGTATTGCCTCAAACCCTAATACAATCCAAGTCAAATGATAATACACTATTATTTCCATCGATTCCTACCATTGCACAGGTTTCTTCATTGGCCAGTTCCAATACTCCACCAACATTTGCAAATACCAATTTCGAGTATTCTGATTCTGTAGATTCTATTGAACATTTATCCTATGAAGCATCATCGAGTCAACAACATTTAAAATCTGCATCAACTTCATCTAATACACCAAATCCTAGCAAACGTCAAAAGATACAAGCAAACTCCAAACATAAAAATTCAATTGGAACCAAAAAAAAGAGAAATGAAAGAACCACTAATGAACAAttacaatattatttaaatttttgtcaaatcCATCCGGAGATTAAATCAATGAAATCTGAATCTGAAACAAGTAAACTTTGGAAGCAATTGAGCGATAAAATAAATTCAATGAAAGGACCAACGCGTACACCAAAAACATGGAGATCGAGCTTAGGTCATTGGAAAAATCAACTTCATAGTCGGGTACGTAAAGAAAAGGCGGCACGCTTAAAGGCTGGTTTTAGTTCGTCTGCAGAAGATTTAAATTCTTTTGATCAGTATGCACACAGAGTATTATataatgatgatgataatgaAATCTTAAATTCTTTGccaTCTGAAATAGTTACAGAACAACAAGCATTATTTGAGCAAGAAGAGTCCATATCATTAAGTTCCCCCTACATTCAGGAAGATCAAAAACCTACTGGGGAAGATTTACATTTATATCTTCAAGAACATCATGCAATTCTAGTCGATCAAAAACCAATTACAAAATATTTAGATCCTTCCGTATTTTTAAATGCACAACAAGGCTTTGAACAacaaacatcatcatcatcatccaaAAAACATAAGGACCATATTAAGAAGGAAACTTCGAaaaacgttaaaaattcttatgtTAAAAATCGTAATCCTAcacaaaatgattttgaaatattttttgtcgatGACGAGAATGATAATGGACAAACTGTTAAACATGAATCGATAGGCATTGACGATGAAGATGATGTTGAATCCGGAGGTGATAATGATGAGgaatacaataaaatattttatggcaACGATGAATCTGATGGCGGTGGAGACGGCGAAGCAAGTGGTAGTGGCAAACAACGGAGAAGAACGAGACAACCTTTTGGAATAACATATTGTAATTTATGTGACAAACATTTTCAATATCACCATCAATATCGTACTCATATGAATAGACATACGCAAAATACACCATATATATGTCCACATTGTGATAAATCTTTTAGATCCATACAGGCCCAAAGGTATCACATTAGGACACATACAAAAAAAGAAGAATATCAATGTACCATGTGCTCATCACAACATTATACAGATAATGCATTTGTAACTCATGTCTTAACACATTCAAGTGATACATGTTTCCCATGTATGGTTTGTGGAATACCATTAACAAGTGATGCCGAACGCGATGAACATTTAAAAACTCATGAACAAGATCGACCATACGGTTGCCATTTTTGTAAGAGACGTTTCCGTCAACATAATTTTCTCACCAATCACTTGAGAACGCATTGTCAATATCGTTGTGATTTCTGTCCCAACGATTTCAATACAACACAAGCACAACGTCGTCCTTATGCTTGTCCTGAATGTGAAATAAATCCGGAAGTTTTGCAGAAAGTCGAAAAGCAACGTTCAGTATCGGTTAAAGTTCATATTGACTCAGTTGATTCGGATATGGATGATGATAATGATACATTGTTTCCGGTTGCAAATGCTGGTAAACCGGATGAGACATCACATCGTTTACCATGCAAATTTTGTGGATCGACTTTTGCCAACAGTAATAATCTTATTTATCATATGCATAAAAAACATGGCATCGAAATGAGTGATATATCGCATGATAATAACGATACAAATTATGTTAAACCGGCTTCAACCCAatatgattttgaaaaattttttgtcaatgaAGAAACTATAGTTGAAAACCAAGTCAAAAATGAATTACTAGATGATGAAGAAgacgatgatgacgatgatgatgttgAATTTATGGGTGATTATGATGAAGAATATAGAAAACTACTTTTGGAAGAGGAATCAATATTAAGTAATGAGACACATGGTAGTAGTCAACCGATGATTAGCCAAGATATGCCGCAGCAGCAGGCAACAGATAATGAGGATGAGGCAGAAATTATTGGTGATGATGATGACAGTGAATATAATAAATTGCTATCTTTAAAAGAAGATTCTTTTGTTGGTAGTCAACAAATCATGGCCAAAACAATGAAAGTACGAGCCTATTGTCACATATGTGacttatattttcaaaatgatcAACGATATCGTAACCATATGATTAAACATACACAAGATGCACCATATAAATGCCCATATTGTGAAAAAAGATTTAAATCACATCAAGCTAGATTGTATCACACTAGAACGCATTCTAGAAGTGATGGATATCAATGTCCTATTTGCCCAATATCATATGGTACAGAATATCAATTTATTACACATGTCTTAACGCACGAAAATAAAACATGTTTTCCCTGTATGGTTTGTGGAAAAGTATTAACCAGTAATCCAGAACGCGATGAACATTTAAAAACCCACGCCGAAGAGCGGCCATATTCCTGTCAATTTTGTAAAAGACGTTTTCGTCTACAACATattttaacaaatcatttaaaaaaacattttcaataccGTTGTGATTTTTGTCCTATCAGTTTTCATTCAACACAAGCTCAACGTCGTCCCTACGCTTGTCCTGGGTGTGAAAAATTACCAGATATTGGACAAAGAATTGAAAAGGTTAATCCGGTAAAAAATGATGCTAATGAAATGGAAATGAATATGGACAGTTTAGCGAGTACTAGTAAAATGGCTGAGACATCATATAATGATACGAATTCGAGTAAAGTGGCTGTAACAATGTTTCGGTTTACATATGATAAGGAAGTTGTAAACTATGCACGGAATCCTGGTAGTACCCAAGATGATTTTGAATTATTTCTTTCCAATCATGCACAAAATACACAAAATAAGGAAATtactaatgaaaaaattattaaaaatgaaaaactagATGATTATGAAGAAGAAGATTATGATGATGAGGATGACTAtgaggatgatgatgatgatgacgatgttgAATTTATGGGTGATTATGATGAGGAATATAATAAATTACTTTCGGAAGAGGAATCAAACTTAAGCAATAGAGCACGCGAGAGTAATCAGCAAATGATGAGACAACAAATGCAGCAGCCATCAGATAATGCAGAATTTATTATTGGTGACGATGATAATAGTGAATTGCTATATTTAAAAGAAGATTCATATGTTGGAAATGATTCTGTTGGTAGTAGTAACAAACCAATAATGGCCAAAACAATTAATGTACGAGCCCATTGTAAACTATGTAATAGTTTCTTTCAAAATAGTGAACGTTATCGCAAACATATGTTTAAACATAGCCAAGCTGCACCATTTAAATGTCCATATTGTGAAAAAAGATTTAAATCGAAACCTGCCAGACGTTATCACGTTAAAACGCATACACTAAATGATGAATATAAGTGTCCGATATGTCCAATATCATATGGTACAGAATATCAATTTATAACACACGTCTTAACGCACGAAAGTGATACATGTTTTCCTTGTATGGTTTGTGGAAAAATATTAACCAGTAATCCGGAACGTGATGAACATTTACAAACCCACGCACAAGAGCGTCCATATTcctgtcatttttgtaaaagacGTTTTCGTCAACAAAATCTTTTAACTAATCATTTGAAAAAACATTGTCAATATCGTTGTGATTTTTGTCCTACCGATTTTCATTCGATGCAATTTCAACGTCGACCCTATGCGTGTCCTGAGTGTGAAAAATTGCCTGATATTAggcaaaaaattgaaaatcaacgaTCAATGTCGTTAATGAAATCGGAAATGTTAATGGATAGAGATAATGTAGCGAGTACTAGTAAATGGGCTGAAACATATCATGAAGGGAACTCTAGTAAATTGGCTGTAACAACTCTGCGTATTCCTTGCAGTTCTTGTCCAGCCACTTTTAAAAatattaataaaaaaaaatcaaaaagtgttaaaacacaagatgattttgaaatattttttgtcgatGAAGGCGCAGATAATGGTAAAATAATTATTGACGACGATGAGTATGAGAATGAAATATTAGATGCAGAAGATGACGAAGTTGAGTATATAGGTAATGATGACATGGAATACCATAAACTTCTATATGGTGATGATCAAACAAATATGGGCAATTATTATGATGATGATTATGATGACAATGGAGCAGTTGGTAGTAGTGGTCTACTCGTAAAGGCAAATAAACCTAATCCAAGTAATACGACTAAATCCAAGTCAACTTCTGGTCCACATATTTGTCCTTACTGTAATAAACGATTTAATTCATTTCAAGCCAAAAGTTATCATATAAAGGGTCATACCAAAAAAGACGAATTTCGTTGTACAATGTGTCCCATATCTTATCATACCGAAAATCAATTTATTACACATGTTCTTACTCATGAAACCGATACATGTTTTCCTTGCACGGTATGTGGCAAAGTCATGGGGAGTAATTCCGAACGAGATCAACATTTGAAAAGTCATGCAAAGACGCATCCATTTAATTGCGAATTCTGTAAGAGACTGTTtcgtaaacaaaattttatggcaAACCATTTAAGATCGCATTGTCAATATCGTTGTGATTTTTGtcaaactaactttaatacatcACAATCCCAACGGCGTCCATATGTATGTTCAGAATGCGAAAAATCTCCTAAAGTAAGACTTGAGGCAGAAAAACAACGTGCTGTACCGTATAAAACTAATACCAGATTTTCGGATAACGAATCAGAGGATGATTACGAAGCAAATAGTTCGGTCGAACGTATTCCATataatgataaaaaaatttcgaaaagtgATAAAACCCAAAatagttttgaaatattttttgttgatgAAGACAAGGAAGGCGTAGATAATGATACTACTATAATCTTGGATGATGACAATAATTATGATGATTTTGATGATGATCAGGATGAAATGGTGAATGCTGATGAAGATGAGATTGAGTTTATAGGGGATAATGATATGGAATACAATAAGCGTCTAGAACAAATAGACTCAAATATTGACAATTATTATGAAAATTATAAGGATGACGACGATGAAGCTGGTGGTAGTAATCTGCTAGTAAGAATAAACAAACCCCACCAAAGTAAAATGTCTAAATCAAAAGCAACTGGTCCACTTAAGTGTCCAtactgtaataaaaaatttaattctacCCAGGCCAGAAGTTATCATATAAGAGGTCATACCAACAAAGATGAATATCGTTGCACAGTGTGCCCTATAACATACCATACAGAAAATCAATTTATAACACATGTCCTAAGTCATGAATCCTATACATGTTTTCCTTGTATGGTATGTGGTAAAGTCTCACAAACTGATGCAGAACGGGATGAACAtttgaaaattcacgaaaaagaaCGACCATTTGGTTGCGATATTTGTAAGAGACGTTTTTTGAGAAACAGTTTTCTAATAAATCATTTAAGAACGCATTGCCAATATCGTTGTGATTTTTGCTTAAGCAATTTTCATTCATCGCAGTCTCAACGTCGTCCATATGTTTGTCAAAACTGCGATAAGTCATCTAATGTTAGGACTGACGCTGAAAAACAACGTTCAGTGCAGCCTAAAACTAATAATAAACCAAGTTTAGATAATGAGTCAGATGAAGACTCGGTCGATCGTATTGCTTGTAAATTTTGTCCAGCCACTTTTATTAGACAAAATAATCTTACTTATCACATGCAACGGAAACATGCAGCAGAATATAACCaaaaataa
Protein Sequence
METFVIKSEPPEFVESNRRITSGGGGDADAAARAVGEKIQETVSNVEKSLCGEIFVTNNAKKWTFTCSYCQKTTRDIGEFICHIQFKHLTGLYTDDDYGDDDKENELQRMGNTISNKEKQPVLPQTLIQSKSNDNTLLFPSIPTIAQVSSLASSNTPPTFANTNFEYSDSVDSIEHLSYEASSSQQHLKSASTSSNTPNPSKRQKIQANSKHKNSIGTKKKRNERTTNEQLQYYLNFCQIHPEIKSMKSESETSKLWKQLSDKINSMKGPTRTPKTWRSSLGHWKNQLHSRVRKEKAARLKAGFSSSAEDLNSFDQYAHRVLYNDDDNEILNSLPSEIVTEQQALFEQEESISLSSPYIQEDQKPTGEDLHLYLQEHHAILVDQKPITKYLDPSVFLNAQQGFEQQTSSSSSKKHKDHIKKETSKNVKNSYVKNRNPTQNDFEIFFVDDENDNGQTVKHESIGIDDEDDVESGGDNDEEYNKIFYGNDESDGGGDGEASGSGKQRRRTRQPFGITYCNLCDKHFQYHHQYRTHMNRHTQNTPYICPHCDKSFRSIQAQRYHIRTHTKKEEYQCTMCSSQHYTDNAFVTHVLTHSSDTCFPCMVCGIPLTSDAERDEHLKTHEQDRPYGCHFCKRRFRQHNFLTNHLRTHCQYRCDFCPNDFNTTQAQRRPYACPECEINPEVLQKVEKQRSVSVKVHIDSVDSDMDDDNDTLFPVANAGKPDETSHRLPCKFCGSTFANSNNLIYHMHKKHGIEMSDISHDNNDTNYVKPASTQYDFEKFFVNEETIVENQVKNELLDDEEDDDDDDDVEFMGDYDEEYRKLLLEEESILSNETHGSSQPMISQDMPQQQATDNEDEAEIIGDDDDSEYNKLLSLKEDSFVGSQQIMAKTMKVRAYCHICDLYFQNDQRYRNHMIKHTQDAPYKCPYCEKRFKSHQARLYHTRTHSRSDGYQCPICPISYGTEYQFITHVLTHENKTCFPCMVCGKVLTSNPERDEHLKTHAEERPYSCQFCKRRFRLQHILTNHLKKHFQYRCDFCPISFHSTQAQRRPYACPGCEKLPDIGQRIEKVNPVKNDANEMEMNMDSLASTSKMAETSYNDTNSSKVAVTMFRFTYDKEVVNYARNPGSTQDDFELFLSNHAQNTQNKEITNEKIIKNEKLDDYEEEDYDDEDDYEDDDDDDDVEFMGDYDEEYNKLLSEEESNLSNRARESNQQMMRQQMQQPSDNAEFIIGDDDNSELLYLKEDSYVGNDSVGSSNKPIMAKTINVRAHCKLCNSFFQNSERYRKHMFKHSQAAPFKCPYCEKRFKSKPARRYHVKTHTLNDEYKCPICPISYGTEYQFITHVLTHESDTCFPCMVCGKILTSNPERDEHLQTHAQERPYSCHFCKRRFRQQNLLTNHLKKHCQYRCDFCPTDFHSMQFQRRPYACPECEKLPDIRQKIENQRSMSLMKSEMLMDRDNVASTSKWAETYHEGNSSKLAVTTLRIPCSSCPATFKNINKKKSKSVKTQDDFEIFFVDEGADNGKIIIDDDEYENEILDAEDDEVEYIGNDDMEYHKLLYGDDQTNMGNYYDDDYDDNGAVGSSGLLVKANKPNPSNTTKSKSTSGPHICPYCNKRFNSFQAKSYHIKGHTKKDEFRCTMCPISYHTENQFITHVLTHETDTCFPCTVCGKVMGSNSERDQHLKSHAKTHPFNCEFCKRLFRKQNFMANHLRSHCQYRCDFCQTNFNTSQSQRRPYVCSECEKSPKVRLEAEKQRAVPYKTNTRFSDNESEDDYEANSSVERIPYNDKKISKSDKTQNSFEIFFVDEDKEGVDNDTTIILDDDNNYDDFDDDQDEMVNADEDEIEFIGDNDMEYNKRLEQIDSNIDNYYENYKDDDDEAGGSNLLVRINKPHQSKMSKSKATGPLKCPYCNKKFNSTQARSYHIRGHTNKDEYRCTVCPITYHTENQFITHVLSHESYTCFPCMVCGKVSQTDAERDEHLKIHEKERPFGCDICKRRFLRNSFLINHLRTHCQYRCDFCLSNFHSSQSQRRPYVCQNCDKSSNVRTDAEKQRSVQPKTNNKPSLDNESDEDSVDRIACKFCPATFIRQNNLTYHMQRKHAAEYNQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-