Basic Information

Insect: Pegoplata infirma
Gene Symbol: -
Assembly: GCA_963921195.1
Location: OY992540.1:97894282-97896360[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.3 2.9e+02 3.6 0.4 3 23 275 296 275 296 0.96

2 12 0.012 1 11.3 0.1 6 23 305 322 305 322 0.99

3 12 0.00023 0.019 16.7 6.2 1 23 328 350 328 350 0.99

4 12 3.8e-05 0.0033 19.1 0.8 1 23 357 379 357 379 0.97

5 12 0.045 3.8 9.5 1.0 6 23 440 457 440 457 0.99

6 12 0.00016 0.014 17.1 1.1 1 23 463 485 463 485 0.97

7 12 2.9 2.5e+02 3.8 0.2 2 23 514 536 513 536 0.92

8 12 0.0012 0.11 14.4 0.1 6 23 545 562 545 562 0.98

9 12 0.00021 0.018 16.8 3.9 1 23 568 590 568 590 0.98

10 12 0.0011 0.096 14.5 1.2 1 23 597 620 597 620 0.94

11 12 0.0097 0.83 11.6 4.1 1 23 626 648 626 648 0.93

12 12 0.053 4.6 9.2 0.6 3 23 656 676 655 676 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.3	2.9e+02	3.6	0.4	3	23	275	296	275	296	0.96
2	12	0.012	1	11.3	0.1	6	23	305	322	305	322	0.99
3	12	0.00023	0.019	16.7	6.2	1	23	328	350	328	350	0.99
4	12	3.8e-05	0.0033	19.1	0.8	1	23	357	379	357	379	0.97
5	12	0.045	3.8	9.5	1.0	6	23	440	457	440	457	0.99
6	12	0.00016	0.014	17.1	1.1	1	23	463	485	463	485	0.97
7	12	2.9	2.5e+02	3.8	0.2	2	23	514	536	513	536	0.92
8	12	0.0012	0.11	14.4	0.1	6	23	545	562	545	562	0.98
9	12	0.00021	0.018	16.8	3.9	1	23	568	590	568	590	0.98
10	12	0.0011	0.096	14.5	1.2	1	23	597	620	597	620	0.94
11	12	0.0097	0.83	11.6	4.1	1	23	626	648	626	648	0.93
12	12	0.053	4.6	9.2	0.6	3	23	656	676	655	676	0.96

Sequence Information

Coding Sequence: ATGGCTATGGAGTTGTGTATAGTTTGTTTAAAGTCTACTGAGGACATCCTTTCACGCATAAACATTCAATCGAGCGAATGGCAAGAATGCAATATACAACGTATCATAGAGAAACATTTATGGTGGTGGTATCTAAAAAAACCTGCAACCAGTGGAAGCTCATTACAATGTATTTGCCGACAATGTTGGCTGGAGCTATCATCATTTCACAATTTTTATTTAACAGTTCAAAAAGTtcacaatcagtacatattaaTGCCCACAATCTATGAAATGACAGAAATTAATAAAACTGCAGcacaacagaaaaaaataaaacaagaaagtgAAGCTCACACTGATACTTGTCCAATGGAAGACATAAAgccattaaataaaaaacaacggGGTAGAAAGCAAAATTATAATTGCAATAGTATTCAAACTGATGAACTTCATATTGTGGACATTAAAAATGAAGTTAATTTGGATAAAACTGGtaataaaaaagaagaaaaaaatgcaGATCAAGTTGATGATGTTAACGAGAACATATCCACTATCACATTACCtacaaaaaatgtagttttggttCCGAAAACTTCCAACGAAAACGATTGTGAGGCCAAGGAAGGGGATGTCACGGTTAGTGATGATAATAGCGACGACACCCTGGAAGCGACAACAACACCTGGACGAAAAAGTGGACGTAAAACAACTAAAACTAAACCTATCGCAAATAGAAAACAAAGAGGAGTTTCAACCAATGCTAACTCTGCAAAGGAACAACTGTCAGCTAAAGAATGTGAAGAATTATTTAAGGAAACTGGATATGAGCTAGGGTGTAGTATTTGTCAAGTTTCTATTCCTGATTTTCGTACTCTCAGAATGCACTTTAATATAAAACATAAAACTCCTGTTTATAGTATGTGTTGCGGAAAAAAGTTTACCGAACGAGGTTTGCTTATAGATCATTTAAATGTGCACAAGAATCCGGAATATTTTAAATGTCAGcgttgtaataaaacatttaaaatgcgcTCATGTTTAGAATCTCATGTAAAAACTCACGAGCCACGTGAACGTAAATTTAATTGCGAAGAATGTGAGAAATCCTTTTTTAATAGACATCTTCTTGCTGCTCACATGGTAGTGCACGATCCAGAAAAAGATAGTGTTAGAAGGCAGGAACTATCGGATGAAGCTTGCGAAGAACTTTTTAAAGAAACTAATTATAAACTTGAGTGCAGTATTTGTCAAGTGGCTCAATATGATTTTCGAACTCTAACAGCACATTTCAAAAACAATCATAATAACATTCCTACTTATGCCATGTGTTGTGGAAGAAAGTTTACTCAACGATGTTTTCTTATAGATCATTTAAATGTACACAAAAATCCTAAATACTTTAAATGTCAGCCTTGCAAGAAAACATTTACAACGCGTGGTGTATTGGAAAGACATTTAAGAGCTCACAAGACTCCGGGAGAACCTCTTAAAAAGCAACCAATTTCCGCTGAGGATTGCGAagaaatatttagaaaaactCAGTATAAACTTGAGTGTAATATTTGCCAAGAGCCTCAAGTAGACTTTCGAACTCTTAAAGTCCATTTTAATAAGGAACATAAGATTCGTGCCTATGCACTGTGTTGTGGAAAACGATTTGTCCAACAAAGTTATCTTATAGATCATTTAAATTTGCATACAAACTCAAAACATTTTAAATGTCCGCATTGCAACAAAGTATTGGCATCACGTCGTTGCTTACAAAATCACGTCAAAATTCATGAGACTCGTGAACGAAAATATAGTTGCGATGAATGTGATAgatccttttttaaaaaactgtttcTGGAACGTCATAGATTAGCACTTCACGTAACTGACAAAACTTACCAATGTAGTCAGTGTGACAAGAAATTTGCATCGAAATATCTTCGTCGAATACATGAATATCATCACAATAGAACAATgcctaaaatttgtaatttatgtcaaaaatattttcgcggAGGCCCTTCTTTTGAACGTCATATGTTCTACCATAAAACCCTGGATCAAACTATTACACCTATTAAAAGTGAACCCAAATTTTGA
Protein Sequence: MAMELCIVCLKSTEDILSRINIQSSEWQECNIQRIIEKHLWWWYLKKPATSGSSLQCICRQCWLELSSFHNFYLTVQKVHNQYILMPTIYEMTEINKTAAQQKKIKQESEAHTDTCPMEDIKPLNKKQRGRKQNYNCNSIQTDELHIVDIKNEVNLDKTGNKKEEKNADQVDDVNENISTITLPTKNVVLVPKTSNENDCEAKEGDVTVSDDNSDDTLEATTTPGRKSGRKTTKTKPIANRKQRGVSTNANSAKEQLSAKECEELFKETGYELGCSICQVSIPDFRTLRMHFNIKHKTPVYSMCCGKKFTERGLLIDHLNVHKNPEYFKCQRCNKTFKMRSCLESHVKTHEPRERKFNCEECEKSFFNRHLLAAHMVVHDPEKDSVRRQELSDEACEELFKETNYKLECSICQVAQYDFRTLTAHFKNNHNNIPTYAMCCGRKFTQRCFLIDHLNVHKNPKYFKCQPCKKTFTTRGVLERHLRAHKTPGEPLKKQPISAEDCEEIFRKTQYKLECNICQEPQVDFRTLKVHFNKEHKIRAYALCCGKRFVQQSYLIDHLNLHTNSKHFKCPHCNKVLASRRCLQNHVKIHETRERKYSCDECDRSFFKKLFLERHRLALHVTDKTYQCSQCDKKFASKYLRRIHEYHHNRTMPKICNLCQKYFRGGPSFERHMFYHKTLDQTITPIKSEPKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -