Basic Information

Insect: Pegoplata infirma
Gene Symbol: -
Assembly: GCA_963921195.1
Location: OY992539.1:27936385-27938502[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.011 0.9 11.5 3.6 2 23 286 307 285 307 0.97

2 9 0.0015 0.13 14.1 2.7 1 23 313 337 313 337 0.97

3 9 0.00015 0.013 17.2 1.8 1 23 342 367 342 367 0.97

4 9 3.7e-05 0.0031 19.2 0.9 1 23 376 398 376 398 0.97

5 9 1.1e-05 0.00095 20.8 0.5 1 23 406 430 406 430 0.97

6 9 0.0017 0.14 14.0 0.6 1 23 436 458 436 458 0.97

7 9 0.0028 0.24 13.3 1.5 2 23 465 487 464 487 0.94

8 9 0.074 6.3 8.8 1.5 1 23 493 515 493 515 0.97

9 9 4.3e-06 0.00036 22.1 0.9 1 23 521 543 521 543 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.011	0.9	11.5	3.6	2	23	286	307	285	307	0.97
2	9	0.0015	0.13	14.1	2.7	1	23	313	337	313	337	0.97
3	9	0.00015	0.013	17.2	1.8	1	23	342	367	342	367	0.97
4	9	3.7e-05	0.0031	19.2	0.9	1	23	376	398	376	398	0.97
5	9	1.1e-05	0.00095	20.8	0.5	1	23	406	430	406	430	0.97
6	9	0.0017	0.14	14.0	0.6	1	23	436	458	436	458	0.97
7	9	0.0028	0.24	13.3	1.5	2	23	465	487	464	487	0.94
8	9	0.074	6.3	8.8	1.5	1	23	493	515	493	515	0.97
9	9	4.3e-06	0.00036	22.1	0.9	1	23	521	543	521	543	0.97

Sequence Information

Coding Sequence: atgttttcaaaggatttaaaacaaatattatgTCGAACctgtttaataaatttgtttacaaaacaaacaaaattggAATTATACCATATATTTGCCACTGAGGAGTTGGCCAAAAAGTTAATGTTATGCTCTTCCCTGACCGTTGAGGACAACGATGAATATCCCCAGCATGTTTGTGTGGAttgttataataaaattttacaattttatgagTTCCAAGAAATGTGCAGCAAGTCTTTGGAGAAGTTTAGAGAACTTTTGGAAACAGCAAGCAATGTTAAACAAGAAAACCCTATAGAGGTTTTGGAAGAAAATTATGCATTGACTGAagataaaaataataattgtggACGGGATAACAAACAAGTGATCGATGTAGTAGTATGTACCGAGCAGGTTGAACAAAATGATACATATACTTCGCCTTTAAAAAAAAGAGGACGACCTCCCAAGCAAAAAGTTGAGGAAAagttaaatagaaaacattttaaaacaaaagGAAGCTGCGGCGATGTAAAAAATACTAAAGTCGAGAATGTAGAATTAGAAAAAGAAGTTGTGGAAAGTGCTCCCATATCTTTTATATCTGAAAATGAATGTGAGGTTATGTTAGAGATTGAGGTTATATCAGACATGGCCCACTCAACGAAAAATGTTAGTAATATTAATGAAGGACATGAATCTTTAGAAGCTGAATTGGTAAACGAcagtcaaataaaacaaaatgttaaTATTAACAAACAGAATATGGATCTGATTAAAGAAGCTGTGCCAAAGGAAGATATGACAATATCAGAAGACTCTGAAAGTGACTCATCCACCTACGAAAGAAAATATCCCCGCAAAATTGCCCTCAAATGTGATCGATGTGAAAAATCATTTAATGTACAACATCGTTTCGAAGCCCATAAAAGACAACATGATGGTCTATCGCCATATTCCTGCACATTTGAGGGTTGTGAGCGTACCTTTAATCGTTGGCATTATTACAATGAACACCTTAAAGATCATAAAGGTGAACTACATAAATGTGATGTGGACGAATGTGAAAGAGTCTATAAAAATAAATCTGCCCTTAATATCCACAAACGTAAATATCATCAACTGGGACCCGAATTAAAGACTCATATGTGTGAAGTTTGTGGTAAAGTTTTTAAATCTTCAGCGGTACTAAACGAACATCGTTATACACATATTGACAGGACCCAGCTACCCTATGTATGTGAAGAACCTGATTGTCCGAAAAGATTTTCCACTAAAGAAAagctaaaaattcataaaatgcgCCATGCTGGTATTAAGAATTTTATTTGTCCATATTGTGGTATGCGGAAAACAACACGTAATGAATTGAAGATACACATCAATTATCATACTCTGGAAAGAACTTGGCCTTGTCGTTTTTGTACGAAAGTTTGTAATAGTGCTGGCAACTTAAAGACACATGTAAAGAATATGCATGAAAGGGCTAAAGATTTTGCCTGTCGTTTCTGTGAACGTACTTTTGCCAAGGCTGATACCAAAAAATATCACGAAATGACACATACGGGTGAAAAACCACATGAGTGTAAGGAGTGTGGTAGACGATTTGTGCAACCGGCCGCACTAAGGACTCATAAGAAGATACATTTGAGAGAGAAAACgaaaatgaacaaaaatgaaaatCAAGAAGGATGTGAAGAAGGAAGTAAAGAACAAAATATATTACAGTCTTCAAATGAAAAGCAATCAATTGAGGAAACTGAGGCTATGGTAGCTgatattttaagtgataataatacaaatgcaaaaaatatttaa
Protein Sequence: MFSKDLKQILCRTCLINLFTKQTKLELYHIFATEELAKKLMLCSSLTVEDNDEYPQHVCVDCYNKILQFYEFQEMCSKSLEKFRELLETASNVKQENPIEVLEENYALTEDKNNNCGRDNKQVIDVVVCTEQVEQNDTYTSPLKKRGRPPKQKVEEKLNRKHFKTKGSCGDVKNTKVENVELEKEVVESAPISFISENECEVMLEIEVISDMAHSTKNVSNINEGHESLEAELVNDSQIKQNVNINKQNMDLIKEAVPKEDMTISEDSESDSSTYERKYPRKIALKCDRCEKSFNVQHRFEAHKRQHDGLSPYSCTFEGCERTFNRWHYYNEHLKDHKGELHKCDVDECERVYKNKSALNIHKRKYHQLGPELKTHMCEVCGKVFKSSAVLNEHRYTHIDRTQLPYVCEEPDCPKRFSTKEKLKIHKMRHAGIKNFICPYCGMRKTTRNELKIHINYHTLERTWPCRFCTKVCNSAGNLKTHVKNMHERAKDFACRFCERTFAKADTKKYHEMTHTGEKPHECKECGRRFVQPAALRTHKKIHLREKTKMNKNENQEGCEEGSKEQNILQSSNEKQSIEETEAMVADILSDNNTNAKNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -