Pinf042231.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pegoplata infirma
Gene Symbol
-
Assembly
GCA_963921195.1
Location
OY992540.1:225300142-225311479[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 2.5e-06 0.00022 22.8 4.6 2 23 357 378 356 378 0.97
2 16 0.059 5 9.1 6.7 1 23 383 405 383 405 0.98
3 16 0.0012 0.099 14.5 1.4 1 23 411 434 411 434 0.97
4 16 0.0078 0.66 11.9 6.4 1 23 440 463 440 463 0.97
5 16 0.046 3.9 9.5 2.2 1 23 496 519 496 519 0.96
6 16 0.00021 0.018 16.8 1.9 2 23 565 586 564 586 0.96
7 16 0.00067 0.057 15.2 0.7 2 23 597 618 596 618 0.97
8 16 0.00093 0.079 14.8 0.9 1 23 623 645 623 645 0.97
9 16 0.014 1.2 11.1 2.1 2 23 652 674 651 674 0.95
10 16 1.8 1.5e+02 4.5 0.1 2 20 743 761 742 762 0.94
11 16 5.2e-05 0.0045 18.7 3.2 1 23 816 839 816 839 0.97
12 16 0.00032 0.027 16.2 2.7 1 23 857 879 857 879 0.97
13 16 0.0005 0.043 15.6 6.6 1 23 884 906 884 906 0.99
14 16 0.00086 0.073 14.9 0.9 1 23 912 935 912 935 0.97
15 16 0.0032 0.27 13.1 5.4 1 23 941 964 941 964 0.97
16 16 0.17 15 7.6 2.1 1 23 997 1020 997 1020 0.96

Sequence Information

Coding Sequence
ATGAATAAAACCAAATATAACTGTTATATCTGTAAAATCAAATACAATAAATTAGGTCCGTTTAAAGGATTCATAGCACCACATGATGTTTCGAAACGTGAACGTTGGGGTATCTCTTGTGGCGTTAGTTTACCAGAAAATGCTAGAGTCTGCGACAAGCATTTTAGACCAAAGGATTTTATTATTAAGCCTAATGAACACAAATTGGCCAGATTAATGCCCGGAGCTTTACCTAGACCTGGACCAAATCATGCAAGTAATCTTATAAAGAAACGACCAGAAGTTGGAAACATCAAAGATAAATGTTATTTGGAAGAACCTCTTATAGAGATTATACCAGAACCAgATATAGCTGTACCTTCTCAAAATCTGCAGGGTTTAAGTACTATAACCCAAACTCCTTTAAATGTTATATTTTTAAATCAACGACCGGATATGGAGCATGTTGATCTGCCAAGCACGAATTTTAAAGTTTGTCCCAATACTAAAGTTTCTAACAAATCCGTACAAACAGATGTTGGACATATACGTACATGTGGTTATATAGAAGTTACCACGGATAATGTGGTATTTACTATGAATTGCTTttattgtgaaaaatattttcccATCTTTAGTTGGGGTGAATTTGTGACTCACATAAGAGAAATTCATCGAATCGaggaaaaaaattcacaaaaagaaTTAATTGAACAAGAAAACCCTTTACCGTCTACTAGCAAAGGTCCAGTTTGCAAATTGGAATTAGATTTAAAGCAGAAAAGTAATATTAAAGTCAATATTAACACTCAACAAATATGTGATGAACAAATGTCTTTAAAAAATACACCAGAACCAGAATTGGACCTAAAGACTTCAGAGGACAACGGTTTTATTGACAACTCAAAAGATTTTACGGTTATTGGAAACGAATATAACCCAATTGAGTTTGGTAACACTGATGATAATGAAATAACTGATTTAATCTTCTTTCCGAGCGAAAATGATTTGCAGGCTCACCAACTACTTAATCACAAAAATGTAGAGCCTTCATCAGTAGATGAACCAGAAATAGACTATCAAAGAACCGTATGCTTAATTTGCAATAAATCATTTAAATACTCACATAATTATCGTAGACATATGAGAACACATAAACCACCAGCTTTTAAATGTCATATATGCGAAAAAGAGTTTTGCTGGAAGGATAGCTTTAAATACCATCTGAAATTGCATAGCAATCAACGTGATTATGTTTGCGAATTCTGTGGAGCATCTTTTATTCGTCATAATCTTTTGTTTGATCACAAAAAAAGGGCTCATTCAGAAGACAAACATTATGTTTGTCAGATATGTGACTACACCTGCAAAACTGCTACTTATTTATGTTTGCATCGAAAAAAGTATCATTTAGTTTTAGAGGGCACAATTGAAGACTTATATAAAAAACGTCGAAATGGTATACAATTTGAATCTATAACAGATCCTGATACGAACGAAATTCGTTTTAAATGTGATTTATGTGGCAATACTTATAAGTTTTATGCGGGTGTATGCCGCCATAGACGTGCAGACCATGGCATAttTACAGATATTGATTATTTATCAGACAATAGCAAAACTGATACTGATGAAGAGTCTCGTGAGATTAAAGAAAATCACATAAAATTAAAGACCAAACCAAAAGCAAGTCAAAAAAAGAAACTAAAGTTACCCTGCTATCGCTGTGAAAAATTCTTTTCTGATTCAGACCAATTACATGCTCATCAAAAAAGTCACACTGATCAACGGCAAGAGTCTGAAGGGTGGGTTTGTTCGatatgcaataaaacatttaaagcaAAACAGCGTTATCTGAACCATATGAATGTTCATAGACCACCAATACATAAATGTGATATTTGCGGCAAAGGATTTAGTTGGGAGGGTAGTCTTAAGTACCATCTAAAATTACATACTAATGAACGTGATCTTATGTGTGAACTATGTGGAGCTACATTTATACGACATTCTCTTTTTTATGATCACAAAAAGAGGAAACATTCAGATGAAAAAAATCATGTTTGTCAGATATGTAAATTTACCTGTAAAACCAGTACAATTTTATGTTTGCATCGTAAAAAGTATCACATGGTTTTGGAGGGCACAAATGAAGAACTTGAGAAAACTAGTTATTCGGCTGGACGTCGTAAAATTCCTTCGAAATATGAATTTATATGGGATCCTGTTACGAAACAAAAACGTATCAAGTGTGATTTATGTGATAACACCTATGCACTGCATGCAGGTTTAAGTCGTCATAGAGGTCAAtttATAGAGTTTGATTCTTTACCTGGTAAGGACTACGATACTGATGATTGCTTAAACGCCATCGAAAAAGATACTCATTTAAAGGGCAAAAAAACCCCAAAAGCTAAAACAAAAGCAGAGTGTAAATCAAAAGCAAGGGTCAAAAAGGATTCAAAATTCCCCTGCTATCTTTGTAAGAAATTCTTTTGTAATAAAGATGATTTACAGGCTCACCAACTAACAAGTCATAACACCGTCGATTCAACATCAGTAAATCAATCTGGAACAGACGATCGAAAACATGTGTGTTTAATTTGCAATAAAACATATAAATACTCTCAGGGTTATCGTATACATATGCAAACACATAAGCCACCAGCTTTTAAATGCCATATATGCGGTAAAGAGTTTTGCTTTGAGGATAGCTATAAATACCATCTGAAAATGCATACCAATCAACGTGATTTTGTTTGTGAACTATGTGGAGCTACTTTTATTCGTCATAATCTTTTATATGATCATAAAAGAAGAGCGCattcagataaaaaaaattatgtttgtcagATATGTGACTACACCTGCAAAACTGCTACTGAGTTGTGTTTGCATCGAAAAAAGTATCATTTAGTTTTAGAGGGCACAATTGAAGACTTATATAAAAAACGTCGAAATGGTATAAAATTTGAATCTATAATAGATCCTAATACAAACAAAACTCGTTTCAAATGTGATTTATGTGAcaatacatataatttttatgCGGGTGTATGCCGTCATAGACGTGCAGACCATGGCATAGTGGCCAACAGAAAAAAACATGTATGGAAAAAAGGCCCACCaaataaaaaagtcaaaatcgaAACGGATATACATAAATAA
Protein Sequence
MNKTKYNCYICKIKYNKLGPFKGFIAPHDVSKRERWGISCGVSLPENARVCDKHFRPKDFIIKPNEHKLARLMPGALPRPGPNHASNLIKKRPEVGNIKDKCYLEEPLIEIIPEPDIAVPSQNLQGLSTITQTPLNVIFLNQRPDMEHVDLPSTNFKVCPNTKVSNKSVQTDVGHIRTCGYIEVTTDNVVFTMNCFYCEKYFPIFSWGEFVTHIREIHRIEEKNSQKELIEQENPLPSTSKGPVCKLELDLKQKSNIKVNINTQQICDEQMSLKNTPEPELDLKTSEDNGFIDNSKDFTVIGNEYNPIEFGNTDDNEITDLIFFPSENDLQAHQLLNHKNVEPSSVDEPEIDYQRTVCLICNKSFKYSHNYRRHMRTHKPPAFKCHICEKEFCWKDSFKYHLKLHSNQRDYVCEFCGASFIRHNLLFDHKKRAHSEDKHYVCQICDYTCKTATYLCLHRKKYHLVLEGTIEDLYKKRRNGIQFESITDPDTNEIRFKCDLCGNTYKFYAGVCRHRRADHGIFTDIDYLSDNSKTDTDEESREIKENHIKLKTKPKASQKKKLKLPCYRCEKFFSDSDQLHAHQKSHTDQRQESEGWVCSICNKTFKAKQRYLNHMNVHRPPIHKCDICGKGFSWEGSLKYHLKLHTNERDLMCELCGATFIRHSLFYDHKKRKHSDEKNHVCQICKFTCKTSTILCLHRKKYHMVLEGTNEELEKTSYSAGRRKIPSKYEFIWDPVTKQKRIKCDLCDNTYALHAGLSRHRGQFIEFDSLPGKDYDTDDCLNAIEKDTHLKGKKTPKAKTKAECKSKARVKKDSKFPCYLCKKFFCNKDDLQAHQLTSHNTVDSTSVNQSGTDDRKHVCLICNKTYKYSQGYRIHMQTHKPPAFKCHICGKEFCFEDSYKYHLKMHTNQRDFVCELCGATFIRHNLLYDHKRRAHSDKKNYVCQICDYTCKTATELCLHRKKYHLVLEGTIEDLYKKRRNGIKFESIIDPNTNKTRFKCDLCDNTYNFYAGVCRHRRADHGIVANRKKHVWKKGPPNKKVKIETDIHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-