Basic Information

Insect: Pegoplata infirma
Gene Symbol: -
Assembly: GCA_963921195.1
Location: OY992540.1:87263004-87272320[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0058 0.49 12.3 0.3 2 23 268 290 267 290 0.97

2 18 1.7e-05 0.0014 20.3 0.8 1 23 311 334 311 334 0.97

3 18 0.0024 0.2 13.5 3.4 1 23 343 366 343 366 0.95

4 18 0.0027 0.23 13.3 2.8 1 23 378 400 378 400 0.97

5 18 4.3 3.7e+02 3.2 0.2 2 23 436 457 435 457 0.90

6 18 8.4e-05 0.0072 18.1 1.0 2 23 464 486 463 486 0.96

7 18 0.22 18 7.3 0.1 2 23 493 515 492 515 0.95

8 18 0.0048 0.41 12.5 1.1 2 23 518 540 518 540 0.96

9 18 0.013 1.1 11.2 2.6 2 23 547 568 546 568 0.97

10 18 0.71 61 5.7 4.2 1 23 571 593 571 594 0.95

11 18 0.14 12 7.9 0.4 2 23 601 623 600 623 0.96

12 18 0.00019 0.016 17.0 0.2 3 23 647 667 645 667 0.96

13 18 0.083 7 8.6 1.6 1 23 673 696 673 696 0.96

14 18 0.06 5.1 9.1 0.4 2 23 703 725 702 725 0.96

15 18 9.8e-06 0.00084 21.0 1.9 3 23 760 780 759 780 0.98

16 18 0.0003 0.025 16.3 4.8 1 23 786 809 786 809 0.97

17 18 0.0055 0.47 12.3 2.6 1 23 833 856 833 856 0.94

18 18 0.001 0.086 14.7 1.0 2 23 859 881 859 881 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0058	0.49	12.3	0.3	2	23	268	290	267	290	0.97
2	18	1.7e-05	0.0014	20.3	0.8	1	23	311	334	311	334	0.97
3	18	0.0024	0.2	13.5	3.4	1	23	343	366	343	366	0.95
4	18	0.0027	0.23	13.3	2.8	1	23	378	400	378	400	0.97
5	18	4.3	3.7e+02	3.2	0.2	2	23	436	457	435	457	0.90
6	18	8.4e-05	0.0072	18.1	1.0	2	23	464	486	463	486	0.96
7	18	0.22	18	7.3	0.1	2	23	493	515	492	515	0.95
8	18	0.0048	0.41	12.5	1.1	2	23	518	540	518	540	0.96
9	18	0.013	1.1	11.2	2.6	2	23	547	568	546	568	0.97
10	18	0.71	61	5.7	4.2	1	23	571	593	571	594	0.95
11	18	0.14	12	7.9	0.4	2	23	601	623	600	623	0.96
12	18	0.00019	0.016	17.0	0.2	3	23	647	667	645	667	0.96
13	18	0.083	7	8.6	1.6	1	23	673	696	673	696	0.96
14	18	0.06	5.1	9.1	0.4	2	23	703	725	702	725	0.96
15	18	9.8e-06	0.00084	21.0	1.9	3	23	760	780	759	780	0.98
16	18	0.0003	0.025	16.3	4.8	1	23	786	809	786	809	0.97
17	18	0.0055	0.47	12.3	2.6	1	23	833	856	833	856	0.94
18	18	0.001	0.086	14.7	1.0	2	23	859	881	859	881	0.95

Sequence Information

Coding Sequence: ATGAATCAAAAATACAAACAGAATTTATTGAAGAACAACCGCAAACAAAAAAGTTCATCTCTCCACACCGAGTCCCATACGGAAATCCACTTGGGACAGGAAGACAAAAAGATAAATACAGAAGATAAGAACCATTTTCCAGAATCTTACCTAAACGATAGTTCCTTATTTGTGGATGATGACGATAaacatttaaatttaacaaatattaaaGAAGAACTTGATTCCGATAGCGAATTTATAAGTATTTTAGAAGATAAAAATCCTAATGATATATCTAAAACTTTTAAAGAAAAGCGTTGTTTAAAAGTGCACTGCAAAAGTCGTAAACCATGTCGACGTCCATCTAATGCTAATTATTTTATTAATGACGCTGAAGAAACAAGAAGTAACTCAGTTAATATAGTTTATTCTGATCAAGTGGAACATCTGTCATTTGAAGATGTTGAAACTGGGAATCTAGAAGAGATAACAGTTAAAAATGAAATTGAAATATGTAATACTGAATTTATATATGATGAAGCCATTGTAAATGCAGCTAAACATAAAGACGATAATTCGGGACAACAAGTTAAAACTATGAACTTTCATGACGTTGGTTTAAAAGTAAAACGTAAAACTTTGAACTTCCATGAAAGTAATGTCGTAGATACTAAGCAAGTGACAAATGTGTCTAAAACTGCTAACATTATCCACATAAATGATGGCCACCAACTACTACAAATCAGTGAAAAGCCCTCAAAATCAGAAAATCTAAtaaattcaaaatataaaaacaaaaagtttttactgaCAGATAATAAATGTGCCGTCTGTCAAAAGATATTCGATGTACAGCAAACACTTTTAGAACATCTCCAAACATATCATAATAGTTGTCAAGATGAACATCAATCAAATACACTTAATTCGAGCATTCCGAAGACAAAATATAATTGTGAATATTGTTCCAAGATCTTTTCACTAAAAGACAGCTTGAAAACGCATATAAAAGTTGAACACTCCACTAGAGATCGACCTTTACAATACCGCTGTTCTTTGTGTAACAAAacgtttaaatttataaatagtTTAAAATATCACCAAGAGTATACTCATAAAAATTTGACAAATCGagatttatcaaaaaaatataattgcgaATTTTGTAGCAAGTCGTTTAATCACATGCAAGCCTTGAAATATCATTTATTAATTCATACTGGTGAAAAACCTTTCAAATGTTCTTTCTGTCAAATATGCCATAGACTTAAAACGGGCTTAATTATGCATCAAAAGAGAAAACATATCATAAGTGAAGATTTAAAATGTATAAAATGTCTTATATATTTTATAAGTCAAGAAACTTTGGATAGTCATTTATTAATTCATGCTGGTGAAAAGCCTTTGCAATGTTCGTTCTGTCCAATATCCTTTTCAGATAGAAAGTCCTTAATTGTGCATCAAAAGAAAAAGCATTTCATAAGTAAAGATTTAAAATGTAGTATATGtcgtatatattttttaaatcaagAAGCTTTGGAAAGTCATTTATCAATTGATCATACTGAAAAATGTTCGTTCTGTCAAATATCCTTTAAAGATAAATGGAAATTAATCGGGCATCAAAAGCAGGATCATGCCATAAGTAAAGATTTAAAATGTACTAAATGTCATATATATTTCTTAAATCAAGAAACTTTGGAACGTCATTTATTAACTCACACTGGATTCAACTGTTCGTTCTGTCAAATATTCTATATGAATAAGACACGCTTAATTAGTCATCAAGAGAAACATCATGTCACAAGCAAAGATTTAAAATGTAGTAATTGTCAATTATATTTTGTTAATCAAGAAATTTTGTCCCTTCATATTAATACGACCCATATTAATACGACCCATACTAAACAAATTATCAATGTTgttgatgcaaaagaattatcaaGAAACACTATTTGTGAATTTTGTGGCGAGGAGTATAGTAGTAATCCTACCTTAAAGCGCCACTTAAAAATCCACACTAAGGAAAACCCCTTTTCCTGTTCATGGTGTCAAATACCATATAAAGATAAACGATCCTTAATTTTCCATCAAAAGCGTAAACATAACTTTAGCCACGATTTAAAATGTAGTAATTGCGATATATATTTTCCAAATCAACAAATCTTATCTATGCATATTAAAACGACTCATAAAGATGATAAGCATTctcaaactattttcaaacaatatttgctTAGCAAGGACAAAAATTGTGATTTTAATTTATCTAAAGATTTAACAAAGGGAAATATTTGCAAATATTGTCACAAGTCGTTCCGTGTCCAGAGTGCATTGGATGTCCACTTAAGAACTCATACTGGTGAAACACCATTTTCCTGTTCTATATGTAAAAGATCATTTAAAGCAAATCACAgcttaaaaaatcatttaaagaAAACTCATAACATTGGAGAGGATTTGCCTATTAAAAAACCGCCGAAAAAGAATACATATGAAAAAGAAGAATGCCCCTACGCTTGTTctttgtgtgaaaaaaaatttaagcaacaAATTAGTTTAGATTCGCATCATCAGCAAACCCATATAAATGTTTGTCAATTATGTAATATGACATTTACCAGCAAACCTAAATTAACAATTCATACAAGATTACAACATAATGCAGGAGGATCTTTTAACACTTGTCACAGCAAACaagttgcaaaaaaatttaaaaatttaaaatcaaatattGATTCATCATCGAATTCCGTTGATAGCAATGAAATTGGAGACAGAAAAACTGATTCTGAGCTCTCGAAAGATTCTTGTGAAACCACAAGTACACAAGATGCTTATAACGTTGAGGAGGAAGAATTTATGGAAAATAACAAATCTGTAGATACTATAAATGTTATGGAAATAACTAAAACTGAAGATCATTCACTGATCAAGGATTTGCAACAATCGCAAGTAGTATTTATACAAAAGGAAGATATAAAGTTTGTTGTTGCTCCCATGAAGAAAAAGTGA
Protein Sequence: MNQKYKQNLLKNNRKQKSSSLHTESHTEIHLGQEDKKINTEDKNHFPESYLNDSSLFVDDDDKHLNLTNIKEELDSDSEFISILEDKNPNDISKTFKEKRCLKVHCKSRKPCRRPSNANYFINDAEETRSNSVNIVYSDQVEHLSFEDVETGNLEEITVKNEIEICNTEFIYDEAIVNAAKHKDDNSGQQVKTMNFHDVGLKVKRKTLNFHESNVVDTKQVTNVSKTANIIHINDGHQLLQISEKPSKSENLINSKYKNKKFLLTDNKCAVCQKIFDVQQTLLEHLQTYHNSCQDEHQSNTLNSSIPKTKYNCEYCSKIFSLKDSLKTHIKVEHSTRDRPLQYRCSLCNKTFKFINSLKYHQEYTHKNLTNRDLSKKYNCEFCSKSFNHMQALKYHLLIHTGEKPFKCSFCQICHRLKTGLIMHQKRKHIISEDLKCIKCLIYFISQETLDSHLLIHAGEKPLQCSFCPISFSDRKSLIVHQKKKHFISKDLKCSICRIYFLNQEALESHLSIDHTEKCSFCQISFKDKWKLIGHQKQDHAISKDLKCTKCHIYFLNQETLERHLLTHTGFNCSFCQIFYMNKTRLISHQEKHHVTSKDLKCSNCQLYFVNQEILSLHINTTHINTTHTKQIINVVDAKELSRNTICEFCGEEYSSNPTLKRHLKIHTKENPFSCSWCQIPYKDKRSLIFHQKRKHNFSHDLKCSNCDIYFPNQQILSMHIKTTHKDDKHSQTIFKQYLLSKDKNCDFNLSKDLTKGNICKYCHKSFRVQSALDVHLRTHTGETPFSCSICKRSFKANHSLKNHLKKTHNIGEDLPIKKPPKKNTYEKEECPYACSLCEKKFKQQISLDSHHQQTHINVCQLCNMTFTSKPKLTIHTRLQHNAGGSFNTCHSKQVAKKFKNLKSNIDSSSNSVDSNEIGDRKTDSELSKDSCETTSTQDAYNVEEEEFMENNKSVDTINVMEITKTEDHSLIKDLQQSQVVFIQKEDIKFVVAPMKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -