Basic Information

Insect: Pegoplata infirma
Gene Symbol: -
Assembly: GCA_963921195.1
Location: OY992538.1:209631273-209640950[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.23 20 7.2 0.4 1 19 214 232 214 232 0.93

2 11 0.0027 0.23 13.3 2.0 1 23 262 284 262 284 0.98

3 11 3.6e-05 0.0031 19.2 0.3 3 23 304 324 302 324 0.97

4 11 0.00091 0.078 14.8 1.1 1 23 350 371 350 371 0.96

5 11 0.00051 0.043 15.6 0.8 1 23 377 399 377 399 0.98

6 11 0.00067 0.057 15.2 1.3 1 23 450 472 450 472 0.96

7 11 3.3e-07 2.8e-05 25.6 0.8 1 23 478 500 478 500 0.99

8 11 5.4e-05 0.0046 18.7 3.6 1 23 506 528 506 528 0.99

9 11 3e-06 0.00026 22.6 0.9 1 23 534 556 534 556 0.98

10 11 5.8e-05 0.005 18.6 0.4 1 23 560 582 560 582 0.98

11 11 0.0043 0.37 12.7 0.1 2 23 595 617 595 617 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.23	20	7.2	0.4	1	19	214	232	214	232	0.93
2	11	0.0027	0.23	13.3	2.0	1	23	262	284	262	284	0.98
3	11	3.6e-05	0.0031	19.2	0.3	3	23	304	324	302	324	0.97
4	11	0.00091	0.078	14.8	1.1	1	23	350	371	350	371	0.96
5	11	0.00051	0.043	15.6	0.8	1	23	377	399	377	399	0.98
6	11	0.00067	0.057	15.2	1.3	1	23	450	472	450	472	0.96
7	11	3.3e-07	2.8e-05	25.6	0.8	1	23	478	500	478	500	0.99
8	11	5.4e-05	0.0046	18.7	3.6	1	23	506	528	506	528	0.99
9	11	3e-06	0.00026	22.6	0.9	1	23	534	556	534	556	0.98
10	11	5.8e-05	0.005	18.6	0.4	1	23	560	582	560	582	0.98
11	11	0.0043	0.37	12.7	0.1	2	23	595	617	595	617	0.95

Sequence Information

Coding Sequence: ATGGAGGagGAAACGGTTGATATGATAGAGGAAAGTAATGATGAAGTAGACAATTGGATGTATTATGATAAAGACTCCAGAAATGATGGCAGTTTATTTGATAATGATACCGGACAACCACCATTGATTTATGCAGAACCCACAGAATTGGTGTCAGACAATGATGATGATGAGCATAACTTTCTAACTATAAATGATGATGACAATCAAAATATGCCATATAATAATGAACTACCTGATAATAACGAAGGTGGTGATGATAACGGAGATTTTTCTAAACATACTTTAGTTTTAAAGGAAACTATAAATGATAATGGCCAATTGGTGGAAGGATATTTATGTCAGGAGTGCAACATTCCCTACAATTCAATTGAGTCATTTTTACAATATCATCCCTGTACGGAATTATATGATGAAAATCCTGAACAGCCGCATACAAATACGCAACAACAGGAACCACCAGATAAATTATGGGATTTAGTAGAAAATTTAGGAGCCACAAATGAAAATGATGTTATTGATGACGACGATAATCAGGACGATGATATTATAGATATTAAACCAAATGTTAATGATAACACCGATCCTACTCCAGAAGAAGATGTTTCAAATAATGATGTAGATGTAGATAATGAACGTTATTTTTGCTATGAATGTCAACAAGTTTTTACGGATTTAACTACGGCGGAGCGACATGATTGTAATAATCAAGTTAAAATTGCGGAGAATATAATTGaaCCAATTACTACTTCAGTGATCGAATCATCCGATAAACAACAAGTATTTAGATGTGTATTATGTGATAAAGATTACTTCAATTTACGTTCGTTTACAAATCATCAACGTTGGCATAAAAAAACGTTTAATGAGACAGGAGAAAATAAAACATTACTTGATGTTGATTCAATTTGTGGAATTTGTAATACAATATTTGCTAACGAAAAGAATTTAAAATTACACATGAAAATGCATAATAAACATACACTTAAAACTATACAAGAAGCTTTGCCCGTTGGTGCTCAAAATGAATATAAtggtttaaatcaatttttttgcgaaatatgcaataaaagTTTTGATCAAAAACTTTTAGTGATACATAAAAATATGCATCAAAATGTTGAAGAATATAATTGCAGTAAATGTAATAAACAATTTGAAAATCTACCAAGCTATGAAATACATTTACAAATGCATGGTGATATCAACGCCGGTGGTGTTAGACAATTGTCACCATCAAAAAACTTAAATGACTTGATAATAGATTGTGAATCTCCTACAACTTCCTCTAACAACACAGCAGGTGGTAGTGgtagtggtggtggtggtggtagcGGACAGCGTAAACATGCCTGCCAATATTGTGGTAAAGAATTTCAACGtccttatgaaaaagttaaacatGAACGCATTCACACTGGTGAAAAACCCTACGAATGTGAAGTATGTGGTAAAAAATTTAGAGTTTCCTATTCACTGACATTACATTTACGTACTCACACCGATATACGACCATATGTTTGTGCCACCTGTAATAAACGTTTTAAACAACAATCCGTTTATGTTCATCATATGAAGACTCATGTTAATGAACGTGCCTATAAATGTGATGTATGTGGCAAAAGTTTTCGTACATCTGTACAATTGAGTGGTCATAAAAATAGTCATAGTAAACCATTTAATTGTACCGATTGTAATCGCCCATTTGCCTCAATGTATGCGGTGAAGATACACATGAAAACCCATAATAAAACTCATAAAGcaaataagaatttaaaaaatcgttGTGGCATTTGTGGTGCTTCATATGCTCGTCTGTTTGCCTTGCGTTATCATCTTAAAGAACAACATGATGTTGATATTGATCCTAGTCAATTATTAGATGCAGAAAATATTGTTAATTCTGCAGCATCGAAAGATATGGATGCTGAAACTGCTATACTAATGCATGCAGCGAATGAAGCAAATGTTCAGAATGAACAaacaaattatttacaaaatgatGAGGCTACCGAAAAAGTTATAGAACAACAGATAGATCATGAAGAAAGTATTCAGCCATCATCTTTTTCATCAAATCCATATTTAGATGAAACAGAAGCTGCTACACAAGCTATATTAAATACTGAAGAGattattgtTGATAATTTTCATGCTGAAGAAATTATTACCGATTGGTTATCATCACAACCTTAA
Protein Sequence: MEEETVDMIEESNDEVDNWMYYDKDSRNDGSLFDNDTGQPPLIYAEPTELVSDNDDDEHNFLTINDDDNQNMPYNNELPDNNEGGDDNGDFSKHTLVLKETINDNGQLVEGYLCQECNIPYNSIESFLQYHPCTELYDENPEQPHTNTQQQEPPDKLWDLVENLGATNENDVIDDDDNQDDDIIDIKPNVNDNTDPTPEEDVSNNDVDVDNERYFCYECQQVFTDLTTAERHDCNNQVKIAENIIEPITTSVIESSDKQQVFRCVLCDKDYFNLRSFTNHQRWHKKTFNETGENKTLLDVDSICGICNTIFANEKNLKLHMKMHNKHTLKTIQEALPVGAQNEYNGLNQFFCEICNKSFDQKLLVIHKNMHQNVEEYNCSKCNKQFENLPSYEIHLQMHGDINAGGVRQLSPSKNLNDLIIDCESPTTSSNNTAGGSGSGGGGGSGQRKHACQYCGKEFQRPYEKVKHERIHTGEKPYECEVCGKKFRVSYSLTLHLRTHTDIRPYVCATCNKRFKQQSVYVHHMKTHVNERAYKCDVCGKSFRTSVQLSGHKNSHSKPFNCTDCNRPFASMYAVKIHMKTHNKTHKANKNLKNRCGICGASYARLFALRYHLKEQHDVDIDPSQLLDAENIVNSAASKDMDAETAILMHAANEANVQNEQTNYLQNDEATEKVIEQQIDHEESIQPSSFSSNPYLDETEAATQAILNTEEIIVDNFHAEEIITDWLSSQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -