Pinf003685.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- -
- Assembly
- GCA_963921195.1
- Location
- OY992536.1:44191047-44205313[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.11 9.2 8.3 2.7 1 23 19 42 19 42 0.96 2 26 0.03 2.6 10.0 3.1 1 21 49 69 49 70 0.95 3 26 0.044 3.7 9.5 0.4 1 23 79 101 79 101 0.98 4 26 0.00025 0.021 16.6 2.2 1 23 107 130 107 130 0.98 5 26 0.00041 0.035 15.9 0.2 1 23 135 159 135 159 0.96 6 26 5.6e-05 0.0048 18.6 0.9 1 23 165 188 165 188 0.98 7 26 0.047 4 9.4 0.6 1 23 274 297 274 297 0.92 8 26 0.45 38 6.3 0.4 3 20 405 422 404 426 0.90 9 26 0.0014 0.12 14.2 0.9 1 23 444 467 444 467 0.93 10 26 0.013 1.1 11.2 0.3 1 23 594 617 594 617 0.96 11 26 0.013 1.1 11.2 1.3 1 23 635 658 635 658 0.95 12 26 0.016 1.4 10.9 4.3 1 23 713 736 713 736 0.96 13 26 0.018 1.5 10.7 2.2 1 23 891 913 891 913 0.97 14 26 3.3 2.8e+02 3.6 0.5 3 23 1020 1041 1018 1041 0.95 15 26 0.037 3.1 9.7 1.3 1 23 1055 1078 1055 1078 0.96 16 26 0.0058 0.5 12.3 1.9 2 23 1141 1163 1140 1163 0.96 17 26 0.26 22 7.1 1.5 1 23 1183 1206 1183 1206 0.91 18 26 1.8 1.6e+02 4.4 1.4 1 23 1224 1247 1224 1247 0.93 19 26 0.52 44 6.1 2.8 1 23 1756 1779 1756 1779 0.90 20 26 0.0062 0.53 12.2 0.8 2 23 1789 1811 1788 1811 0.96 21 26 6.9 5.8e+02 2.6 1.0 1 23 1816 1841 1816 1841 0.84 22 26 1.2e-05 0.001 20.7 0.7 2 23 2126 2147 2126 2147 0.97 23 26 2.3e-05 0.002 19.8 0.6 3 23 2186 2206 2184 2206 0.96 24 26 1.3e-05 0.0011 20.6 1.0 1 23 2212 2235 2212 2235 0.95 25 26 0.00023 0.019 16.7 0.7 1 23 2240 2264 2240 2264 0.98 26 26 0.00052 0.044 15.6 3.8 1 23 2269 2292 2269 2292 0.97
Sequence Information
- Coding Sequence
- ATGACATCATTATTAGAAGCTGGCGTTAGAGTACCAATCCCTAAAGGACCACCATTTATATGTGAACTTTGTGGACATAATTCTCCAACTAAATCACTTTTAGCATCTCATCGTCATCGAAAACATCGTCACAAGCCGGATATATTTGAATGTGAAAaatgtcaacttaaatttaatactaaacaccAATATGATAAACACTTAAATAGACCCTCGTGTGAGCGCTATCCAAAATATACATGTGAAGTTTGTTCGAAGGATATCACAGGTTTTGCAAATTATAACATACATATGAGATTCCATAATAAAGAATATCCATTTGTGTGCCATGAGTGTGGCAAAGGTTTTATGTTGGCTATCCATTTAAAAACTCATATTCAAACTAAACATGAAAACAAACGTTTTATTTGTGAAGTAGCCGGTTGTGGTAAATTATTTCAATCTCAAAGTTCTTTAAAAACACATATGTATGTTCATATGGATACCATGCCATATCGTTGTGAATATTGTAATAAAATGTATCCAAATAAAGCAAGATTACGTTGGCATATACAAAAGCTACATAATGTTCAACTTACTCTGCCAGAATTGGATCAATCGAATAAAAAACGTGAAGCtgttaagaaaattaagaaaaaagacCAATCTGTGGAAATCAAGGAAGAAATTATAACTGAAGATGATATTTTTAAGAGCACAAATCAAAATAACGTTCCTAACTTACCAAATAAACATATAGAAGAAATACGAATTGAAAATGAATTTGCCAGATATCATGCAACAATCATTGAACctataaaaactaaaacaacccacgaatttttatgtgaaatttgtaatgaaagtTGTGAAACTCAAACTCTTTTGGCTGAACATGGTCGAGAGAAACATGGAATTCTTAGAGATATAATAAGTGAACCTCCTATATTAATTAAAGAAGAAGTTGTGGAGGAGGAATTGCCGAATTTACTGGTTAGATCAACAGCCCCAAATGATATTTTACTGCACAACAAAGTGTTGGAAGATTTGGAAAATGTAGACGCAACAACTATGGAAAATGAAAGACAATCCTTAACAAATGATGCACCATTTAATTGTAAACTTTGTGGTCATATATCAACTACCAAAAATTCTTGCCAACATAGACTTTTAGAACAGCGCAACGTAGAGCCCGAAGTAAATGTACGTTTTGGAAAAGGACCAATTATTTTATGTGATATTTGTGGTTTAAGTTTACCAAGTCAAAATTCTTTGAAAATGCATAACTTTCAAAAACATccagaattagaaaaaaattccataaaacTAACTTTATGGAAAGAAAAATCCTTTGTGTGTGATTTATGTGGACAAAAGTTTTCATCCAAAAATGATTTTAGTCAACACTATGCGCTAAATCATAATTTAGCAACGAAAACATTTGGTGACATTTTCGATTTTGCCAATGAAGCCCAAACATTTAAAGAAACAACTCAGGAAGAACTTTTAAAAGAAATGACAACAAGTGAAATGGTAAATGATCAGACCTTAATAGTTCCTTTAATTCCGTTAAGAGATGATGACCTTAAAACAATAAGAGAAAATTCCTTATGTCCACTTCCTCTACAAAAAGTTAAACACAATTTAAAAGTAAAAACTTTTGAAGACAATGAAGATTTCTTCGATGCCTCCCAAACTCAAGAAGaactttttaaagaaataaatattCAAAATGTCAAGACCTCAGCGAAGCCTAAAACTCCTTCTAAACAAAAACAACTACCATCAGACAGttccatatttatatgtgaagatTGTGGTTATggatcagcaaaaaaaaattccttaattCAACATCGTCTTAGAAAACATCGTCGACAGTCAGCTAAACAGATTAGACAAACATTACCAGATGGTCCACCATTTATATGCGAAGAATGTGGATATAGAGGAGCAAATAAAAGTTCTTTTACTCAACATCGTTTTAGAAAACATCGTCGACAGCCAGCAGAACACAATTTAGAATTGAAAGACAATGAAGATGCCTTGCAAACTCAAGAAGAACTTTTGGAAGAAATAATGGTAACAAATGATCAAACCTTAATGAAGCCTAAAACCCCATctaaacttaaacaaaaattacCAGTTGGTCCCTCATTTATATGTAAAGATTGTGGTCATAAAACGTACAATAAAAATTCTTTAACTCAACATCGTTTAAGAAAACATTGTCAACAGCCAGCTAAacagaatttaaaattaaaagcttttgagaaaaataaagatgaatccaaaatttttgaaaactcaaATCAAGAAGAACTTTTGAAAGAAATGAAAATTCAAAATGAGCAAACCTTAACAATTTGTAATACTCCAGCAAAACTAAAACAACCATTACCAGATGGTTCACCATTTATCTACAAAGATTGTGACCAAAGAAGAGCAAATGAAAATTCTTTAACTCAACTTCGTCGACAGTCAGCAAAACACAATTTTGATGTAAAAACTCTTCAGGAAAACAAAGATAAATCTCAAACATTTAAAGACTCAACTCAAGAAGATGAATGTAAAACTTTTGAAGACACATTACAAGATCTTTTAGAAGAAATGATTACTCAAAATGAGGAAATCCTAACAATTCCTAAAACTCCAGCAAAACTTAAACCAACATTGTCAGATGATCCACCATTTATATGCGAAGAATGTGGCCATAAAACAGTTAGTAAAAATTCTCTATATCAACATCGTCTGAGACATCGACTGCTAGTTGAAAATAATTTAGAAAtaaaatcgattaaagaaaatgAAGATTTCCTAAACGAAAACCAAACTGTTAAAGAACAACTATTAGaagaaataaacattaaaaatatagtaAATAATGAAGACCAAACCTTAACAACTCCAATAACTTCTTCAAAACAAAATCAATCACTACCAACTGATTTCCCATTTCAATGTAATAATTGTGATTATAAAGCAGCAAGTGAGAATATTTTAGcacaacattttctaaaaaagcattctcaaataGAAAAAAAACGTCAAGAATTAATTGATAAGGGAAAAATAAATTGTGAATTATGTAATTTCTTTACATACGCAAAAAGGGGTTTGATACAACATTATCGTGTAAAGCATaacaaaagttttccaaaaagcTTACAGGATGTTTTAGGATTTAGTTGTAATCTATGTGACTATTCTTCAACAACAATTACAGCTTTACGTCAACATAAATCTCGAAACCATCGTCAGGAAATCAAAGGAAGATCACGTTACTCAACGAAAACTAAAACATCAAATACTGAATTTAAACAAATAGAAATAGATAATAATCAATGTCAAACGGAAAGCAACAATTCGGAAATGTCTACCGACAACAGCCAAGCATTGGCAAATTCAAATCCAGAATCCTCCCCCTCTCCACCAAACATAAAATgtgaattttgtgattttaaaacaacaacaaataatgAATTGCAAAAACATTATCGTTTACAACATAAAGAAAATATGGCTACAATTATAAAAAGATTACCAGCACCTAAAAGTATTTTGGAATTTAAATGTAACTTGTGTGACTATAGATCTGGAAGCCGGCAACTTTTGAACTCCCATCGATATGCTAAACATCGGGAGTATGTGCCAAAGAAAAGACATTATGCTCCGAAAGATGGTTCAGGATTTAGATGTAACAATTGCGATTATAGATCCGCAACTATTGTAGCAATGCGTCAACATAAATTTCGTAAGCATCGTGAAAAGGTCAAAAGAATAATACGTTATACAGATGAAACACCAGAAATGGATGTAAGTTCTTCAGAAAGCGATACGACGAAACTTTCGGTATCCACAagtaaaaaaacatcaaatttaaCTCCTCCACCTCTATCACCACTACCAAAGATACCCAACTCAAATGATGACAGCCTACAACTTGACATAAGATTGCCTATACTGAAAGGACCTCCAGATGAAACAGCGAAAACAGATATAAACACATTAGAATCCGATACGACGAAACCTTCGGTATCCACAAGTAGAACAAGATCAACGACGAAACCTTCGTACACAAGTACAACAACATCAACTTTAATACCTCCACCTCTATTACCACTACCAAAAATACCTTACTCAAATGATGACAGCCTACAACTTGACATAAGATTGCCTATACTGAAAGGACCTCCAGATGAAACATCGAAAACAGATATAAACGCATCAGATGCCGATACGACGAAACCTTCGGTATTCACAAGTAGAACAAAATCAACGACGAAACCTTCGTACACAAGTACAACAACATCAACTTTAACACCTCCACCTCTATTACCACTACCAAAAATAAGATACATAAGATTGCCTATACTGAAAGGACCTACAGATGAAACATCGAAAACAGATATAAACACATCAGAAGCCGATACGACGAAACCTTTGGTATCCACAATTAGAACAAGATCAACGACGAAACCTTCGGTATCCACAAGTACAACAACATCAACTTTAACACCTCCACCTCTATCACCACTACCAAAGATACCCAACTCAAATGATGACAGCCTACAACTTGACATAGGATTGCCAATACTGAAAGGACCTCCAGATAAAACattgaaaacaaataaaaacacatCAAAAACCGATACGACGAAACCTTTGGTATCCACAAGTAGAACAAGATCAACGACGAAACCTTCGGTATCCACAACTAACCCAAAATCAACTTTAAAATCTCCATCACCACTACCAAAAATGCCCAACTTAAATGATGACAGCTTGCAACTTGACATTAGATTGCCAATACTTAAAGGTCATCCAGATGAAACATCGAAAACAGATAAAAACACATCAGTAACCGATACGACGAAACCTTCGGTATCCACAAGTAGAACAGGATCAAATTTAACACCTCCACCCCCTTCGCCATCACCAACTTTGCCATCACCACCTTTAACATCACCACCTTCACCTTCGCCATCACCGTTACCAAAAAATCCCAACTTAAATAATAGAAGACTTAAACGTGGCATACTTAAAGGGCCTCCATTTATATGTGAACTTTGtgaatataaaacaaattttaaaagctGTTTATATTCCCATCGTTATTCTAGACATCGTGAAAAACCTAAACATGAAAAAACTCACGAAAAACCATATGAATGTCTGTATTGTGAACATCGTGAGCGCCACAAGAAACCTTTATATCAGCATTGTCATCTTAAACATCAGCATGAACATTCAGTGTCGCCGAATACACTTCCCTATAAAACAGCTTATAAATGTAACATTTGTGATTATTACCTGCCTTCAAAACCGTCTCTTTATCACCATAAATTTGAAAAACATCGTGATAATAAAACTGCTTATCCCTTAAGATGTCCTCAGTGTTCGAAAGGTTTTCAAAAGATGGAAATgttaaaaatacatataaaaaaacaacatcctaataaaaatttcaattgtgaACATCCTAGTTGTGGACTAGAACATGAAACGGAAGAAGCACTTAAAGATCATATGAGACGTGAACATACCCATTTAATGCCTTATCGTTGCGGCAATATAATTTATATATCATCACCCGAGTCAGAAAAAGAAGATACTTCTTATACCAAGAATCCAAATTTATTACAAGAAACATCAGATGATGACACGCTAATTGAGGAGGAAATTTCAGATAATATGACAAATACACCTAAAGAAGaggactttttatataaaagcaaATCAAGCACATTGCAAGATATTAACGTAAGTTCAACAGATGAGACTATCATTGAGAAAGAAATGTCTAAAAACATGATAAATAATTGTGGAAACCAAGAGACACTGAATGATTTAATACTAGATGAGTCAATAATCGAGGAGGTTACATCTGAAGATGATATTGAATGGTCAGATAGTTTAGTAAACAAGATTTCCAACAAAGAAACACTGCAAAATGTAATATCAAAATCTACAATTACTAAAAGTAATTCAGACgcaattaaaaaagttactacTTATGATGAAATACCAGAGATGATAGAAAAAGAATCGGGTTTTAATAATGAAACTGATAAACCTCAAATTATTCGCACAGAAACTCAACAAAATtcacaagaatttttaaaaaaacaatgtgACTTAAATATAATACGAAAGGTTATAACTTATAGTGAAGAACCTGAAATAGATCAATTAAGTTCAACTCATGATATACCCACAACAATTGAAAGGGgacttaataaaaataatataaatccaCTACACACATCCCTAACTAATGAATCACATACAAATGTACAACATTTTATTATTGATGGATCTCTAAATGGCGATCCTGCAGTTGAAACTATTATACTAGATCCAGAAAATACACTTTTCAACAAACATAAATCAGCCTAttgtaatatttgtaataaatctTTTGCTAATCCCAGCAAATTAAATTGGCACAATCGTATGCATGATAAAAATCGTAAACGTTATTATTGCGCCAAAGAAACGTGTAATCGTTTTTATACCTCTAAACAGGCCTGCGATTTACATTATAGACAAACTCATCTAGATGAAGGTTTATTTTGTTCAATATGCAATAAAGTATTTTCGGTGAAGCAAACATTGGAAGTTCATATGCGCTATCATACGAAAGAATTTCCATTTGCATGTAATATATGTGATAGAAAATTTGCCCAAAAGGGTCATTTAACGCAACACATTGAAGTTAAACATCGAAATTTACGTTATGTATGCACAGAAACGGATTGtggtaaaatatttcaaaatagtgTTTCGTTAAAGAATCATCGTTATACACATTCGGGAATGCCGTTTAAGTGTACACATTGTGATAAGGAATATCCGCAGAAAAATAAGTTAAGaattcatttattaaaaaaacacaatctGGACTTTAAACTGGAAGATTTAGAATCAATGCGTCAATTCAAATCTTTTCGCACTCGCCATTCTTATTATAAAGTTCAATCGATAGAAGAACCTGTTGATAGTGAATCGGATAATTCTTCGCTACCAACAACTGATTTATTAGAAGAATTAGATGTGGGGATGTAG
- Protein Sequence
- MTSLLEAGVRVPIPKGPPFICELCGHNSPTKSLLASHRHRKHRHKPDIFECEKCQLKFNTKHQYDKHLNRPSCERYPKYTCEVCSKDITGFANYNIHMRFHNKEYPFVCHECGKGFMLAIHLKTHIQTKHENKRFICEVAGCGKLFQSQSSLKTHMYVHMDTMPYRCEYCNKMYPNKARLRWHIQKLHNVQLTLPELDQSNKKREAVKKIKKKDQSVEIKEEIITEDDIFKSTNQNNVPNLPNKHIEEIRIENEFARYHATIIEPIKTKTTHEFLCEICNESCETQTLLAEHGREKHGILRDIISEPPILIKEEVVEEELPNLLVRSTAPNDILLHNKVLEDLENVDATTMENERQSLTNDAPFNCKLCGHISTTKNSCQHRLLEQRNVEPEVNVRFGKGPIILCDICGLSLPSQNSLKMHNFQKHPELEKNSIKLTLWKEKSFVCDLCGQKFSSKNDFSQHYALNHNLATKTFGDIFDFANEAQTFKETTQEELLKEMTTSEMVNDQTLIVPLIPLRDDDLKTIRENSLCPLPLQKVKHNLKVKTFEDNEDFFDASQTQEELFKEINIQNVKTSAKPKTPSKQKQLPSDSSIFICEDCGYGSAKKNSLIQHRLRKHRRQSAKQIRQTLPDGPPFICEECGYRGANKSSFTQHRFRKHRRQPAEHNLELKDNEDALQTQEELLEEIMVTNDQTLMKPKTPSKLKQKLPVGPSFICKDCGHKTYNKNSLTQHRLRKHCQQPAKQNLKLKAFEKNKDESKIFENSNQEELLKEMKIQNEQTLTICNTPAKLKQPLPDGSPFIYKDCDQRRANENSLTQLRRQSAKHNFDVKTLQENKDKSQTFKDSTQEDECKTFEDTLQDLLEEMITQNEEILTIPKTPAKLKPTLSDDPPFICEECGHKTVSKNSLYQHRLRHRLLVENNLEIKSIKENEDFLNENQTVKEQLLEEINIKNIVNNEDQTLTTPITSSKQNQSLPTDFPFQCNNCDYKAASENILAQHFLKKHSQIEKKRQELIDKGKINCELCNFFTYAKRGLIQHYRVKHNKSFPKSLQDVLGFSCNLCDYSSTTITALRQHKSRNHRQEIKGRSRYSTKTKTSNTEFKQIEIDNNQCQTESNNSEMSTDNSQALANSNPESSPSPPNIKCEFCDFKTTTNNELQKHYRLQHKENMATIIKRLPAPKSILEFKCNLCDYRSGSRQLLNSHRYAKHREYVPKKRHYAPKDGSGFRCNNCDYRSATIVAMRQHKFRKHREKVKRIIRYTDETPEMDVSSSESDTTKLSVSTSKKTSNLTPPPLSPLPKIPNSNDDSLQLDIRLPILKGPPDETAKTDINTLESDTTKPSVSTSRTRSTTKPSYTSTTTSTLIPPPLLPLPKIPYSNDDSLQLDIRLPILKGPPDETSKTDINASDADTTKPSVFTSRTKSTTKPSYTSTTTSTLTPPPLLPLPKIRYIRLPILKGPTDETSKTDINTSEADTTKPLVSTIRTRSTTKPSVSTSTTTSTLTPPPLSPLPKIPNSNDDSLQLDIGLPILKGPPDKTLKTNKNTSKTDTTKPLVSTSRTRSTTKPSVSTTNPKSTLKSPSPLPKMPNLNDDSLQLDIRLPILKGHPDETSKTDKNTSVTDTTKPSVSTSRTGSNLTPPPPSPSPTLPSPPLTSPPSPSPSPLPKNPNLNNRRLKRGILKGPPFICELCEYKTNFKSCLYSHRYSRHREKPKHEKTHEKPYECLYCEHRERHKKPLYQHCHLKHQHEHSVSPNTLPYKTAYKCNICDYYLPSKPSLYHHKFEKHRDNKTAYPLRCPQCSKGFQKMEMLKIHIKKQHPNKNFNCEHPSCGLEHETEEALKDHMRREHTHLMPYRCGNIIYISSPESEKEDTSYTKNPNLLQETSDDDTLIEEEISDNMTNTPKEEDFLYKSKSSTLQDINVSSTDETIIEKEMSKNMINNCGNQETLNDLILDESIIEEVTSEDDIEWSDSLVNKISNKETLQNVISKSTITKSNSDAIKKVTTYDEIPEMIEKESGFNNETDKPQIIRTETQQNSQEFLKKQCDLNIIRKVITYSEEPEIDQLSSTHDIPTTIERGLNKNNINPLHTSLTNESHTNVQHFIIDGSLNGDPAVETIILDPENTLFNKHKSAYCNICNKSFANPSKLNWHNRMHDKNRKRYYCAKETCNRFYTSKQACDLHYRQTHLDEGLFCSICNKVFSVKQTLEVHMRYHTKEFPFACNICDRKFAQKGHLTQHIEVKHRNLRYVCTETDCGKIFQNSVSLKNHRYTHSGMPFKCTHCDKEYPQKNKLRIHLLKKHNLDFKLEDLESMRQFKSFRTRHSYYKVQSIEEPVDSESDNSSLPTTDLLEELDVGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -