Basic Information

Insect: Pegoplata infirma
Gene Symbol: -
Assembly: GCA_963921195.1
Location: OY992540.1:214095351-214100461[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0076 0.64 11.9 0.6 1 17 214 230 214 231 0.93

2 13 1.4e-05 0.0012 20.6 0.5 1 23 333 356 333 356 0.93

3 13 0.00012 0.01 17.6 4.1 1 23 362 384 362 384 0.97

4 13 9.4e-05 0.008 17.9 0.4 1 23 397 419 397 419 0.98

5 13 0.26 22 7.1 0.3 1 23 428 451 428 451 0.92

6 13 0.00095 0.081 14.7 5.0 1 23 457 479 457 479 0.98

7 13 0.00032 0.027 16.2 0.2 2 23 486 507 485 507 0.97

8 13 3.3e-06 0.00028 22.5 1.4 3 23 515 535 513 535 0.95

9 13 0.011 0.94 11.4 4.9 1 23 541 563 541 563 0.99

10 13 0.0012 0.1 14.4 4.1 1 23 569 591 569 591 0.97

11 13 1.4e-05 0.0012 20.5 1.2 1 23 597 619 597 619 0.99

12 13 1.3e-06 0.00011 23.8 1.3 1 23 625 647 625 647 0.99

13 13 0.00015 0.013 17.3 0.1 1 23 653 675 653 675 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0076	0.64	11.9	0.6	1	17	214	230	214	231	0.93
2	13	1.4e-05	0.0012	20.6	0.5	1	23	333	356	333	356	0.93
3	13	0.00012	0.01	17.6	4.1	1	23	362	384	362	384	0.97
4	13	9.4e-05	0.008	17.9	0.4	1	23	397	419	397	419	0.98
5	13	0.26	22	7.1	0.3	1	23	428	451	428	451	0.92
6	13	0.00095	0.081	14.7	5.0	1	23	457	479	457	479	0.98
7	13	0.00032	0.027	16.2	0.2	2	23	486	507	485	507	0.97
8	13	3.3e-06	0.00028	22.5	1.4	3	23	515	535	513	535	0.95
9	13	0.011	0.94	11.4	4.9	1	23	541	563	541	563	0.99
10	13	0.0012	0.1	14.4	4.1	1	23	569	591	569	591	0.97
11	13	1.4e-05	0.0012	20.5	1.2	1	23	597	619	597	619	0.99
12	13	1.3e-06	0.00011	23.8	1.3	1	23	625	647	625	647	0.99
13	13	0.00015	0.013	17.3	0.1	1	23	653	675	653	675	0.96

Sequence Information

Coding Sequence: ATGTCTgaagatttattaaaaaagtgcCGCACTTGTTTAAGTGATTCGCATATATTTCATCAACTCTTCGATTATGTGgatgaaaattataaaattctggAAATGTTAGATGGCATAGTGCCACAAATATATATTAAGGCTTCTACAAAGTTTTCCAGCTATGTGTGTCAAACGTGCGTCGATAAACTGTTGATCGGTTATAAATTCCAACAATTATGCATAGAAACCAACAGTCGTCTTCATGATTTGATGGGCATAGTTGTATTTGAGACCGCACctaaaataattgatgaaaagtTACTGGATCCTTTGACGGGAGAggcaaattttaaattaaagcaaGAGGTAGAAGATGAAGCATGTTTTGAATGTGAAATAGAACCCGAAGAATTTATTTCAATGGCATCCGCCAGCGATAATGATACGGATAATGATTCAGATTTTAGCAATGAAAAACTTTTAGTTTTTAAaggaaacaaatcaaaaaaatgccCCACAAAACCTACAGAATTGGAAAAACCTAACAAAAATAATCAACGTAAGCAAATAAAAAATAAGGAAAGGAAAGAAACGAACAATATCAACAATGATAATACTGATCTAAAAGATGAAAATGACATTATTGAGGAAATACAATCATTTCAGTGTCCTGATTGCcataaattatttgaaaaaaagtcaTCGTTATCGGCCCAATGTAAAgtacatataaataaaaataaaactaataaGGACCCTAATAATGAAGAATTTATAGATGAAGTTGCAAAATCAAAAGTAAAAATGGAAATAGAAACACACATTTTTGAAGAACCAATGGATGATTTAAACGCAGATGCAGAATTGTGTAGTAATGACTATGAGGATCCAGatgattattctgaaaaaaatatttttgcaaagccTAAAACCATGCATACTAAAAATCTTGAATTTATTGATACCGGAATAGAAGAAATAGAAAAacctAATGATAGTGATAAAATAAGCTATATTTTTCCTTGCGAACTCTGTGGAAAAGTTTTTAACCGTCCATATCGTTTGAAACGTCATAGTTCTTCTGTACATTCCATTTCTAAACCGCATGAATGTGAAATTTGTAAATATCgctttcctacaaaaaaatatttaaaaaatcatttaaaacaaCATGAAGACGTTTTAGTATATCAATCACAACCGGAGGGCTTTAAATGTCCCGATTGTCCAAGACTTTTTAAAACAAAGGCTTATGTGTCCGCTCATCGTCAAATACATACCCGAAATGGTGCAGACGCTAATTATCCTTGCAAGGTGTGTCAACGAAACTTTTTGTCGGTTATGTCTTTAATTGAACACATAACCAATAAACATCCGGAAGTAGAAAAACACAAATGTGATCAGTGTGATAAAACGTTTGTCCTACATGCTCACCTggtcgaacatttaaataaacatAAAGGCAATACGAATGTGGAATGTTTAATATGTGAAAAAGAATTTGGCTATACCAATACTTTGAACGAACATATGCGCACACATTTCGGGGAAAGTCCTCACTTGTGTCCTCAGTGTGGTAAAACATTTCAAACTGCTAGCAATTTACGTCAACATGTGGAACGGCATGCAGGTTTGAAGAAATATCGGTGTACTGAATGTCCAAGCCGTTTCAGTTGTCGTTCATATTTGACAAAGCATACTTTAACTCATTCTAATGATAAGCCACATGTATGTGATATGTGTGGTTCACGTTTTACGCGAGGTTGTTCATTGCGAAAACACATGTTGTCACATTCTGGAGAAAGATCGTTTAAATGTGATCAATGTAGTATGACaTTTGCCGGTATGTACCTTTTAACACGTCACATGCGTACCCATACGGGAGAGAAACCATATAAATGCAAGTACTGTGAACGTGCCTTTGCAGAAAGTGGATATTTAACCAAGCATTTGCGGACTCATGTAGGTGAAAACACCTATATGTGTGATCAGTGTCCTGTTGCTTTCAAATATCAAGCTGAGTTAAAACAACATCAAGCGGAACATTATAGAATGGCACAAAAACTCTTGCAACAAGCACAAAAGATGACCCAAAATGCAcaaccagagtcatag
Protein Sequence: MSEDLLKKCRTCLSDSHIFHQLFDYVDENYKILEMLDGIVPQIYIKASTKFSSYVCQTCVDKLLIGYKFQQLCIETNSRLHDLMGIVVFETAPKIIDEKLLDPLTGEANFKLKQEVEDEACFECEIEPEEFISMASASDNDTDNDSDFSNEKLLVFKGNKSKKCPTKPTELEKPNKNNQRKQIKNKERKETNNINNDNTDLKDENDIIEEIQSFQCPDCHKLFEKKSSLSAQCKVHINKNKTNKDPNNEEFIDEVAKSKVKMEIETHIFEEPMDDLNADAELCSNDYEDPDDYSEKNIFAKPKTMHTKNLEFIDTGIEEIEKPNDSDKISYIFPCELCGKVFNRPYRLKRHSSSVHSISKPHECEICKYRFPTKKYLKNHLKQHEDVLVYQSQPEGFKCPDCPRLFKTKAYVSAHRQIHTRNGADANYPCKVCQRNFLSVMSLIEHITNKHPEVEKHKCDQCDKTFVLHAHLVEHLNKHKGNTNVECLICEKEFGYTNTLNEHMRTHFGESPHLCPQCGKTFQTASNLRQHVERHAGLKKYRCTECPSRFSCRSYLTKHTLTHSNDKPHVCDMCGSRFTRGCSLRKHMLSHSGERSFKCDQCSMTFAGMYLLTRHMRTHTGEKPYKCKYCERAFAESGYLTKHLRTHVGENTYMCDQCPVAFKYQAELKQHQAEHYRMAQKLLQQAQKMTQNAQPES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01165755;
90% Identity: -
80% Identity: -