Pinf025948.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- Tf2-12
- Assembly
- GCA_963921195.1
- Location
- OY992538.1:167388726-167428408[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.24 20 7.2 1.6 2 23 1197 1218 1196 1218 0.96 2 24 0.00023 0.019 16.7 3.1 2 23 1245 1266 1244 1266 0.95 3 24 0.00012 0.011 17.5 4.4 1 23 1272 1295 1272 1295 0.98 4 24 0.96 82 5.3 0.5 2 23 1319 1341 1318 1341 0.92 5 24 0.0089 0.76 11.7 3.1 1 23 1348 1371 1348 1371 0.97 6 24 0.0011 0.096 14.5 1.6 2 23 1375 1396 1374 1396 0.93 7 24 0.42 36 6.4 5.3 1 21 1403 1423 1403 1425 0.91 8 24 5.3e-05 0.0045 18.7 1.7 1 23 1431 1454 1431 1454 0.97 9 24 0.0099 0.85 11.5 1.0 1 23 1461 1483 1461 1483 0.95 10 24 0.00045 0.039 15.8 1.0 1 23 1490 1512 1490 1512 0.98 11 24 0.076 6.5 8.8 2.8 1 23 1518 1541 1518 1541 0.98 12 24 0.0036 0.3 12.9 0.8 2 23 1700 1722 1699 1722 0.97 13 24 0.042 3.6 9.6 4.8 1 23 1729 1752 1729 1752 0.93 14 24 4.6e-05 0.0039 18.9 2.7 1 23 1759 1781 1759 1781 0.96 15 24 6.2e-05 0.0053 18.5 2.6 1 23 1788 1810 1788 1810 0.98 16 24 1 87 5.2 0.1 2 23 1825 1847 1824 1847 0.92 17 24 0.5 43 6.2 5.6 1 23 1861 1883 1861 1883 0.94 18 24 9.2e-07 7.8e-05 24.2 0.9 1 23 1890 1912 1890 1912 0.99 19 24 0.052 4.5 9.3 5.3 1 23 1918 1941 1918 1941 0.98 20 24 3.9 3.4e+02 3.4 4.5 2 23 2160 2182 2160 2182 0.96 21 24 0.0078 0.67 11.9 2.3 1 23 2189 2212 2189 2212 0.91 22 24 0.0023 0.2 13.5 1.8 1 23 2218 2240 2218 2240 0.95 23 24 1.9e-05 0.0016 20.1 0.9 1 23 2245 2267 2245 2267 0.97 24 24 0.00064 0.055 15.3 0.9 2 23 2274 2296 2273 2296 0.96
Sequence Information
- Coding Sequence
- atgaaaaaatcaaaatttagagAATTAAAGCCTTTACATATTAGAATTAAAGAATACAAAGAAGCTAGAATAAGAATTTTTGGAGAAGTTTCTAATAGGATTAGGAAGGCGAGGGAGCGGTACAAGAAAAGAAAAAGAATCCGTAAGGAGATCTCGTCAGCATCGTTATATGAGGGGGAGGATACAAGGTTTTATTCAAAGCTTACAATTAATGGTCAGGAAATAGAAGGGTTACTAGACAGTGGCGCCACAGTCACCTGCTTAGGTAGGGATTGTTTGAAGTTCGTTGAAAGAGCTAATCTAGTAATGCACGCATTTAATTCGTTTATAAAGACAGCTGATGGGAGTCCCCATAAAATTGTCGGTAGGGTTAAAGCAAACGTTGAATTCAACAAACTGAataaaataatatgtttttacttggTTCCAACATTAAACCGAGAGCTATTTTTAGGAAAAGATTTCATGAAATCTTTTAATCTTTTCGGTCAAGTAGGTAGCCTTACCACTAATGATGTCAGCCTTTGCGACGAAGCTGAGCCTGATAGCCTCGAGGTTAAAAATCATGTCTTGTTACCGTACCAGCAACGGCATCTAGATTCTGCAATTGCTCTATTTCCTTGTTATACGGAAAAAGGTCTAGGGAAAACTCACCTGGAGATACACTCGATAGACACACGTGATGCAACTCCGGTGAAAGATAGACATTATCCTGTCTCCCCGGCTGTGCAGAAGTTGATGTATGCAGAGCTAGATAGGATGCTTGACCTAGGTGTGATTGAGCCAAGTGAGAGTCCTTGGAGCCATCCGGTTACTTTAGTCCGAAAGGGCGAAAAGAATCGTTTGTGCTTGGATGCCCGTAAGCTCAACACACTTACGGTTAAGGACGCCTATCCTCTGCCGCACATTGAGGGTCTGCTCAGTCGATTGGGAGACACGTATTTCATTTCCAGTGTTGACCTTAAGGACGCGTTCTGGCAGATACCCCTTGAGGAGTCTAGTAGAGAAAAAACTGCATTTACGGTACCAGGAAGGCCACTTTACCATTTTACGGTTATGCCTTTTGGGTTGTGTAATGCAGCCCAAAGGTTATGCCGTTTAATGGATAAAGTGATCCCCGCAGTACTTCGTGATAGAGTTTTTGTCTATCTAGACGATCTCTTGGTGGTATCTCCAGACTTTAATACTCACCTGGAGTTGTTGAATCGTGTGTCTGAGTGTTTGGACAGAGCGGGTTTGACCATAAATGTGGGCAAATCAAAGTTCTGCTTTAAAGAACTTCGGTATCTAGGGTATATCGTAGGTGGGGGTAAACTAAAACCGGACCCAGCGAAAATTGAaagcattttaaaatattcttatccTAAAACTGCTAAACAGGTAAGGAGTTTTATGGGTGCCACGGaCCAGGCAAAGGTAGCGTTCGACAATTTAAAATCTGCACTGACGACAAGTCCGGTAATTGTACACCCTGACTTTTCGAAACACTTCTATGTCCAATGTGATGCTTCGGATATCGGTATAGGGGCCGTTCTGTTTCAAAAGGACGAGTCCGAAGGCGAGCATCCAATAGCATACTTTTCCCAGAAGTTGTCTCCCGCTCAGAGAAATTACTCTGTGACCGAGAGAGAATGTTTAGCCGTAGTGATGGCCATTAAAAAGTTTAGAGCCTATATTGAACTGATGCCGTTTACGATTATTACTGACCATAGTAGTTTGAAATGGCTGATGTCCCATAAGGACCTCAGCGGTCGTTTAGCCAGGTGGAGCCTTCACCTACAATCGTTTTCGTTTTCAGTTGAACATAGGCAAGGGAAACAAAATGTGGTACCTGATACCCTATCGCGGTACGACATGGAAGAGGTTTCGATGGTTATGGATACTTTAATTGACTTGGAATCAGATGCATTTAAATCGGAGCACTACCTTGAACTGATTGAGAAAATTCGAACTAACTCTGAGCAACTCCCGGATATTAAGATCGTGGATAATTTAGTCTACAAGAGAACTTTGCCATACGATGGGGTTCCCTTGAATGAAGATTTTTGTTGGAAACTTTGGGTTCCACTAGAGCTGACGGACAGCATTATTAGGAACGCCCATGAGCCACCACAGGCGGCCCATGGGGGATTTCATAAAACACTTCGGCGTACAAGGGAATATTTTTATTGGCCCAATCAAAGTTCGCAGGTTCGCAGCTTTATACAAAAATGTCAGGTTTGCAAGGAAGCTAAGCCAGCAAACACCGTTCTTCGTCCACCAATGGGCAACGAAAGTATCGTTGATCGTCCGTTTCAACgaatatatatagattttttagGACCGTATCCGAGGTCAAAAGCTGGTAACTGCTTTATATTTATCGTGTTAGATCATCTAACAAAATTCGTGTTGTTAAAGGCCATGGCAAAAGccaatacaaaaaatgtcgttAGGTTTTTAATTTCTGAAGTTTTTCACAAGTTTGGAACTCCGGAAACCATTGTCTCCGATAATGGCAAACAATTTATAAGCAAAGAATTCGCAGACGTTATAAAGAATTTTGGTATTAACCACATGAGGACGGCGACCCATTCACCCCAGGCTAATGCATCCGAAAGGGTGAATCAGTCAATTTTAGCCGCGATACGTTCATATCTAAAGGAGGATCATGGGGACTGGGACAAGTATTTGTCCGAGATTGAGTGTTCGTTAAGATCTTCTGTACATAATTCGATTGGTGTTACACCCTACTTTGCGTTGTTCGATACAATTGCTACAATGGATTTGGAAGTTTGTAGAATTTGTGGCGGCAACACCAAGTTAAAAAGTATTTTAGATCAAGAACCCGAAAGAGCTCAATCCTTAAAGAGTGCCAACATTCAAAAGGGATTCCGGGAAGTTTCTTTATCTAGTTTTATATGTCAACAATGTGATCAACATTTGGACTTATCCCACAAGTTAAGACAACAAAGCGCAGAGACTGCAAGTCCCTTGAAAAAAGAGATAAAGATTAAAAACGAACCAGCCTTTGTTGAAGAACCGGCAAGGGAATCAATTGTAGAAACTACTAATAGTTCGATATCCTGCAAACAGGAAATAATGGTTGATACACAATCCACAAGTAAATCATCCTCAGTACAAATGGCCCTAGAAACTTCTGCTGCATCATCAAATAATGTCGCCTGGAATAaagaaataaaaccaataaatctTCCATTGAAAATTGAACCCAGTGATATGGATGAAGATTTTCCAATGGATAATAACAGCAATCCTGTATTAGCAAATGAATCCAGTAATGTTTTTGAAGTATATGAATTCCTAGAGGCACATTCACCTTCATTTACATTAGCCCAAAATGATATTAAAATTGAAGAAGTAAAATTAGTTCTTCCAGATCAAATCTCAATTGATGAAGGTAATAATGCTGCAGAATCACAAAATTATTTGCAAATGCAACAATCTGAAAGGACGTCATTTGTCAATAATAGCAGTATTGACAACGACACATCACCATCATCTGATTCCGATACGATAGATAGTGAAGATCTAAGTTTAAGTAGTCTTTCGAAATCTCGCCGTAAAACTGGTCATTTGTCACCATTAACCTGTCCCACATGTTCTAAAGTATTGCATTCGCAGAAAGGTTATGTCAAGCATGTAAAACAACATGAAAAGAAGCGAGCAAAAGGCACTCATGATAAGCATATACAAAAAACACAACCCATCTCAAACAAATCGAAAAAATGTACTTGTAATGTATGTAAGCAGAAATTTACACAGTTAGAAGATCTTAAGCGTCATATGGAATTGCATTCGGATGAATTTAGTTACACATGTACGACATGCTTTCATAGttttaaaAGACAAGTCAATTTGGAAAGCCATATTAAAACACAACATGCAGAAAATAATATAGAAAACAGTTTAACACAACAATGGACACCCGGCGTTAATATTCCCGAGGAAAATCAATGTGACTATTGCGGAAAACAACTAAGCTCATTTTTCATATATCAGGAACATATACAACGCTTGCATCCAAACGCAAAACCTCCCCATACATGTAAAACATGCAATAAGGGATATTTTACGCTAAAAAGTCTAGCTCGACATGAACGAATAACTCACACTGGTAATAAATGCGATATTTGTTTGAAAAGTTTTAGAAGCTTGTCAAAACTAACACGACATAAAGTGTTGCACTCTGACCTTCCACCACAGCATTCATGTCCGATATGTCCAACTAAATTTCGACATAAAGGCAGTTTAGACTTTCACATGCGCTGTCATACAAACAAGGAAATATTTGTATGCGCTACATGCAATAAGGAATATTCTACACGTAGCAGTCTAACCCGACATGAAAGAAAAACTCACTTCATTAATGATATATCTCATAAATGTGACATTTGTTCGGCTAGTTTTCAAACATTGATACAATTAAATCGCCATAAAGTAGTGCACTCTGGCCTTCCACGACAGTATTCATGTTCGTTATGTCCAGTTAAATGTCGACGCAAAGGCAGTTTAGACGCTCACATGCGCATTCATTCAAAAGAGAAACTATATACATGTGAAATATGTTTAGAAAAATTTGATCATCCAAATTCAGTTTACAGACATACTAAAAAATTTCATAGCGATACCACCGCATTTGGGAATGTTGACCCACTACAAGAAGAGGATTCAGAATTAATTAATGATGATCAATTACAAAATGATTGTGCAGAATCTTCTGAAAATGAATCAAACATGTGTATTGATTTTCCACAAGAAAGTCAACAGCAACTACCAACCACAtctaaaacacaaattaaaaatgCTAAATGCTCTATAAGTCCACAAGATATTTTAAATGATAGTTCCAAAGCTATATCATTTTCATTGCCGATGGAATGTATTCTTAAAGATGGTTCGAATTCTTCTACATCGACGACTACCGAATCAAATTTCATTGAAAGtatcaaaatggaaaaaaatcccATAACTGAGTTTAGCAGTCATGACTATTTGGACATCCATGTTGAAAAACATCATCCAGAAAGTAACATACATCGCCAATGTAGTACAACACAACAATGGAGACCCGACGTTAATATTCCCGAGAAAAATCAATGTGATTATTGTGGTGAACAACTAACAACATATTATTTATATAAGAAACATATACAAAGCTTTCATCCAAATGATAAACTGGACCATAAATGTAATAAGtgcaaaaagagttttttaacaCTTAAGAGTCTAACTCGACATGTAGGCCGAAAACACTCCGGTAATGATAGACCTTATAAATGTGATATTTGTCCATATACTTTTAAAACCTCGACACATTTGACACAACATAAAGTGGTGCACTCTGACCTTCCACCACAGTATTCGTGTTCGTTATGTTCAGCTAAGTTTCGACACAAAGGTAATTTAAACGTTCACATCCGCAAACATGCACAACGATGGAAGCCCGGAGTTAATATTCCCAAGGAAAACCAATGTGATTATTGTGGCAAACAACTGCAAACACTTTTAGCATATCAAGGACATATACAAAACGTACATTCAAATGAAAGCCTTAAACGCATTGATAATGATAGACCTTTTAAATGTGATGTTTGTTCATTTAGTTGTACACTacttcataatttaaaaaaacataaagtGTTGCATTCTGGTCTTCCACCACAGTATACATGTTCGATATGTCCAGCTAAATTTCGACGTAGAAGCAGTTTAAAAGATCACATGCGCGTTCATACACAAGAGAAACTATTTAAATGTGCCACATGCTTGGAAGAATTTGTCCACTTCAACTCACTTAAAAGACATATTAAAACATGTCACTATGGTACCACCGCATCTAGGAATATAAACCCACAAGAAGTAGATCAATCAGAATTAATTAAAGCTAATCAAATAAAAGATACCCTTTCATCTGCTGATATGAACATTTCGAATAAAGACGAGTTAAAACTAACTAAAGATAATCAAGAAACGAATATTGTTGAACTTACAGGGGATGATCATAAAATTTGCTCTTCATCTTTTAATGAAGAAAATTCGAGGGATTCTCAGAATGCACAAGAAGACGATGAATCAGAATTAATTGAAGCTAATGAAATAAAAGATTCCCTTCCGTCTTCTGATATGAACATTTCGAATAAAGACGTTGTAAAAGATAAAGATAATCAAGAAACGAATATTGTTGAACTAACAGGGGAtgatcaaaaaatatgtttttcgtCTTTTAATAAAGGCATTTCACGGGATTTCCAGAGAAGCGCACCTAAAAGAAACAAACTTAACAGATGGGCGACAtataaaaatcatttacaaagTCATACAACTAACAAACTACCTGTAGTTAATATTCCCCAGAAAAATCAATGTGATTTTTGTAGCAAACAACTGAAATCATCTTTTTCACATCAAAAGCATATACAAAAATTTCATCCAAATGAAAAACCACTACCTGTAGTTAATAGTCCCAAGAAAAATCGATGTGATTTTTGTGGCAAACAACTGAAATCATCTTTTTCACATCAAAAGCATATACAAAGATTTCATCCAAATGAAAAACCACTTCATAATTGTCAAATATGCAATAAGAGATACTTTAATCTAAGCAGCCTAATTAGACATGAAAGCCTACAACACTCCAGTAATGAGAGATATAAATGTgatatttgtttaaaaagttttaaacacTTGTGGCGTTTAAGACGACATGAAGGGGTGCACCTTCCACCACAGCATTCATGTTCGATATGTTCAGCTGAATTTAGGAACAAAGGCAATTTAATCGTTCACATGCGCAGTCATTCAAAAGGAACACCACTTAAATGTGGCATATGTTCAGAAGAATTTGTCCACCCAGATTCACTTAAAAGTCATACTCAAACATTTCACTGCGATACCATCGAATCGGGAAATACTTTTATGCTAGTAAAAAATGAAACGGATTTAATTAATAATGATTATCGCTTAGAAGATTCCCCGTCATTTTCCAATAAGCACATTTCCACTAAAGATCTTGTAAAACTTGACAAAGATGATTATATGGATTTTTCTGAAGAAAGTCAACAACAATTACCTTCCACATCTAAAAGGCAAATGGAGAATGCTAAATGCTCTATAATTCCACAAAATATTGTTAATGAGAATTCCAAAGCTATATCGTTTTCAGTGCCTACGGAAAATATTCTTAATGACGCTTCAAATTCTTCTACATCGAATTCTGAATCGAATTTCATTGAACTTATCAAAGTAGAGGAATATCAGATAGTTGAGCAAAATGTTAAAGAATTAAAAACTGAAGATTTTGTTTAA
- Protein Sequence
- MKKSKFRELKPLHIRIKEYKEARIRIFGEVSNRIRKARERYKKRKRIRKEISSASLYEGEDTRFYSKLTINGQEIEGLLDSGATVTCLGRDCLKFVERANLVMHAFNSFIKTADGSPHKIVGRVKANVEFNKLNKIICFYLVPTLNRELFLGKDFMKSFNLFGQVGSLTTNDVSLCDEAEPDSLEVKNHVLLPYQQRHLDSAIALFPCYTEKGLGKTHLEIHSIDTRDATPVKDRHYPVSPAVQKLMYAELDRMLDLGVIEPSESPWSHPVTLVRKGEKNRLCLDARKLNTLTVKDAYPLPHIEGLLSRLGDTYFISSVDLKDAFWQIPLEESSREKTAFTVPGRPLYHFTVMPFGLCNAAQRLCRLMDKVIPAVLRDRVFVYLDDLLVVSPDFNTHLELLNRVSECLDRAGLTINVGKSKFCFKELRYLGYIVGGGKLKPDPAKIESILKYSYPKTAKQVRSFMGATDQAKVAFDNLKSALTTSPVIVHPDFSKHFYVQCDASDIGIGAVLFQKDESEGEHPIAYFSQKLSPAQRNYSVTERECLAVVMAIKKFRAYIELMPFTIITDHSSLKWLMSHKDLSGRLARWSLHLQSFSFSVEHRQGKQNVVPDTLSRYDMEEVSMVMDTLIDLESDAFKSEHYLELIEKIRTNSEQLPDIKIVDNLVYKRTLPYDGVPLNEDFCWKLWVPLELTDSIIRNAHEPPQAAHGGFHKTLRRTREYFYWPNQSSQVRSFIQKCQVCKEAKPANTVLRPPMGNESIVDRPFQRIYIDFLGPYPRSKAGNCFIFIVLDHLTKFVLLKAMAKANTKNVVRFLISEVFHKFGTPETIVSDNGKQFISKEFADVIKNFGINHMRTATHSPQANASERVNQSILAAIRSYLKEDHGDWDKYLSEIECSLRSSVHNSIGVTPYFALFDTIATMDLEVCRICGGNTKLKSILDQEPERAQSLKSANIQKGFREVSLSSFICQQCDQHLDLSHKLRQQSAETASPLKKEIKIKNEPAFVEEPARESIVETTNSSISCKQEIMVDTQSTSKSSSVQMALETSAASSNNVAWNKEIKPINLPLKIEPSDMDEDFPMDNNSNPVLANESSNVFEVYEFLEAHSPSFTLAQNDIKIEEVKLVLPDQISIDEGNNAAESQNYLQMQQSERTSFVNNSSIDNDTSPSSDSDTIDSEDLSLSSLSKSRRKTGHLSPLTCPTCSKVLHSQKGYVKHVKQHEKKRAKGTHDKHIQKTQPISNKSKKCTCNVCKQKFTQLEDLKRHMELHSDEFSYTCTTCFHSFKRQVNLESHIKTQHAENNIENSLTQQWTPGVNIPEENQCDYCGKQLSSFFIYQEHIQRLHPNAKPPHTCKTCNKGYFTLKSLARHERITHTGNKCDICLKSFRSLSKLTRHKVLHSDLPPQHSCPICPTKFRHKGSLDFHMRCHTNKEIFVCATCNKEYSTRSSLTRHERKTHFINDISHKCDICSASFQTLIQLNRHKVVHSGLPRQYSCSLCPVKCRRKGSLDAHMRIHSKEKLYTCEICLEKFDHPNSVYRHTKKFHSDTTAFGNVDPLQEEDSELINDDQLQNDCAESSENESNMCIDFPQESQQQLPTTSKTQIKNAKCSISPQDILNDSSKAISFSLPMECILKDGSNSSTSTTTESNFIESIKMEKNPITEFSSHDYLDIHVEKHHPESNIHRQCSTTQQWRPDVNIPEKNQCDYCGEQLTTYYLYKKHIQSFHPNDKLDHKCNKCKKSFLTLKSLTRHVGRKHSGNDRPYKCDICPYTFKTSTHLTQHKVVHSDLPPQYSCSLCSAKFRHKGNLNVHIRKHAQRWKPGVNIPKENQCDYCGKQLQTLLAYQGHIQNVHSNESLKRIDNDRPFKCDVCSFSCTLLHNLKKHKVLHSGLPPQYTCSICPAKFRRRSSLKDHMRVHTQEKLFKCATCLEEFVHFNSLKRHIKTCHYGTTASRNINPQEVDQSELIKANQIKDTLSSADMNISNKDELKLTKDNQETNIVELTGDDHKICSSSFNEENSRDSQNAQEDDESELIEANEIKDSLPSSDMNISNKDVVKDKDNQETNIVELTGDDQKICFSSFNKGISRDFQRSAPKRNKLNRWATYKNHLQSHTTNKLPVVNIPQKNQCDFCSKQLKSSFSHQKHIQKFHPNEKPLPVVNSPKKNRCDFCGKQLKSSFSHQKHIQRFHPNEKPLHNCQICNKRYFNLSSLIRHESLQHSSNERYKCDICLKSFKHLWRLRRHEGVHLPPQHSCSICSAEFRNKGNLIVHMRSHSKGTPLKCGICSEEFVHPDSLKSHTQTFHCDTIESGNTFMLVKNETDLINNDYRLEDSPSFSNKHISTKDLVKLDKDDYMDFSEESQQQLPSTSKRQMENAKCSIIPQNIVNENSKAISFSVPTENILNDASNSSTSNSESNFIELIKVEEYQIVEQNVKELKTEDFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -