Basic Information

Insect: Pegoplata infirma
Gene Symbol: -
Assembly: GCA_963921195.1
Location: OY992540.1:214048954-214052158[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 7e-06 0.0006 21.5 1.9 2 23 221 242 220 242 0.97

2 12 0.00021 0.018 16.8 2.1 1 23 248 271 248 271 0.96

3 12 0.00096 0.082 14.7 0.0 1 23 283 305 283 305 0.97

4 12 0.14 12 8.0 4.4 1 20 310 329 310 333 0.96

5 12 1.6e-05 0.0014 20.3 0.5 1 23 339 361 339 361 0.98

6 12 1.4e-06 0.00012 23.6 0.8 1 23 367 389 367 389 0.99

7 12 1.6e-05 0.0014 20.3 1.7 1 23 395 417 395 417 0.95

8 12 2.8e-05 0.0024 19.6 1.9 1 23 422 444 422 444 0.97

9 12 6.7e-05 0.0057 18.4 1.3 1 23 450 472 450 472 0.96

10 12 1.5e-05 0.0013 20.4 4.7 1 23 478 500 478 500 0.99

11 12 5.3e-05 0.0045 18.7 0.5 1 23 506 528 506 528 0.97

12 12 0.0016 0.14 14.0 3.2 1 23 534 556 534 556 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	7e-06	0.0006	21.5	1.9	2	23	221	242	220	242	0.97
2	12	0.00021	0.018	16.8	2.1	1	23	248	271	248	271	0.96
3	12	0.00096	0.082	14.7	0.0	1	23	283	305	283	305	0.97
4	12	0.14	12	8.0	4.4	1	20	310	329	310	333	0.96
5	12	1.6e-05	0.0014	20.3	0.5	1	23	339	361	339	361	0.98
6	12	1.4e-06	0.00012	23.6	0.8	1	23	367	389	367	389	0.99
7	12	1.6e-05	0.0014	20.3	1.7	1	23	395	417	395	417	0.95
8	12	2.8e-05	0.0024	19.6	1.9	1	23	422	444	422	444	0.97
9	12	6.7e-05	0.0057	18.4	1.3	1	23	450	472	450	472	0.96
10	12	1.5e-05	0.0013	20.4	4.7	1	23	478	500	478	500	0.99
11	12	5.3e-05	0.0045	18.7	0.5	1	23	506	528	506	528	0.97
12	12	0.0016	0.14	14.0	3.2	1	23	534	556	534	556	0.96

Sequence Information

Coding Sequence: atgactaaaattttctTGGGTCGTATTTGTCGTACCTGTTTAACAAAATCATCAGAAATGcataaattaagaaaatacatTGAAGACGATCTACAAATTGAAGATATGCTTAGCCAAGCCATACCCAACTATGATCTGGAACTGGAGGATAAACCACTACCGGTGGAAATTTGTAGCGATTGTTTGGGGGAATTACGTATATCCTATAAATTTCAACGAAAGTGTATGGAAACTAATAAACAGCTGAGAAAGATGTTGACAGATCCGGAAAGTGATGAGGAAGAAGATGAGCTAATAACCGAGTGGGAGGATATTAATAGTACAGATGATTTTTTAAAGGAAACTGATATTTTAATGGATAATTTCAAAAAAGAACCTTCAGATGAGGTGTCCAACGAAAGTCGTACGTACCCCAGGGATCCAATGTCAGAAATGGCAGATGTCTTGAGTTTCCAAATAGATGATGTTAAACTTGAAATTAGTTTGGAAGATAAAAAGATATCTAGTGATGATGATAATAGTTCCGAAGAATATTGGCCAAACGAAGACAAAGAGGATAGTGAAAGCAATTTCATTGAAAATACGATTAAAAATTCGACAGACGTTAAGCCTAAGAGGAAATATCGTAGAAAAGTACCATTAAAGCCAGCAAGTAGTAAAACTTGTACTGAATGCAATAAAACATTTGCTAAAAGGAATCTTTTAACACGTCATATGTCGGTACATTCAATGGaaaatgaatttgtatgtaaCATTTGTAAATATCGCTTCTCCAATGAAAGGCAAATGAAAACACATATAACAAGTAGACATATGGGTTTGGAAATAAGTTTAGCTGGTGGCCCCTATCCCTGTCCAGATTGTCCTATGATATTTGAGCAAACCAGAGCATTGTCAGCACATAGAGTCATGCATTTAGAAAGAGATTTCAAGTGCGAAGTGTGTGGTATAAATTGTAAAACAATGGCAGCGGTAACTCGACATATGCATTGTAAACATCCTGATGTATTGCCATACAAATGTCAAATGTGCGATAAAGCTTTTCCAGTAGAATCACATTTAAATGATCATGTAAATGAGCATTTaggacaaaaaaaatacaaatgtgACATGTGCGAAAAGAGTTTTCCGAACACTACCGCTTTAAAGGATCATCTGCGTACTCATACTGGTGAATCACCATTTTTATGCTCCCATTGTGGTAAATCCTTTAAAACAGCTAATGTTTTGCGTCAACATATTGCCAGACATGGGGAAAAAAATTTCCATTGTCCAGAATGTCCTATGAAATtttatgttaaagttaatttaacaaaacatATGACCTCACATTCAAAAGTTAAACGACATGTTTGTGATGTATGTGGTTCAGCCTTCACTCGACAGGATTCTTTAAAAGCTCATAAATTTAAACATAGTGGGGAAAGGCCCTTTAAATGTGAGGATTGTAATATGAGCTTTGTTTTTAAGCGTCATTTGAAAAGACATAGGATCACACATACTGGAGAAAAGCCTCACATGTGTTCCTATTGCGATCGTGCTTATGCTGCAAGTGGAGATTTGGTTAAACATTTACGTACACATATTGGCGAGAAAACCTATTTTTGTGACGAATGCCCGCAATCATTTAAGTATTGTCAAGATCTAAAGGATCATAAAAATGAACATTATAAAGAAAAATTAGGAATACAACAAAAAGTTGAAGTTGTAGAAAATCCACAAGATAATGAAACGGTagttaacttaaaacaaaaaaatgaggATTTAGTGAATACACAAGAAGATGAGGACATTGTGCTAAGTCTACAACAAGATATTATTAatattgtaaaacaaaattaa
Protein Sequence: MTKIFLGRICRTCLTKSSEMHKLRKYIEDDLQIEDMLSQAIPNYDLELEDKPLPVEICSDCLGELRISYKFQRKCMETNKQLRKMLTDPESDEEEDELITEWEDINSTDDFLKETDILMDNFKKEPSDEVSNESRTYPRDPMSEMADVLSFQIDDVKLEISLEDKKISSDDDNSSEEYWPNEDKEDSESNFIENTIKNSTDVKPKRKYRRKVPLKPASSKTCTECNKTFAKRNLLTRHMSVHSMENEFVCNICKYRFSNERQMKTHITSRHMGLEISLAGGPYPCPDCPMIFEQTRALSAHRVMHLERDFKCEVCGINCKTMAAVTRHMHCKHPDVLPYKCQMCDKAFPVESHLNDHVNEHLGQKKYKCDMCEKSFPNTTALKDHLRTHTGESPFLCSHCGKSFKTANVLRQHIARHGEKNFHCPECPMKFYVKVNLTKHMTSHSKVKRHVCDVCGSAFTRQDSLKAHKFKHSGERPFKCEDCNMSFVFKRHLKRHRITHTGEKPHMCSYCDRAYAASGDLVKHLRTHIGEKTYFCDECPQSFKYCQDLKDHKNEHYKEKLGIQQKVEVVENPQDNETVVNLKQKNEDLVNTQEDEDIVLSLQQDIINIVKQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -