Basic Information

Insect: Pegoplata infirma
Gene Symbol: Pol
Assembly: GCA_963921195.1
Location: OY992540.1:86394677-86419171[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.054 4.6 9.2 0.8 2 23 874 896 874 896 0.95

2 15 0.32 27 6.8 1.9 1 16 1019 1033 1019 1041 0.77

3 15 0.00083 0.07 14.9 8.9 1 23 1076 1098 1076 1098 0.98

4 15 0.0027 0.23 13.3 9.0 1 23 1104 1127 1104 1127 0.97

5 15 0.002 0.17 13.7 5.1 1 23 1152 1175 1152 1175 0.93

6 15 5.2e-07 4.4e-05 25.0 2.1 1 23 1194 1216 1194 1216 0.98

7 15 8.1e-05 0.0069 18.1 6.3 1 23 1222 1245 1222 1245 0.98

8 15 0.0033 0.28 13.0 2.1 3 23 1259 1279 1257 1279 0.98

9 15 5.2e-07 4.4e-05 25.0 0.8 1 23 1285 1307 1285 1307 0.99

10 15 1.8e-05 0.0016 20.1 3.8 1 23 1330 1352 1330 1352 0.98

11 15 5.2e-05 0.0044 18.7 3.8 1 23 1358 1381 1358 1381 0.97

12 15 0.00047 0.04 15.7 4.2 1 23 1390 1412 1390 1412 0.98

13 15 0.00021 0.018 16.8 1.9 1 23 1418 1441 1418 1441 0.96

14 15 0.0023 0.2 13.5 6.7 1 23 1444 1466 1444 1466 0.97

15 15 1.8e-07 1.5e-05 26.5 0.8 1 23 1472 1494 1472 1494 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.054	4.6	9.2	0.8	2	23	874	896	874	896	0.95
2	15	0.32	27	6.8	1.9	1	16	1019	1033	1019	1041	0.77
3	15	0.00083	0.07	14.9	8.9	1	23	1076	1098	1076	1098	0.98
4	15	0.0027	0.23	13.3	9.0	1	23	1104	1127	1104	1127	0.97
5	15	0.002	0.17	13.7	5.1	1	23	1152	1175	1152	1175	0.93
6	15	5.2e-07	4.4e-05	25.0	2.1	1	23	1194	1216	1194	1216	0.98
7	15	8.1e-05	0.0069	18.1	6.3	1	23	1222	1245	1222	1245	0.98
8	15	0.0033	0.28	13.0	2.1	3	23	1259	1279	1257	1279	0.98
9	15	5.2e-07	4.4e-05	25.0	0.8	1	23	1285	1307	1285	1307	0.99
10	15	1.8e-05	0.0016	20.1	3.8	1	23	1330	1352	1330	1352	0.98
11	15	5.2e-05	0.0044	18.7	3.8	1	23	1358	1381	1358	1381	0.97
12	15	0.00047	0.04	15.7	4.2	1	23	1390	1412	1390	1412	0.98
13	15	0.00021	0.018	16.8	1.9	1	23	1418	1441	1418	1441	0.96
14	15	0.0023	0.2	13.5	6.7	1	23	1444	1466	1444	1466	0.97
15	15	1.8e-07	1.5e-05	26.5	0.8	1	23	1472	1494	1472	1494	0.98

Sequence Information

Coding Sequence: ATGGCCAGCGCTGATCTAGCACCTTGCTTAACATGGATGACTCTGAGCTCCCCGGAGGTAGGAGATCATTTTCCAATAATGATAACAGATAATAAAGATCCCTTCAAAAAGCGATTTCATCCAAGGTTTTTAGATAACAAAGCTGATTGGCTTACTTTTTCTATGAAAGTTTCCAACAATATGACAGATTTTCCAGAATCTACGAACATTAACAGAGAAGCAGCACAAATCAAAAGAATCATCAGGAAAGCAGCTAATGAAACCATACCACAAAGCAATAAACCTAGAACGAGACACTCTCCAGCCTGGTTTAACTCTACAATTGCCCATCTGATCAAAGATAAGCATAAAGCTTGGAACACTTTCAAAATCCACAGAAGCCAGCAAAATGCACTCATCTTTAGGAGAACATGCGCCTTAGTTAAACGAGAATCCAAAATTGCTAAACGTCAAACATGGAACAATTTTTTAAACTCAATCAACCCTATGTTAGATATCAGAACTTTATGGGCAAAAGTTAAAAACATCAGAACCGAAAAGAGAAATTATTTTCCATCCATCATAGATGATAACGTAACAATAAACAATCCTCTTGAAATAGCCAACAAATTTGCACAGGTATGGTGTTCCATAGGATCTGATAATGTGTTTAACCCCAATATTGTAGCAGATAAACGTAAttacatcaaaaacattaataatAATGTGAACAGTGGGAATACCTTTTTATGTGGAGATTTTAACGTCGATGAACTTAACCTAGCTCTCAGCAAAGCAAAAGGTACAACACCATCCATAGATCGTATTACTTATACTATGATCAAAAATTCACCTCTTGAGCTAAGGAAACGAATGGTTAAACTATACAACAACATCCTTCTAAGCGGTATATACCCTCATGATTGGAAAGTAGCACTACTCACACCCATTCCTAAGCCAGGAAAAAATCCAAACAAACTTGAAGGGTATCGACCTATATCATTAATTCcggttttatcaaaaatattggaaaagttAATAGCAATAAGGTTCTGGAAACAGGCCAAAACAAATATATCTCCATTACAACATGCCTTCCTGCCTAAACATGGTGTACACTCGTTATGCCATCAACTTGAAAGTGTACTCAGATATAATCTGTCAAAGGGAAAACATAATGTGGTTATTTCAGAAGATATTGAAAAGGCCTTCGATCGTGTGGTATCGACATTCGTGCTGGACGAATTAAGAGATTGGGGCATATCTTTTCCAATTATAAAGCTAATCCATTCTTTTCCATCACATCGCATGGTTAAAGTCAAAATAGATGGTTATCTATCACAATTATACCCTTTAGACAATGGAGTGCCTCAAGGTTCTCCTTTGTCTGTTGTTTTATTCACTGTTTATGTAAACTCCTTGGCTAAGTCAATTAAAAGTCTACAAGGTATCGACTATTTTGGGATATATGCTGACAATATATTCGCTGTTGCATCCGGTAATCCTGTTGAAGTGTCATCTAATTTGAACCTGCTAAACAACAAAATTCAAACATGGGCATCTACTCGAGGAGCTGTAATTCCAGAAAATAAAACGGAGCTGCTTCACGTATGTAAACGAAGAAATTGCTGCACTACTAGTGTGACTGTCGGTGGCTCTGTGCTACTTTGTAAAAATGAGTTAAGAATTCTTGGTGTAACATTTACAAAGAACATGCTTTGGAATGTACATATTAAAAATGTAGTGGCAAAATTGAGCAGAATCAACAACTTATTAAAATTAATATGTTCAAAACAAAAAGGGCCACATATAGAAACAGCTATTGACATATGCAGATCCCTTGCACATGGGGCGGTCCAACATGGCATAACCATGTACGGTTGGACTTGTAAtaataatgttaaaaaattagACGCATCCTTAAACAACTGCTTTCGCACAGCTACTGGTCTGCTGAGGACTACACCCCTTCCATCTCTAAGAGTTGAGTCAAGATCATCAGATTTTAATTCACTCCTGACCAAAAGATCGGTGAGTTTGGCTTCGAGACTTGAGATTCCATTGCCTGAAAAACCAAAAGAAAACCTAAATCCAGAATCTAAGGTATTAATAGACCTAAGCTTATCTACTCACAATAAGTCAAACACAAGCCCTGAAGTCTATAAGTCGATGGTTATAGAAAAAATCGATACTTTTTCAGCAGATACTGTTCTATTCACGGATGGATCCTTCAAAAATGGTCTAACCGCCTACGCAATTGTAAAACTGGAGTCCAACTCGAATTGGAGTATAATCAAACAAAGTCAACTGCCTGAATTTTCAGaagaattttatataaataatgaaTGTTCAATAAAACAAGAAGATGAATTTCCCGCAAACAATGAAATGCTAATTGAGGATTCCGATGAGGACTCTGTACATATGTTGGCTGATGAGGAAGTGGTGCTCATTGAGGATTCCGATAGAGATTCTATGCATATGTTACCGGATAAAATCTCTCAAGAAATATCTGAAGATGACAAAAGTCATATTTACCCGACAGATCGATTTATATATGATTCCAGTACAGATGAATCTCAAACAGGAGACGCCATCGACACTGAATCTTTTGCTAAAAGATATCTTTTAACGGATAATACTTGTACTATTTGTGAAATGGAATTTAAATTTCGTATGGATTTTGTCCAACATATCAATCAATTTCACCCTACTGAGAATTCATTAATAAGTGAACAAGTTGAACTGACATCGGATAATAAAGATTTGCGTGATCCACAAACGATAGTAGACTTTAAACAAACGCAAAATGGGGGAAATGATAAAACAGCTTTAAAAGATTTCGAACAATTACTTGAAATTAAAAAAGAAGATGAAGAACATAATTCGGACAATGACACTCGACATATTTTCGATctattggaaatttctaaaacagAGTTTCCAGAAATAAAGCATCCAGAAAGTCAGTTGGAGGATAATTCCATTAAAAATAAACTTGAGTATGAGTCTAGCTCAACAGATTTAGAGCAAATGCAAGACACTGATGATGAGGACTATTTGCCAGAAAACATATACCAGTGTGGAGTTTGTCAAAAGgtaTTTAACTATCAAGGTCTTGTCCAGCATTGTAAACAAGATCATCCTAATATTGATGATTTTAAATGCCAATTTTGTATGattttattttccaatttaataACATTATCATGTCATATGAGAATTCATACAGCAATGTCAAAGAAATACATGTGtaaattttgttacaaaaactttAATCACAAATCTCATTTGCAACTTCATTTGAGAAAACATACTGGAGAACGACCATATCGGTGTAATTCCTGTGACAAATCCTTTAAACAAAAGTGCCATTTGAATGAACATTTTAAGCGTAGACACATTAAAGGGGAAAACAAAGGCGATAAAAATGCTGTTAAAGATTTATCAAGTAAACAATTTAATGAACGGCCTTACAGTTGTTCTGTGTGTAAAAAAGCTTTTAagcaaaatattcatttaaagaATCATTTTTTCCGAAAGCATTTTAACGCCGTTCAGCAATCGGATACTATTGGTTCAAAATGGGAGCTTAAACAATACTCATGCGAATTGTGTTTTAAGTCCTTTGATCAGAAATCTAATTTGAAATCTCACATGAGGATTCATACGGGCGAACGTCCTTATCGTTGTTCGTTTTGTGAAAAATCATTTACCCAGAGTTGTAATTTACAGAATCATCTGAAGAGAAAGCACATGAAAGATGGTAACGCTGATGCATTAAGGAAATATGGTTGCAATTTGTGTCCTAAATTCTTCAATTGTAGATCAAATTTAATAAATCACTTGAGGATTCATACTGGAGAACGTCCATACCGCTGTGATATGTGTGAAAAAACTTTTAATCAAAAAGGTAATTTGCAGCAACACATTGCAACCCATTTAAATGGAAACCCAACAAATGTTATTGAATCGAATAATAATATTGCAAATGCTGTAGCAGGCGAATATGTTTGTGAATATTGTTTCAAGTGCTTTACTTTTAAATCATATTTAATAATTCACTTGAGGATCCATACGGGGGAACGTCCCTTCAATTGTTCTCTGTGTGAAAACACTTTTAGTCAAAAAAGTAATTTGCATCAACATATTAGGACAACACACAAAATGGCTGAGTTACCCAAACGACACTATTGTAAAGTGTGTGGCATGTCCTTTGAAAAATACTCCTTTTTGAAAACACACTTAAAGACACATGCTGATGAAGAACCTTACCATTGCAAAATATGCACGCAAACTTTTGTACAAATGGATCAATTGGAGAAACATATAGAAAGTAGGCATTATAAACACGTTTGTAAGGTTTGCTTAAAGTGCTTTGATAGTAAACATATGTTGAAACGTCACCTTTTAGTACATACCGGGGAACGTCCTTATCCTTGTACCCTGTGTGAAAAAGCTTTTAATCAAAACTCAAATTTACAGTCACATATGAGATCCCACATTAAAGAGAATTCAATTGATAATATAGAGGTGTTAAATTTTCAAATCCCAATAAATGATGACAATCAACTTCAAGAACGTTTGTTGGAAATAAACGTTTGTGATAATGAAGAGGTGTTGAAATGCCATACTGTCGTAAATACTAAGGAACACTCTTCTCCCCGTCCCTTGCAGTTGCATATGAAATCCCACTTGAGAGAAAAGTCGATTGACAATACAGAGGTGCGTACTACAGTGGCGTTGTTTATGTTATGGTGTAGAATTCTTTATTTAATCTATCTATATTGTTAG
Protein Sequence: MASADLAPCLTWMTLSSPEVGDHFPIMITDNKDPFKKRFHPRFLDNKADWLTFSMKVSNNMTDFPESTNINREAAQIKRIIRKAANETIPQSNKPRTRHSPAWFNSTIAHLIKDKHKAWNTFKIHRSQQNALIFRRTCALVKRESKIAKRQTWNNFLNSINPMLDIRTLWAKVKNIRTEKRNYFPSIIDDNVTINNPLEIANKFAQVWCSIGSDNVFNPNIVADKRNYIKNINNNVNSGNTFLCGDFNVDELNLALSKAKGTTPSIDRITYTMIKNSPLELRKRMVKLYNNILLSGIYPHDWKVALLTPIPKPGKNPNKLEGYRPISLIPVLSKILEKLIAIRFWKQAKTNISPLQHAFLPKHGVHSLCHQLESVLRYNLSKGKHNVVISEDIEKAFDRVVSTFVLDELRDWGISFPIIKLIHSFPSHRMVKVKIDGYLSQLYPLDNGVPQGSPLSVVLFTVYVNSLAKSIKSLQGIDYFGIYADNIFAVASGNPVEVSSNLNLLNNKIQTWASTRGAVIPENKTELLHVCKRRNCCTTSVTVGGSVLLCKNELRILGVTFTKNMLWNVHIKNVVAKLSRINNLLKLICSKQKGPHIETAIDICRSLAHGAVQHGITMYGWTCNNNVKKLDASLNNCFRTATGLLRTTPLPSLRVESRSSDFNSLLTKRSVSLASRLEIPLPEKPKENLNPESKVLIDLSLSTHNKSNTSPEVYKSMVIEKIDTFSADTVLFTDGSFKNGLTAYAIVKLESNSNWSIIKQSQLPEFSEEFYINNECSIKQEDEFPANNEMLIEDSDEDSVHMLADEEVVLIEDSDRDSMHMLPDKISQEISEDDKSHIYPTDRFIYDSSTDESQTGDAIDTESFAKRYLLTDNTCTICEMEFKFRMDFVQHINQFHPTENSLISEQVELTSDNKDLRDPQTIVDFKQTQNGGNDKTALKDFEQLLEIKKEDEEHNSDNDTRHIFDLLEISKTEFPEIKHPESQLEDNSIKNKLEYESSSTDLEQMQDTDDEDYLPENIYQCGVCQKVFNYQGLVQHCKQDHPNIDDFKCQFCMILFSNLITLSCHMRIHTAMSKKYMCKFCYKNFNHKSHLQLHLRKHTGERPYRCNSCDKSFKQKCHLNEHFKRRHIKGENKGDKNAVKDLSSKQFNERPYSCSVCKKAFKQNIHLKNHFFRKHFNAVQQSDTIGSKWELKQYSCELCFKSFDQKSNLKSHMRIHTGERPYRCSFCEKSFTQSCNLQNHLKRKHMKDGNADALRKYGCNLCPKFFNCRSNLINHLRIHTGERPYRCDMCEKTFNQKGNLQQHIATHLNGNPTNVIESNNNIANAVAGEYVCEYCFKCFTFKSYLIIHLRIHTGERPFNCSLCENTFSQKSNLHQHIRTTHKMAELPKRHYCKVCGMSFEKYSFLKTHLKTHADEEPYHCKICTQTFVQMDQLEKHIESRHYKHVCKVCLKCFDSKHMLKRHLLVHTGERPYPCTLCEKAFNQNSNLQSHMRSHIKENSIDNIEVLNFQIPINDDNQLQERLLEINVCDNEEVLKCHTVVNTKEHSSPRPLQLHMKSHLREKSIDNTEVRTTVALFMLWCRILYLIYLYC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -