Pinf037670.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- ZFX
- Assembly
- GCA_963921195.1
- Location
- OY992540.1:86654998-86663096[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2.3 2e+02 4.1 2.0 3 23 4 25 3 25 0.94 2 18 1.3e-06 0.00011 23.8 0.7 1 23 33 55 33 55 0.98 3 18 1e-06 8.9e-05 24.1 2.0 1 23 61 83 61 83 0.98 4 18 0.03 2.5 10.0 3.1 1 21 89 109 89 112 0.95 5 18 0.13 11 8.0 2.0 2 23 200 222 200 222 0.95 6 18 0.16 14 7.8 0.6 1 23 232 254 232 254 0.95 7 18 0.001 0.085 14.7 1.5 1 23 260 282 260 282 0.98 8 18 0.00012 0.0098 17.6 0.7 1 23 287 309 287 309 0.97 9 18 0.0065 0.56 12.1 3.2 1 23 338 360 338 360 0.99 10 18 0.0033 0.28 13.0 8.6 1 23 366 389 366 389 0.94 11 18 0.00084 0.072 14.9 4.3 2 23 485 506 484 506 0.97 12 18 1.1e-05 0.0009 20.9 0.4 1 23 512 534 512 534 0.97 13 18 0.012 1 11.3 0.7 1 23 540 563 540 563 0.95 14 18 0.43 36 6.4 8.3 1 23 680 702 680 702 0.98 15 18 8.9e-06 0.00076 21.1 3.1 1 23 708 730 708 730 0.98 16 18 1.7e-06 0.00014 23.4 4.3 1 23 918 940 918 940 0.97 17 18 3e-05 0.0026 19.4 2.0 1 23 946 969 946 969 0.97 18 18 0.00091 0.077 14.8 7.4 1 23 975 998 975 998 0.97
Sequence Information
- Coding Sequence
- ATGGAGAATTGCAAAATTTGTAATGAGctTTTTGTTTGTAAGCAAGATCTTGTCAAACATGTTCAACAATTTCATCCTAATAGTGAAATACGACTCTATCCATGTTCTGTATGTGATAAATCGTTTAAAACCAAGGCTGATTTGGATCGTCACTTTAGAATACACACTGGAGAACGTCCATACTCCTGCCATTTATGTCCCAAATCATTTACTCAAAAATATAATTTGACACTACATTTAGCAGTGCACGCCAAAGAATTTCCATACACTTGCTTATTATGCGCAAAAGGTTTTAAACTAAAAACTAGCTTGAAACGTCATCAACAGTGTGTTCACTCCGGTGAAGCAAATGATTCTGTAGAAACTTATGTTGAAGATAATGTTGTAAATATGTTTGAGATTAAGGACATGGAAACAAAAGATGTCCAGTATTTATCAGTCAGTCATGAAAATGTAATAGATTGTGATACAGAAGAAGAAAAAATACAGGTTAATGAAGATAACTCAAATATGTATATTATCCCTGATGTTATTGACGAGTCTTATGAGAATACCGATTCGGTTGAAGCTGTAGAATCAAGAGAACAATATGAAGCTAAATGTGGGACTTGTGAAAAGGTGTTTGATTGCCAGCAAAATCTTTCCATTCATATCCAACAATTCCATCCGGATGAATTGATGAAATCAGAGCAAcatatttgtaaattttgttttgaaGTCTTTGACAGCATTACGGATCTGGATAATCATTGGAGTGTCCATACTGACGGTTATCAGTACTCATGTTTTGTGTGTAATAAATTGTTTGATACAAAAAGCCTTTTGGATCGCCATTCCAAAATTCATAATGTGCGTTCATTCCCCTGTTCTGTTTGTGAAAGATCGTTTGCAGATAAACAACAATTGGCTACACATAAGAAGTACCATTTGAATCAAAAtagtacacacacaaaaaaaaactcacaaactATTGCAAAAGAAGATTTCAGAGTTCATACTAATATACTGCAATACCAGTGTTTTGTGTGTAAAAAATGGTTTGACCAAAAAGCCCATTTGGATCGTCATTTTAGAGTTCATAGCGGAGAACGTCCATTCATCtgttctttttgtaaaaaatcgtttaaacaTAAACACCATTTGTTATCCCATCTGCAGGCTAAGCATGCAAAAAGCCCTAATGATATTGATGGTTTATATATAATTAAGGATATAGAAGCAAACAATGTAGAATTGGTATCGACCAATGATCAAGTTGGCGGGCCAGAAAAAACGATTCTTGAAACCCAAATATCAATAAAAGAAGAGGATGAAGATAGCAAGAATTTGCATCATAACACTGAAATATCTGTTAAACAAAAACATCTGCAGACCGATGACTTGACACAAcatattatttacaaaaaaaataacttcgaattttttgctgaaaaagcaaattcccaaactttaacttgtaaattttgtttaaaaaattataaaaacattcATGATTTGAAACGCCACATAAGAACACATGCTGGAGAACTTCCCTTTCCTTGTTCTTTATGTTCCAAATCTTTTAATCAGGCATCTACTTTAAAAGATCACCTTTTGGTACACTCTAAAGTACATTCATACGTGTGCATTGTGTGTGAAAAAGTCTTCAAAAGCATTCCGCATTTAAGAGGACATCAGCAGAGGCAACATCCAGAAACAGAGTTTAATGATTTCTGTGAACCTCAAACGATTTCTGAAAATATAGAAAGCTCAAACTCTGCTGCGTCTATTTATGGCGGATATTTTGATGAACCTCATAGTACTTCTGAAAACATAGAAAAACTAAATTCAACTTCAACATCTTTATATGGTGGAGACAgtgaaaatatatatataattaacgATGTAGAAGAAAAAAATGTACAGTTAGTATCGGCTAATGATGAATTAATTGGCGATCCAGCAACAGATAATACAGTTGTTGCAAGCCAACTATATTTAAACGGGGAGTATGAAGAGGAGTATAATAACActaaaacaacaacaaagaaaaatatctaCACATGTTCGTTGTGTAATATAACCTTTAAGTATAAGTGTCACTTGGAATGCCATGAGAGAATACATAATGTGGAAAGTTCTTACACCTGCACTATGTGCCCAAAATCATTCAAtctaaaaaataatctgaaaaaacatttaaagtaCCATGCTGATCCTAAATCTAATAAACACGAAATTAAAGCCGAGACAGAAATCCAAGATGGTTATCAAAATGATAAATTTATTAATAATGATGAAGGAAACTTTATAAATAGCGCTGTTATTAAAAAAGAGAATAATACGGATATTGACTCTTTTATAGAAATATCTGAGACTAATTACATATACGATGAAGTTTTAGTTAATGCGGCTAAGCGTTTACAAAATAATTCTATTACAACCGATTCTCAAAAAAGGATTATGGAAACAGACTATATGTCTGAAGAAAGATCAAAACTTAGAAATCTTTTGTCAACAGGACGaaatgaagtttgtaaaaatattgaaaataattctTCTACATATGATTCTCAACAAATGCAAGTCGAGGAAACCGACTGTATATCTGAAGAAAGATCAAAGCTTAGAAATCTTTTGTCAGAAGGCAGATATAAAGTATATGAAAAGaagAAAAATGCTGCCGATTTATCACCTCACATCATTACCATACAAGATGATGAAGACGAGAGTAATAACTTTAAAGATGTTGCAAAAAAAGTTCccaaaaaacatgtttgtaaaTTATGTTCCAAAAGTTTTAAAACTAATAGTGATTTAAAACGGCACACAAGAATACACACTGGAGAACGTCCCTTCTCGTGTTCTATATGTTTCAAAAGTTTTAATCAATCATCTACTTTGAACTATCACTTAACGACGGTACACACTGAAGAACGACCATACTCTTGTAGTTTTTGTGAAAAATGCTTTAAAGTCAGTATACATTTAAAGAAACATCAGCAGAGACAGCACCCGGAGGCGGTATTTAATGATTCTGATGAATCTTATATATTTTGA
- Protein Sequence
- MENCKICNELFVCKQDLVKHVQQFHPNSEIRLYPCSVCDKSFKTKADLDRHFRIHTGERPYSCHLCPKSFTQKYNLTLHLAVHAKEFPYTCLLCAKGFKLKTSLKRHQQCVHSGEANDSVETYVEDNVVNMFEIKDMETKDVQYLSVSHENVIDCDTEEEKIQVNEDNSNMYIIPDVIDESYENTDSVEAVESREQYEAKCGTCEKVFDCQQNLSIHIQQFHPDELMKSEQHICKFCFEVFDSITDLDNHWSVHTDGYQYSCFVCNKLFDTKSLLDRHSKIHNVRSFPCSVCERSFADKQQLATHKKYHLNQNSTHTKKNSQTIAKEDFRVHTNILQYQCFVCKKWFDQKAHLDRHFRVHSGERPFICSFCKKSFKHKHHLLSHLQAKHAKSPNDIDGLYIIKDIEANNVELVSTNDQVGGPEKTILETQISIKEEDEDSKNLHHNTEISVKQKHLQTDDLTQHIIYKKNNFEFFAEKANSQTLTCKFCLKNYKNIHDLKRHIRTHAGELPFPCSLCSKSFNQASTLKDHLLVHSKVHSYVCIVCEKVFKSIPHLRGHQQRQHPETEFNDFCEPQTISENIESSNSAASIYGGYFDEPHSTSENIEKLNSTSTSLYGGDSENIYIINDVEEKNVQLVSANDELIGDPATDNTVVASQLYLNGEYEEEYNNTKTTTKKNIYTCSLCNITFKYKCHLECHERIHNVESSYTCTMCPKSFNLKNNLKKHLKYHADPKSNKHEIKAETEIQDGYQNDKFINNDEGNFINSAVIKKENNTDIDSFIEISETNYIYDEVLVNAAKRLQNNSITTDSQKRIMETDYMSEERSKLRNLLSTGRNEVCKNIENNSSTYDSQQMQVEETDCISEERSKLRNLLSEGRYKVYEKKKNAADLSPHIITIQDDEDESNNFKDVAKKVPKKHVCKLCSKSFKTNSDLKRHTRIHTGERPFSCSICFKSFNQSSTLNYHLTTVHTEERPYSCSFCEKCFKVSIHLKKHQQRQHPEAVFNDSDESYIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -