Pinf020724.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pegoplata infirma
Gene Symbol
TUF1
Assembly
GCA_963921195.1
Location
OY992538.1:7008339-7018128[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.13 11 8.1 1.6 2 23 70 92 69 92 0.93
2 21 7.5e-05 0.0064 18.2 2.9 1 23 99 122 99 122 0.96
3 21 1.5e-05 0.0013 20.4 0.7 1 23 127 149 127 149 0.98
4 21 0.00043 0.037 15.8 0.4 1 23 155 178 155 178 0.91
5 21 2.1e-05 0.0018 19.9 1.5 1 23 184 206 184 206 0.98
6 21 8.7e-05 0.0074 18.0 1.0 3 23 214 234 213 234 0.97
7 21 0.02 1.7 10.6 1.3 1 23 240 263 240 263 0.97
8 21 4.6 3.9e+02 3.2 1.6 2 12 380 390 379 400 0.88
9 21 0.0043 0.36 12.7 1.2 1 23 409 432 409 432 0.93
10 21 1.7e-05 0.0014 20.3 0.1 1 23 437 459 437 459 0.97
11 21 0.0056 0.48 12.3 0.6 1 23 465 488 465 488 0.94
12 21 0.00071 0.06 15.2 0.9 1 23 494 516 494 516 0.99
13 21 0.00018 0.015 17.0 3.7 3 23 524 544 523 544 0.97
14 21 0.033 2.9 9.9 1.6 1 23 550 573 550 573 0.97
15 21 1.2 1e+02 5.0 1.6 3 23 687 708 686 708 0.84
16 21 0.00046 0.039 15.7 0.9 1 23 715 738 715 738 0.96
17 21 4e-05 0.0034 19.1 0.3 1 23 743 765 743 765 0.97
18 21 0.00027 0.023 16.5 1.4 1 23 771 794 771 794 0.95
19 21 4e-05 0.0034 19.1 1.4 1 23 800 822 800 822 0.99
20 21 0.00018 0.015 17.0 3.7 3 23 830 850 829 850 0.97
21 21 0.033 2.9 9.9 1.6 1 23 856 879 856 879 0.97

Sequence Information

Coding Sequence
ATGATCGAATTTCAGAACATGATATTTATTCAGTACACCATTGATTTTAAAGGAGAAACTCTATCCGAAGCTATAGAACAATTACATACGTGGTATTATCATAAGAATTGCCGTAAACAAAAATCCGATGCAACGTTGAATAAGGATGAAgagatttatttaaaaatgtgtaaattcttGCCAACAAAAAGATTGCAAGTCAAGCTTGTATGTGAAATTTGCAATAAGAACTTTTATGCGGATCACAATTACAAGTATCATCTTTTTAGAGAACACAAAGTAGGGGATTTACCATTTTCCTGTGAAATGTGTGGAAAAAAGTTTACATCACAATCCACACTACATGGTCATAAAAATAGAGTGCATAGTCTAAAAAAGTTTACATGTGAATTTTGTGACAAATCATTTGCTGTACGATCAGAACTTAGAACTCATACTCTGATACATACTGCTGAAAAACCATACGTATGTGAACTATGTGGTAAAGGCTTTAGATTAAGAAACCATTTGAATATTCATGTCACAGCTATGCACACCAAGATACGGGCTTTCAAGTGCACCATGTGTCCCAAGGATTTCAAAAAGAAACGGGATTTAACCGATCATATAAAAGCTCATTTAAATATACGTGACAAAATATGCGAAACTTGTGGCAAAGGGTTTTCAAATATCCATTCGTTAATACGCCATCGTCAAATACATTCGGAGGTCAAAAGATATGCTTGCAAATTATGCGATGCTAGATTTCATCAATTTGTGGGTCTCAATGGTCATATGAAACGAACTCATAATATTGCAAAAAAAaAACCATTAACCCTAAATCAAGTGGATGACAAAACATCTAAATTCATCGATACTTATGCTAAATTTCCAATACTATACGATGGAAAACATCCACTTTATGGTAAATTTGATGATAAACAAAAAGCTTTGATCGATTTTCGCAATACATTACTAAGTCAGCACAACATTGATTTTAAAGGAGAATTTCTAACCGATGCCATAGACCAGTTACAAATGTGGTATTATCTGGTCAAACGTCGTCAAGATAAACCGGATACAAAATTGAATAAAGTGGAAGAGAGTTACTTTAGAAAGTGTGATTTTTTGCCGGCAACAAgattaaaagtaaaaattgtctGTAATATTTGTAACAAACAATTTTATACAGATCACATTTACAAGTGTCATCTTTTTAAAGATCATCAAATAGGAGATTCACCATTTCCTTGTGAGCAATGCGGAAAGAAATTCGTTTCTAAATCGGCTGTGCAATGTCATGTACAAAGAGTacatagtgaaaaaaaatttccatgtgATTTTTGTGGAAAATCATTTGCTGTACCATCCGAACTGAGATTACATACTTTAATTCATACCGCTGAGAAACCTCATGTATGTGAACTATGTGGCAAAGGCTTTAGACTAAGAAACAATTTGGGGCTGCATGTAACGCGTATGCATACCAAAATACGAGCGTTCAAATGTACGATGTGTCCTAAGGATTTTCTTAAGAACGTCGATTTGAAAGATCACATAAAAACGCATCTAAACATACGCGACAAGATATGTGAGACATGTGGCAAGGGATTTACAAATTGTCACTCATTAATACGACATCGTCAAATACATTCAGAAGTTAAAAAATTTGCCTGTAAATTGTGTGATGCTAAATTTCATCAATTTGTGGGTCTGAATGGTCATATGAAACGCACTCATAATATTAAACCATTAACCCTAAATCAAGATAACGATATCACCGTTAATTTTATCAATGCGTATGGTAAATTTCCTATACTTTATGATGGAGAGCATCCACTTTATGGCAAGTATGAAGATAAACAAAACGCTCTGATCGAATTCCGTAATACATTACTGAGTCAGTACAATATCGATTTTAATGGAGCAATTCTAACCGATGCCATAGATCAGTTACATATGTGGTATTATTTTATCAAACGACGTAAACGGGAAACCGGAAAATTAAAtaaagaagaaagaaattatttcaaAATGTGTAAATATTTGCCTGCAGAAAGATTAAAAGCCAAGATCTTGTGTAATATTTGCAACAAACCATTCAATACGGATCACATTTACAAATTACATCTTTTTAAGGATCATCAAGTTGGAGATTCACCATTTCCTTGTGAGCATTGCGGAAAgatgtttttatcaaaatcgacTTTAACCGGGCACGTACAGAGAGCACatagtggaaaaaattttaattgtaactTTTGTGAAAAATCATTTGCTGTACCATCGGACTTAATGAAGCACACTTTAGTGCATACTGCCGAAAAACCTCATGTGTGTGAACAATGTGGCAAAGGATTTCGATTAAGATACAATTTGAATCTTCATGTAACACGTATGCATAACAAGGTACGTGCCTTTAAATGCACAATGTGTCCTAAGGATTTTTTTAAGAATGTCGATTTAAAAGATCACATAAAAACGCATTTAAATATACGAGATAAGATATGTGAAACATGCGGCAAGGGATTTACAAATTGCCACTCATTGATACGTCATCGTCAAATACATTCAGAAGTAAAAAAATTTGCCTGTAAATTGTGTGATGCAAAATTTCATCAATTTGTGGGTCTTAATGGTCATATGAAACGCACTCATAATATTATGAGAACATTTCTTTTAAGGCTCAGTATACATTTAAGACAAAATGAATTGCTTATCAGAAGGCGTTTTGTAAATTCCGCATGTTGTGTTTATACAACCAGCAGTAACCAAAGCAATTCGTTATGCATCAATGTTGACTCTTTGAATTCTAAAAGAACATTTTGTTCGGCCCAGACAGCTATAAAAGCGGACAACGAAAAAGCTCACTGTAATATTGGTACCATTGGTCATGTGGACCATGGCAAGACAACTTTGACAGCAGCCATTACAAAAGTATTATCCAATAAAGGCTTAGCGGATTTTGTGTCTTATGATCAAATAGATAGAGCACCCGAAGAAAAAGCCAGAGGAATAACTATCAATGCCTGCCACATAGGTTATGCTACATCGCAAAGAACCTATGCTCATACAGATTGTCCGGGACATGCTGATTACATCAAGAACATGATTTCTGGAGCCTCACAAATGGATGGTGCCATCCTAGTAGTTGCTGCTACTGACGGCCAAATGCCACAAACTAGAGAACACTTGCTATTGGCCAAACAAGTGGGTATacaaaaaattatagtttttattAATAAAGCCGATTTGGTGGATCAAGAGGTACTCGAATTAGTAGAAATTGAAATGCGtgaaatgttaaccgattttgggTTCGATGGCCTCAACAGTCCCGTTATATGTGGATCAGCTTTATTGGCATTACGTGATGATCCTACGCCGTTTGGTGTGCCTTCCATTGAAAAACTAGTTGATTGCATTGACTCTTATGTACCGACACCGAAGCGTGATATTGACTCGCCATTTATATTGCCTATTGATAATGCCTTCACTGTACCTGGACGAGGTACAGTAGTAGTAGGAACAATAAAACGTGGTACAATTGTTAAAAATGCTGAATGTGATCTTTTGGGTTTTAATCAGAATATTAAAACATCAGTTGGGGATATTCAAATATTTAGAAAAAGCATACCAAAGGTAAATTTAAATAAGAAATGgtaa
Protein Sequence
MIEFQNMIFIQYTIDFKGETLSEAIEQLHTWYYHKNCRKQKSDATLNKDEEIYLKMCKFLPTKRLQVKLVCEICNKNFYADHNYKYHLFREHKVGDLPFSCEMCGKKFTSQSTLHGHKNRVHSLKKFTCEFCDKSFAVRSELRTHTLIHTAEKPYVCELCGKGFRLRNHLNIHVTAMHTKIRAFKCTMCPKDFKKKRDLTDHIKAHLNIRDKICETCGKGFSNIHSLIRHRQIHSEVKRYACKLCDARFHQFVGLNGHMKRTHNIAKKKPLTLNQVDDKTSKFIDTYAKFPILYDGKHPLYGKFDDKQKALIDFRNTLLSQHNIDFKGEFLTDAIDQLQMWYYLVKRRQDKPDTKLNKVEESYFRKCDFLPATRLKVKIVCNICNKQFYTDHIYKCHLFKDHQIGDSPFPCEQCGKKFVSKSAVQCHVQRVHSEKKFPCDFCGKSFAVPSELRLHTLIHTAEKPHVCELCGKGFRLRNNLGLHVTRMHTKIRAFKCTMCPKDFLKNVDLKDHIKTHLNIRDKICETCGKGFTNCHSLIRHRQIHSEVKKFACKLCDAKFHQFVGLNGHMKRTHNIKPLTLNQDNDITVNFINAYGKFPILYDGEHPLYGKYEDKQNALIEFRNTLLSQYNIDFNGAILTDAIDQLHMWYYFIKRRKRETGKLNKEERNYFKMCKYLPAERLKAKILCNICNKPFNTDHIYKLHLFKDHQVGDSPFPCEHCGKMFLSKSTLTGHVQRAHSGKNFNCNFCEKSFAVPSDLMKHTLVHTAEKPHVCEQCGKGFRLRYNLNLHVTRMHNKVRAFKCTMCPKDFFKNVDLKDHIKTHLNIRDKICETCGKGFTNCHSLIRHRQIHSEVKKFACKLCDAKFHQFVGLNGHMKRTHNIMRTFLLRLSIHLRQNELLIRRRFVNSACCVYTTSSNQSNSLCINVDSLNSKRTFCSAQTAIKADNEKAHCNIGTIGHVDHGKTTLTAAITKVLSNKGLADFVSYDQIDRAPEEKARGITINACHIGYATSQRTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMPQTREHLLLAKQVGIQKIIVFINKADLVDQEVLELVEIEMREMLTDFGFDGLNSPVICGSALLALRDDPTPFGVPSIEKLVDCIDSYVPTPKRDIDSPFILPIDNAFTVPGRGTVVVGTIKRGTIVKNAECDLLGFNQNIKTSVGDIQIFRKSIPKVNLNKKW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-