Basic Information

Insect: Pegoplata infirma
Gene Symbol: -
Assembly: GCA_963921195.1
Location: OY992540.1:189198166-189208743[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.012 1 11.3 1.2 1 23 59 81 59 81 0.97

2 16 4.6e-07 3.9e-05 25.2 1.8 1 23 91 113 91 113 0.99

3 16 0.0075 0.64 11.9 0.1 5 23 115 133 115 133 0.94

4 16 3.4e-06 0.00029 22.5 0.0 1 23 139 161 139 161 0.98

5 16 1.7e-05 0.0014 20.3 1.2 1 23 168 190 168 190 0.98

6 16 3.8e-06 0.00032 22.3 1.8 1 23 196 218 196 218 0.98

7 16 0.00019 0.016 16.9 3.3 1 21 224 244 224 246 0.96

8 16 0.48 41 6.2 0.6 1 14 252 265 252 269 0.88

9 16 0.0049 0.42 12.5 3.5 1 23 321 343 321 343 0.98

10 16 4.2e-07 3.5e-05 25.3 0.4 1 23 353 375 353 375 0.98

11 16 4e-05 0.0034 19.1 1.0 1 23 381 403 381 403 0.93

12 16 2.1e-05 0.0018 19.9 0.6 1 23 409 431 409 431 0.96

13 16 0.00012 0.0099 17.6 1.0 1 23 438 460 438 460 0.96

14 16 3e-07 2.5e-05 25.8 1.2 1 23 466 488 466 488 0.98

15 16 2.3e-05 0.0019 19.8 7.6 1 23 494 516 494 516 0.99

16 16 0.012 0.99 11.3 0.5 1 23 522 544 522 544 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.012	1	11.3	1.2	1	23	59	81	59	81	0.97
2	16	4.6e-07	3.9e-05	25.2	1.8	1	23	91	113	91	113	0.99
3	16	0.0075	0.64	11.9	0.1	5	23	115	133	115	133	0.94
4	16	3.4e-06	0.00029	22.5	0.0	1	23	139	161	139	161	0.98
5	16	1.7e-05	0.0014	20.3	1.2	1	23	168	190	168	190	0.98
6	16	3.8e-06	0.00032	22.3	1.8	1	23	196	218	196	218	0.98
7	16	0.00019	0.016	16.9	3.3	1	21	224	244	224	246	0.96
8	16	0.48	41	6.2	0.6	1	14	252	265	252	269	0.88
9	16	0.0049	0.42	12.5	3.5	1	23	321	343	321	343	0.98
10	16	4.2e-07	3.5e-05	25.3	0.4	1	23	353	375	353	375	0.98
11	16	4e-05	0.0034	19.1	1.0	1	23	381	403	381	403	0.93
12	16	2.1e-05	0.0018	19.9	0.6	1	23	409	431	409	431	0.96
13	16	0.00012	0.0099	17.6	1.0	1	23	438	460	438	460	0.96
14	16	3e-07	2.5e-05	25.8	1.2	1	23	466	488	466	488	0.98
15	16	2.3e-05	0.0019	19.8	7.6	1	23	494	516	494	516	0.99
16	16	0.012	0.99	11.3	0.5	1	23	522	544	522	544	0.98

Sequence Information

Coding Sequence: atgggaaattttagTGaatcaaaaaaacataaaaaatcgaaaaatcccAAAAACGAGCTAATCGATGATGAAATACTGAAAGAGTTTTCAAAGGACCTTGACCAATGGAaaccaactaaaaaaaaaaaatcatcgagATCCGCCAGGGGTAGAAATCATGGTACTCAACAACTGTATCCCTGcgataaatgtaacagaaaattaaaAAGCGAATTATCATATAATAAACACCAAGAGCTACACAATGAAAAAGATAAGGAAGGCAGAATATTTAAATGTAATATCTGCAATAAAGtATTTGAAACAAATTATGATTTAAAGGACCATTCTCGTACACATATAGATTGCGGTAAAGGATTTACCACAGCCGGTGGTTTGAAACAACATTCATTTcgacatttaaataaaaatcaatatcCTTGTCCAGATTGTCCCAAATCTTTTCCGACAAAAACAGATCTAGTGGGTCATGCTAACACACataaaaaaatgcccaaaaaataTGTCTGTGATATTTGTGGACGTGGCTTTCAaacccaatttttattgaaacaacACAAAAGATATCACAGTGAAGACAAACGATATGCATGCGAATTTTGCGAAAAACGTTTCGTTACAAAAGACAAATTAAAACGTCATACCCGTATACATACTGGCGAAAAACCATTTAAATGTAAATATTGTGAAAAGGCCTACGTTCAATCAAATGAGTTAATCAAACATTTACGATGTCACTTGGGTGAAAATGTTTATCAGTGTGAATTGTGTCCTCTGAGATTTCCGACGtctaaaaaaactaaaaaatccaCGCCCCGCAAAAAGGAAGAATTCGATGATGATGAATTTGAAACATTTTCGTATGACGATGATATAGAAGACGTTCAAGATAACGAACTTGATGATATCGATGAATTTGAACCAACCACTACAACAAATTCAGCTAGTGCGAATGAAATTTTTGAATGCGAAAAATGCCATCGACAATTAAAATCCCAATTATCTTTAACAAAACACTATGAAATGCACGACAGAAAAGACAAAGAAGAGCCAAAATTTATATGTAGTATTTGTGACCGagCTTTTACACAAGCCTATATGTTAAAGGATCATTTACGTACACATAGTGgtgAAAGACCATTTTTATGTTCAGAATGTGGTAAAGGTTTTACATCATCCGGTAGTTTAAAACAACATTCATACCGACATagtaatgaaaaacaatttcattGTCCCGACTGTCCAAAACAATTTCCTACTAAAACCGATCTGGCTTCACATTATGATATTCATAAAGCAAGGCCTAAAATTCATATATGTGACATTTGTGGACGTGGATTTccgaaaccatttttattaagaaaacacAAAATGTACCATAACAATGTTCGACCATTTCCGTGTGAATATTGTGATAAAcgttttgttacaAATGAAAAGCTGCAACGTCACACTCGTATTCATACTGGTGAAAAACCATACAAATGCCATCATTGTGAAAAAGCCTACTGCCAGTCAAATGAATTAACAAAACATTTGCGTGTTCATTTGGGCGATAGTATATATCAATGCGAATTGTGTCCACTAAGATTTCCAACTGTAAAAAGTGTTCGAGAACATTTTACAACACATAAAAACGATGATGAAGAAACTAAAGCTCGAAATCTGGCACAACTGAATGCTATGGATTTAAAAGGAATTTATTGTAGATAA
Protein Sequence: MGNFSESKKHKKSKNPKNELIDDEILKEFSKDLDQWKPTKKKKSSRSARGRNHGTQQLYPCDKCNRKLKSELSYNKHQELHNEKDKEGRIFKCNICNKVFETNYDLKDHSRTHIDCGKGFTTAGGLKQHSFRHLNKNQYPCPDCPKSFPTKTDLVGHANTHKKMPKKYVCDICGRGFQTQFLLKQHKRYHSEDKRYACEFCEKRFVTKDKLKRHTRIHTGEKPFKCKYCEKAYVQSNELIKHLRCHLGENVYQCELCPLRFPTSKKTKKSTPRKKEEFDDDEFETFSYDDDIEDVQDNELDDIDEFEPTTTTNSASANEIFECEKCHRQLKSQLSLTKHYEMHDRKDKEEPKFICSICDRAFTQAYMLKDHLRTHSGERPFLCSECGKGFTSSGSLKQHSYRHSNEKQFHCPDCPKQFPTKTDLASHYDIHKARPKIHICDICGRGFPKPFLLRKHKMYHNNVRPFPCEYCDKRFVTNEKLQRHTRIHTGEKPYKCHHCEKAYCQSNELTKHLRVHLGDSIYQCELCPLRFPTVKSVREHFTTHKNDDEETKARNLAQLNAMDLKGIYCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -