Pinf041903.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pegoplata infirma
Gene Symbol
ZNF275
Assembly
GCA_963921195.1
Location
OY992540.1:214089579-214093879[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1.9e-05 0.0017 20.1 0.3 1 23 189 211 189 211 0.97
2 17 0.15 13 7.8 0.8 1 23 217 239 217 239 0.96
3 17 3.7e-06 0.00032 22.3 0.9 1 23 249 271 249 271 0.96
4 17 0.00045 0.039 15.8 0.5 1 23 277 299 277 299 0.99
5 17 9.3e-07 8e-05 24.2 2.1 1 23 341 363 341 363 0.98
6 17 6.8e-06 0.00058 21.5 0.3 1 23 483 505 483 505 0.96
7 17 0.056 4.8 9.2 0.5 1 23 511 533 511 533 0.95
8 17 7.3e-06 0.00062 21.4 0.3 1 23 550 572 550 572 0.98
9 17 0.019 1.6 10.7 0.5 1 23 581 604 581 604 0.95
10 17 0.0041 0.35 12.8 4.8 1 23 610 632 610 632 0.98
11 17 0.00032 0.027 16.2 0.4 2 23 639 660 638 660 0.97
12 17 3.9e-08 3.4e-06 28.5 0.7 1 23 666 688 666 688 0.96
13 17 0.0033 0.28 13.0 1.3 1 23 694 716 694 716 0.98
14 17 7.2e-05 0.0061 18.3 1.6 1 23 722 744 722 744 0.96
15 17 6e-05 0.0051 18.5 3.2 1 23 750 772 750 772 0.99
16 17 1.1e-06 9.3e-05 24.0 0.7 1 23 778 800 778 800 0.99
17 17 0.00052 0.044 15.6 0.1 1 23 806 828 806 828 0.96

Sequence Information

Coding Sequence
ATGTCTgaagatttattaaaaaagtgcCGCACTTGTTTAAGTGATTCGCATATATTTCATCAACTCTTCGATTATGTGgatgaaaattataaaattctggAAATGTTAGATGGCATAGTGCCACAAATAGATATAAAGGCTACTACAAAGTTTTCCAGCAATGTGTGTCAATCGTGCGTCGATAAACTGTTGATCGGTTATAAATTTCAACAATTGTGCATAGAAACCAATAGTCGTCTCTTTGATTTGATGGGCATAGTTGAATTTGAGACTGCACCTAAATTGGAGGAGGAAAATATACTAGATCCTTTGACGGGAGAGGCTAGTTTTAAAATGAAGCAAGAAATTGAAGATGAAGCATGTTTTGAATGTGAAATAAATCCCGAAGAAATTGAGGTGGCATTGGGATCCGCCAGCGATAATGATTGGGGAAATGATACGGAGGATAATGATACAGATTCTagCAATGAAAAACTTTCAgttttaaaagaaagaaaatcaaaaaaatcccCCACAAAACCTGAATTGCAAAAACCTTACAAAAATTCTCTACGTAAAGGTCCATTCCCTTGTTCTGAATGTGATAAAGTTTTTGATCGTGTATTTAGTCTTAAACGCCATGTTTCCGTACATTCGAAACTACGAGCTTATCGTTGCGATATTTGCAAGTATAGTTCTTCAGCAGAAAAACCTTATAATGCCCACATGCATGCACATGAAACtggaaaaattaaaacaacaaaattcacTTGTTCTGAATGTGGTAAAGTTTTTAATCGTTTATTTAGTCTTAACCGCCATGTTTCCTTACATTCGAATGTACTACCTTATCGTTGCGGCATTTGCAAGTATAGTTTTGCTGCAGAAAAATCTTATAATGACCATATGCTTACACATGATAATGGAGAAGATCTTGAgacaaaaatagaaaataaaaacaaaagtaaTGAAACGAACGATTTCAACAATGGTAATACTGATCTAAAAGATGAAAATGACATTGGCAAGGAAATACAATTATTTCAGTGTCCTGATTGccctaaatgctttgaaaaaaagTCATCGTTATCGGCCCACTATAAAGTTCatacgaaaaaaactaaaaaaaagactAATAAGGACCCAAATAATGAAGAGTTTATAGATGAAGTTGCAAAATCAACAGAGGAGATTAATGAAAAAACTGTGGAAGCGTATATAGAGGAAGTACCTAAAGTAATTGTAAAAGAGGAAATAGAAGTAACACCACAAATTTTTGAAGAACCAATGGAtgatttaaatgcaaatgcagaaTGGTTTGATAACGACTATGAGGATTCAGAtgataattctgaaaaaaatatttttgcaaagccTGGAGCCAAGCATACTAAAAATCTTGACTTTATTGATACCGGTATAGGAGAAATAGAAAAacCTAATAGTAGTAATAAAAGAAGTGGTAGTTTTCCTTGCGAAATTTGTGGAAAAGTTTTTGACCGTCCATATCGTTTGAAACGTCACAGTTCTGTACATTCCATTACAAGACCGCATGAATGTGAAATTTGTAAATATCGTTTTGCTacagtaaatattttaaaagcgCATTTAATACAACATGAAGGAGAAGGTAGTGGCATATTAGTGTCACAATCACGACCGGAGGGCTTTAAGTGTCCCGATTGTCCAAGGCGTTTTGAAAAACAGGCCTCTTTGTCGGCTCATCGTCAAATACATACTCGCAATGCTGCAGAAACTAATTATCCTTGCATGGTGTGTAATCGAAACTTTATGTCGGTTAGATCTTTAACTGAACACATAACAAATAAACATCCGGAAGTCGAAAAACACAAATGTGATCAGTGTGAAAAAACATTTGTCTTACATGCTCATTTGGTAGAACATTTAAATAGACATAAAggcaataaaaatctggtatgtttaaTATGTGAAAAAGAATTTGGTTATACGAATACTTTAAAAGAACACATGCGCACGCATAGCGGAGAAAGTCCCTATTTATGTCCTCAGTGTGGTAAAACATTTCGAAGTGCTAGCAATTTACGTCAACATATGGAACGGCATACGGGTTTGAAGAAATATCAGTGCCCTGAATGCCCCAGCCGTTTCAATTGTCGTTCAGATTTAATAAAACATGCTTCAACCCATACTAATGCTAAGCCACATGTATGTGATATATGTGGTTCACGTTTTACACGAGCATATTCATTACAAAAACACAAGTTGTTACACTCTGGAGAAAGGCCTTTTAAATGTGATCAATGTAGTATGACATTTGCTATTATTTACCATTTACGACGTCACATGCGTACCCATACGGGAGAGAAACCATATAAATGCAAGTACTGTGACCGTGCCTATGCCGAAAGTGGAGATTTAACCAAGCATTTACGGACTCATGTAGGTGAAAACACCTATATGTGTGATCAGTGTCCTGTTGCTTTCAAATATCAAGCTGAATTAAGGCAACATGTATCGGAACATTATAAAATGTCACAAAAACTTATGCAACAAGCACAAAAGATGTCCGAAGATGCACAACAACACGAAATAGCTGAACAAACTCAACAtcatcagcaacaacaacaattgcCCGTACAAGATCATAACCACCATTTAATTGCGGAGCAAGCTCAACATTTGACAATAGGGATTGCAAGTCATCATCAAATGCAATTAGTAGATCATAATCAACAATTACCGACAATAGTTGAACAAGCACAGCAACATTCACAAATTGATGAAACAACTAGACGAGACAACTTAGATTTAAAGAATCTCACATCttaa
Protein Sequence
MSEDLLKKCRTCLSDSHIFHQLFDYVDENYKILEMLDGIVPQIDIKATTKFSSNVCQSCVDKLLIGYKFQQLCIETNSRLFDLMGIVEFETAPKLEEENILDPLTGEASFKMKQEIEDEACFECEINPEEIEVALGSASDNDWGNDTEDNDTDSSNEKLSVLKERKSKKSPTKPELQKPYKNSLRKGPFPCSECDKVFDRVFSLKRHVSVHSKLRAYRCDICKYSSSAEKPYNAHMHAHETGKIKTTKFTCSECGKVFNRLFSLNRHVSLHSNVLPYRCGICKYSFAAEKSYNDHMLTHDNGEDLETKIENKNKSNETNDFNNGNTDLKDENDIGKEIQLFQCPDCPKCFEKKSSLSAHYKVHTKKTKKKTNKDPNNEEFIDEVAKSTEEINEKTVEAYIEEVPKVIVKEEIEVTPQIFEEPMDDLNANAEWFDNDYEDSDDNSEKNIFAKPGAKHTKNLDFIDTGIGEIEKPNSSNKRSGSFPCEICGKVFDRPYRLKRHSSVHSITRPHECEICKYRFATVNILKAHLIQHEGEGSGILVSQSRPEGFKCPDCPRRFEKQASLSAHRQIHTRNAAETNYPCMVCNRNFMSVRSLTEHITNKHPEVEKHKCDQCEKTFVLHAHLVEHLNRHKGNKNLVCLICEKEFGYTNTLKEHMRTHSGESPYLCPQCGKTFRSASNLRQHMERHTGLKKYQCPECPSRFNCRSDLIKHASTHTNAKPHVCDICGSRFTRAYSLQKHKLLHSGERPFKCDQCSMTFAIIYHLRRHMRTHTGEKPYKCKYCDRAYAESGDLTKHLRTHVGENTYMCDQCPVAFKYQAELRQHVSEHYKMSQKLMQQAQKMSEDAQQHEIAEQTQHHQQQQQLPVQDHNHHLIAEQAQHLTIGIASHHQMQLVDHNQQLPTIVEQAQQHSQIDETTRRDNLDLKNLTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-