Pinf026250.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- bab1
- Assembly
- GCA_963921195.1
- Location
- OY992538.1:177617367-177621068[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-11 3e-08 34.6 0.0 4 45 434 475 431 475 0.91 2 2 5.1 1.3e+04 -2.7 0.9 4 20 572 587 572 587 0.86
Sequence Information
- Coding Sequence
- ATGGGTGGCCCACCAGCTGCTACATCCTCAAACGGTCCTGTCGAAGGTCAAACATATTGTTTGAGATGGAACAATCACAAATCAAATTTAGTAGAGATATTGAATGCTCTCATCAAAGTAGAAAGTTATGTGGATTGTACAATCGTCGTAGATGATCAAGTGTCCTTTAAAGCTCACCGTGTGATATTGGCTGCCAATTCACcatattttcaatcaattttacaAGATCTTCCCATGGATCATTGCAGTATTATATTTCCGGGTGTTAAGGCATTTGAAATGAGAGCTTTATTGGAATACATGTATACCGGGGAAGTTAATGTTACACAAAGTCAGATACCTAAAATAATGCGTATTGCTGAGGAGTTAGAGGTTAAGGGTTTATTCGATATGGCTGATTTAAGAGAAAAGTTCCATAAATTAAGTGAAGAACATGCTGAAAGATCAGCTAGTAATCCTTATGCCAACACCTCAGCTCCATTAAATCCTTATTCCTCAGTTACCACTACTACCTCaccagcagcagcagcagtagcGGCTGCTGCAGTCAATACATCGACAAAAAATAGTTGTAAGGATAATGAAAACTATCGCAATAATTCCTCCTCAGTGATCTCTACTTCATCAAATATTTCACCTTCCGCTGCACCTTCCAGTAGCTCATCACCACCCTATAGTAATTATAAATCACCCTATTCCAGTTTATATGCAAAGTCACCGGGTCCCAATACAAATCAGAATACTTCAAACAATCCCCAGTCTACACAACAACAAACACCCACACATCATACTACGGTTCCTGAACGTTCTGCTGCCGCCTCAGCTGCTCAATGGCCTTTATCACCTTCAGCTGCGGCCGCTGCTGCTATGTTAAGTTCCGTGTATGAGTCGGCTCCAGATATGAATCCTTTGAAACGCAAAAAACTCTCATCAATGTCAAGTATGCTTATGAATCGTGATACTCCTATATTGCGTAATGTCTTAGCTCAAGCCAATCCAGCAGATTCATCACAACAATTGCCACTTTTAATGCCTAATGCCGGCAATGTTAAAGCGGAAAAATCTTCATCATCAAGTAATTTAGATAAAACTTTAGGAGCTCTAAGTAATAATCATAGTTTTAATGGATCAGATTATAGTAGCGGTGATAAGAAATATCAAGATGAGCCTCATTCTCCCTTTACTGATCGTTCTTTTGAAGATGATGGTTTTGATGCCAAAGGTAATTTCACAGGCAACTTCGCTAACAATCCCAATCAAAAACCCGAATGGAAACGTTATAAACAATATACCCGCAGTGATATCATGTCGGCCATACAATGTGTACGCGAAGGTATGAGTGCCCTGCAAGCATCACGTAAATTTGGTGTGCCCTCTCGTACACTCTACGACAAAGTTAAAAAGTTGGGTATAACTACTGGCCGTCCTATGAACCGCACCATGAAACGCAGTCCCAGCAGTGTAGAATCACCAGCCGCATTCCCCTATTCCCATGGTTATGGCCAAGCTTCGGCGGCAGCTGCCGCTATGCATGAAGCTGCCGTACGTGAAGAACGTGAATTAAAAGAACATCATAGAAATTCCGAACATCATCATATGCCACCTACTATACCTCATCCGGCAGCAGCCTTATTAGATCATGCTTTTCTACAGCAGGCATTGGAAAATCGTGGTGGTGGGGATATAGCCGGCCGTGAAGCATTACATGCTATGGCCTTGGCAGCGGCTGCCCATGCGGCTGCTAATCGCATGTCTACTAGCCCCGGTCCTAATGGTAATGCTGTACGTTCTCCTAGTCCTACGAATTTTGCACTGAAATATGGTAATTTACGTAATGCCGAACAAGAACTAATGGAGCGTCATGAATTGGAACGTGAGCGAGAACGTGAATATATTGAAAGGGAAAGAGAACGTGAAAGAGAATTGGAACACGAACATGAACATATTGATGACGAAGATGATCACGTAGAAGATTTATCGGTGGCCCGCAAAGATATGCATTCTCCTATAATGGCTAGAGAACGGCCAGAATCTCCCTACTCACCTGAGGTGCAACAACATAATGAAAATGAAAAATCTGTTATAATGACTACAAAATTACCCAGCAACAATACAAATGATGATGCTTTCATACATGAATCCAACATGAAACGTGAGTTGGTAATAGATGATAATAGAGCTGACTGA
- Protein Sequence
- MGGPPAATSSNGPVEGQTYCLRWNNHKSNLVEILNALIKVESYVDCTIVVDDQVSFKAHRVILAANSPYFQSILQDLPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLREKFHKLSEEHAERSASNPYANTSAPLNPYSSVTTTTSPAAAAVAAAAVNTSTKNSCKDNENYRNNSSSVISTSSNISPSAAPSSSSSPPYSNYKSPYSSLYAKSPGPNTNQNTSNNPQSTQQQTPTHHTTVPERSAAASAAQWPLSPSAAAAAAMLSSVYESAPDMNPLKRKKLSSMSSMLMNRDTPILRNVLAQANPADSSQQLPLLMPNAGNVKAEKSSSSSNLDKTLGALSNNHSFNGSDYSSGDKKYQDEPHSPFTDRSFEDDGFDAKGNFTGNFANNPNQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSSVESPAAFPYSHGYGQASAAAAAMHEAAVREERELKEHHRNSEHHHMPPTIPHPAAALLDHAFLQQALENRGGGDIAGREALHAMALAAAAHAAANRMSTSPGPNGNAVRSPSPTNFALKYGNLRNAEQELMERHELEREREREYIERERERERELEHEHEHIDDEDDHVEDLSVARKDMHSPIMARERPESPYSPEVQQHNENEKSVIMTTKLPSNNTNDDAFIHESNMKRELVIDDNRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00258994;
- 90% Identity
- iTF_01165629;
- 80% Identity
- iTF_01165629;