Pinf029495.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- -
- Assembly
- GCA_963921195.1
- Location
- OY992539.1:45367096-45371128[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-07 0.00057 20.9 0.0 8 39 405 436 401 440 0.87 2 4 3e-14 7.9e-11 42.8 0.0 5 44 456 495 453 496 0.93 3 4 0.022 58 4.9 0.0 27 37 525 535 521 541 0.89 4 4 8.3e-16 2.2e-12 47.8 0.0 4 41 564 601 564 603 0.92
Sequence Information
- Coding Sequence
- ATGAATCATTTAAAATGGATGGGCCATTCGGCCACCATATTGGATATACATAAAAATCTACGAGCAGATTTAAAAAGTTGTGAAGTTACTCTAGTAGCTAAGGGCCATTGTGTTAAAGCCCATCGCTTCGTTTTGTCGTCATGCAGTGACTTACTACGGGGTCTCTTATCGGATATCCCCATTGGCCAGGAGTGTTGTGTAATGGTACCCGATATAAAGGGCCATCTATTGGATAATGTATTGGGGTTTATATATCTGGGCGAATGTTCTTTATCTTCAACAAATTTATCAGAGTTTTTAGAGGCCATTAATATATTGGGCATAAAAAGTGCCATAAGTTTTGAATGTAATACAAATGCTTTGCAGGCGACACAAAATACGAATACGAGTACTAGTGCTGAAATTGGTGGTAGTGATTGCATTTCTAATGTGGTTGGTAGTAATGTTGGTACTACTACGCCAGCTAGACAAGAACAATCCGAAACTACCAGTGAAAGTGCCACAGTTTCTTTACAGCAAGATGAATTAATGGAAACACAGAATATAATGCATGCCGATGCCCAGGCATCAAATTCATCCATCGCCAACTCATCTGGAGGCAACCGTGAACTAGATTTTTTGGATGTTTACAATGAACCTCAACATAAAATCACTTATTCTATAGAACATGTTGCTGGATCTGGTGCTGGTAATGaatttattttaacagaaaactctggaACGTTTACTTTGACCCAAAATACAAAATTGGAAGCAACGTCTCGTGCAGAATCGACAAGCATGGAAGTAAACGAAGATGATGGATGTGATTCTCACATAATTGAAGAATATAGTAGTGGAGATGAACGTCTAATTCAATTAAGTGAAACAGAAACGGAACCAGCTGTATCGGAAGACCAAAATCACACATCGCTAGAACCAGCAATAATACAAACTCCTATCGCATCGACATCATCAACATCAATTATACAATTTAAACCTAAAATTAAACATATTCGAATAAAACCTCCACTAACTTCAACTCCAATCCAAACAAAAGTTGAACATTCCTCTATTAATAGCTCTATGCATAGTTCCACCACACCAGATGATCCTATATCTATAATACAAAATGATAATGGTTTTACTTTGCTGAAAGAGGAACCTATGATGAGGGTTCaggattcaaaaattttttttacgaataCATCAGATATATCTGCAGCGGATTTAGCATATCAAGCTATGGTTAATGAAGGTTTGTCCCTACCAAAGGCAGCAGTAAGATTTAATGTATCAAAAACAGAATTATGGCGTCGAGTTCGCAGTACAGGTGTAGAAAATCTACACAAGTCTGCTAAATTAGATCCCGAGAAAATCGATGTTATTGAATTGGCTTCTCAAGCGGTAATTAACGAAGGCTTATCACTTCAAAAGGCCGCCATACGCTATGATATTTCCAAGACGGTACTCTGGCGTAGGGTGCGCAAACATCCGCAATATATGAAGGTAGCACGCGAAAATCCTATTATAAATAAGGCCTATGAACGTTTAAAGACGGGAGAATCTTTAAAAAGTATATCACAAGATTTAGATATACCCATGTCTACGTTGCATCGTCATAAGGTTCGCCTCTCACAATCTGGTCAATTACCCGAATTTGTTACTTGTAAAAAACGGGATAGCATGTCCAAGGatgatttaaaattaaaacttgCCAAGGCTGTGCATGCCTGTGTTCACGAGGGTATGTCACAAAATCATGCTGCTAACttatttgaaatttccaaaagtaCTTTATGGCGTCATTTACAAAAACGTGTAGCCGAAGCCGAGGAGGCCGAAACAGAAGCAGCTGATCAAATAGAGTCTATGGGCGAGGAATATGTTATTAAACAGGAAGTTATATTATCCTAA
- Protein Sequence
- MNHLKWMGHSATILDIHKNLRADLKSCEVTLVAKGHCVKAHRFVLSSCSDLLRGLLSDIPIGQECCVMVPDIKGHLLDNVLGFIYLGECSLSSTNLSEFLEAINILGIKSAISFECNTNALQATQNTNTSTSAEIGGSDCISNVVGSNVGTTTPARQEQSETTSESATVSLQQDELMETQNIMHADAQASNSSIANSSGGNRELDFLDVYNEPQHKITYSIEHVAGSGAGNEFILTENSGTFTLTQNTKLEATSRAESTSMEVNEDDGCDSHIIEEYSSGDERLIQLSETETEPAVSEDQNHTSLEPAIIQTPIASTSSTSIIQFKPKIKHIRIKPPLTSTPIQTKVEHSSINSSMHSSTTPDDPISIIQNDNGFTLLKEEPMMRVQDSKIFFTNTSDISAADLAYQAMVNEGLSLPKAAVRFNVSKTELWRRVRSTGVENLHKSAKLDPEKIDVIELASQAVINEGLSLQKAAIRYDISKTVLWRRVRKHPQYMKVARENPIINKAYERLKTGESLKSISQDLDIPMSTLHRHKVRLSQSGQLPEFVTCKKRDSMSKDDLKLKLAKAVHACVHEGMSQNHAANLFEISKSTLWRHLQKRVAEAEEAETEAADQIESMGEEYVIKQEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01165660;
- 90% Identity
- iTF_01165660;
- 80% Identity
- iTF_01165660;