Pinf024780.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- retn
- Assembly
- GCA_963921195.1
- Location
- OY992538.1:142983737-143033352[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.1e-17 4.8e-13 50.7 0.1 29 89 4 62 1 62 0.93 2 2 1.9 1.3e+04 -2.0 0.2 13 13 210 210 172 249 0.61
Sequence Information
- Coding Sequence
- ATGGCTAAATCCGTATTAGATCTTTACGAACTGTATAATTTAGTTATTGCCCGAGGAGGGCTTGTGGATGTTATAAACAAAAAGTTATGGCAAGAAATCATAAAGGGATTGCATCTACCATCTAGCATAACAAGTGCAGCATTTACACTAAGAACACAGTACATGAAATATTTGTATCCTTATGAATGCGAAAAAAAGAATCTAAGTACGCCTGCTGAGTTGCAGGCCGCAATAGATGGTAATCGTCGTGAAGGTCGTCGTTCCAGTTATGGACAGTACGAAGCCATGCACAATCAAATGCAAATGCCTCAAATGGCTCGTCAATCCCTACCAGGCGGTATGCAACAAATGTCACCGTTGGCTCTGGTGACACATGCTGCTAATAATCAACAAGCACAGGCTGCAGCAGCTGCGGCTGCAGCACATCACAGACTGATGGCACCTTCATTTGGTCAAGTGCCAAATTTAGTAACCCAAGAAATTGAACAACGTATGATTGAATATTTGAAATTGATACAAGTGAAAAAGGAACAGAATGCCATGACAAATGGATCAGCTGCAATGGGACTATCACCGCATCACCAacatcagcagcagcagcaacagcaacaacagcagcagcagcaacaccaGCAGCAACAGCTTCAGCAACAACGTCAGAGATCACAAAGTCCTGAAATAACTACAAGGGAGGCTTTGAATGCTTTAGAAATGTCACGTGTGGCATTGTGGCAAATGTACCATAATAATACCAGCCCACCAGCATCGGTTAATACTTCACCACAAGGTGGTGGCAGCGCAAACAGTGGTGCTGTTGTTAATGAAGCACAACGCAGCGAAGCCTTGAACCTTTCAGATTCACCACCAAATCTCACCGCAATAAAGCGAGAACGTGAACGCGAACCCAGCCCTGAAATAAATGAACGTGATGAATTCCACCACCAACCACCACCGGCAAAACGTGCCGGATTTCCTGCTAGTTTTTATTTGCCACCCGGTATGAGTGGCATGGCTGCTGCTGCAGCTGCTGCCAATTTCCACTACAAAGGAGGCCATCACGATTCGGACGGTGAAGCCGACGAAGAAATTGATGACGACGGTGACCACAATACGACCGCAAATTCTTCACATGATGACCACAATGAAAGTCAACAAATAAATGGTGCCAGCTCGGTCCGACCTCCACGACATCACGGCAGCAATAGTAGTGTTCACAATGATAAGTCTGATGATTCGGCCATTGAAAATTCACCATCCACCTCAGCAGCATCAGCTGGCAATGGTCAAATTTCCCCCGTGTCCACCAAAAAAATACACTTATCAAAACAGACACAGCAACACAACACATCGAATTTAATCGGCGGCGGTTGTGCTGATAGTAACAATATGACGACGGGCAATGCATCCTTAAACCCTTTCGAAGCGTTAAATCTGCTATCGGGATTGCAATTTCGTGTTACCCGAAACGGTATTAATGCAAATGGTGAACAACAGTTACAGGTTAACCTTGAATTGAATGGCATGAAATACTCTGGCATACTTATAGCAAGTACAGCAAATCTAACTCCAACAACACCAACAATGATGATGACAACGGCTACGACATCGTTAATCGATGAAAGCAGTAGCAGCATCAACAATTCTAACAATACAGAAAGCAACAactgcagcagcagcagcagcagaaaGACTGGCAACATTATTAGTCCCcataataataatattattaatAATAGTAATGAAACAAGCAAGGATTTAGTCGTTGCCATGGATGCAATGGAAGACACAAATGAACTGACAGTGCGTGATACTGAAACACCACCAAAGAAGACGACGTCGACGACAACGAAACAAACAAATGCCGTTATGGCAAACAGTTCCAATACATCAACATCAACATTCAAGGATGCTCCagtaacatcatcatcatcatag
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMQMPQMARQSLPGGMQQMSPLALVTHAANNQQAQAAAAAAAAHHRLMAPSFGQVPNLVTQEIEQRMIEYLKLIQVKKEQNAMTNGSAAMGLSPHHQHQQQQQQQQQQQQQHQQQQLQQQRQRSQSPEITTREALNALEMSRVALWQMYHNNTSPPASVNTSPQGGGSANSGAVVNEAQRSEALNLSDSPPNLTAIKREREREPSPEINERDEFHHQPPPAKRAGFPASFYLPPGMSGMAAAAAAANFHYKGGHHDSDGEADEEIDDDGDHNTTANSSHDDHNESQQINGASSVRPPRHHGSNSSVHNDKSDDSAIENSPSTSAASAGNGQISPVSTKKIHLSKQTQQHNTSNLIGGGCADSNNMTTGNASLNPFEALNLLSGLQFRVTRNGINANGEQQLQVNLELNGMKYSGILIASTANLTPTTPTMMMTTATTSLIDESSSSINNSNNTESNNCSSSSSRKTGNIISPHNNNIINNSNETSKDLVVAMDAMEDTNELTVRDTETPPKKTTSTTTKQTNAVMANSSNTSTSTFKDAPVTSSSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01260775;
- 90% Identity
- -
- 80% Identity
- -