Phum005051.1
Basic Information
- Insect
- Pediculus humanus
- Gene Symbol
- GATA1_1
- Assembly
- GCA_000006295.1
- Location
- NW:2339-5673[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 1.1e+04 -6.1 3.4 20 26 12 18 10 18 0.78 2 2 4.9e-15 8.8e-12 43.7 6.8 1 35 544 577 544 578 0.98
Sequence Information
- Coding Sequence
- atgagTAATGTTCCGCCGAAATTTTACGAGTTATGTAGGCTGTGTTTGTCATGCGACGGGGTTAAGCTATCATTATTCGGTGAAGAAGCCATTTCCCgcaaatttctatttaaaattatgactTGTCTTTCAATAATGGTAAGAgaaataactttaaattttatggttGGGTTTGAATCCAGTCTGTCAGTCAGAATTGCTGTTTATTCTACtttaattcataaagtttcaaAAAGTGATTCTCTACCACCATCTATATGTCATCGCTGTGTCTACAAATTAGATGTTTTACATGATTTTCGTGAAGTTTCAAGAAAATCAGAAGTTATATTAAAGCAATATTTGGGATATATGGACCAACTGAAAAATGGGAAAGCTAATCCTGAAAATGTATGCGAATTACCAACGACCAAGGATTTAGTTACAGTTTTGCCAGAAACAGGAGAAGATAATTGCTTGAGTCAGGAACCTTTAAAAgaagaatcggaaaaaaattttgaaacaataaataaaaatcttttcgaagaagaagataaGGATACGATAACATTAAATTCAATATTAGAGCCtacaaaacttaaaaaaaaatcattagtttctattttggaaaattcaaataatgttGGTAAAATCACAAAGTCTGATAATTTGGAATCTGATGTtgttaaagaaattaaaattgaaagtgATAAGGAAgaagttaaaattaatgataaaagtaaAGAGTTATCAAAAGACGATTCCAGTTTAAAAATACTTGAAAAATGCCTACTTAACGGTAGCAATGGTGTGTACAAAAGTAGCAATAATGAGCCATCCAAATATTCACagaatgaagaaaataaaacaaatgaatcTGATATAGGGTTGAGTAATGAAATAAATGCTTTAGAAAAAGAAGTCAAGCAAGAAATAATCAAAGACATTTATGAGAACGGTTTGATAGATACGAATTTGTATAATACAAGGAGAAACACCGTGACGATTGTACTGAACGAAAGCAAATGCAAAGTTGAAAATGAGAGTAATGATATAGAcattaagaaagaaaataatttgtacGAAAATGAAGATAGTTCTGAAGATGAAGGTCAGTTAGTAATTGCCGACGAGGGTATCGATGCGGAAGGAGATAAAAAGAACACGGTGGTAAGAGTCACTCCAGAAGGAAAGTATTATGAATTTGGTAACCGGATTTATGGTGAACGAGAAAGAGAAGCAGCTGAAGTATTGCAAGCAATAAATAGTCAATACTTGGGACCGCCAAAAGGAGAAGCTAGtaatttattaagaaaattaattttttgtaaaaacaataGAACTGAAAATTCCGTTTTGAACAATTgtacaaattttcaaaagaatgacgaaattaaaaatgggtcgactatatataataaaaggaaaaggagtTACCCGGTGAAAACTGTACAGGAAATAAATGGAAAGGTTCCAACAAATTATGATGAAATTGCTGGAGAAGACGATGAAATCGGAGAGGAAATTCATATCCCGGAATTTGGTATTCCTTCAACGGAAAGTTCTCATCCTTTTCCCCGCATCGATTTTCctaatttaataaagaaagcTAAAGACTCGAAATCGGATATAAAGCGAACGGATTTGAGCTGTACAAATTGTGGCACTTGCACGACAACCATTTGGAGAAGAAATGCATTGGGAGAAATGGTCTGTAATGCTTGtggattatattttaaattgcacGGAGTAAACAGACCGATGAATATGAGAAGAGATACGATACATACGAGACGTCGACGGGCTAAGGGTGAAAAACCAAGCAGGAGAAGGTCATCGGCGAATTCTATCACAAATGGGGACGGCCCTGACGAAATGCTAGCAGCATTAAGGAGACAAATCAGTCCTCAGCTTTTATTGGCAAGTTTACAGCATACGAATCAAGTACCTCAGCAGACTCATTCAAATTCagTGACGACGGTAAATCCGCCTGGACCTCCAGCTTCATACAGCGCGCATATTCAAACAGCAGAAGCATCGGATGGCGATGAGGATGACATGGACATGAGTGAACTTCCCCTTAATCTTGTTTCGACGTCTTtggatgacgacgacgagtcTTAG
- Protein Sequence
- MSNVPPKFYELCRLCLSCDGVKLSLFGEEAISRKFLFKIMTCLSIMVREITLNFMVGFESSLSVRIAVYSTLIHKVSKSDSLPPSICHRCVYKLDVLHDFREVSRKSEVILKQYLGYMDQLKNGKANPENVCELPTTKDLVTVLPETGEDNCLSQEPLKEESEKNFETINKNLFEEEDKDTITLNSILEPTKLKKKSLVSILENSNNVGKITKSDNLESDVVKEIKIESDKEEVKINDKSKELSKDDSSLKILEKCLLNGSNGVYKSSNNEPSKYSQNEENKTNESDIGLSNEINALEKEVKQEIIKDIYENGLIDTNLYNTRRNTVTIVLNESKCKVENESNDIDIKKENNLYENEDSSEDEGQLVIADEGIDAEGDKKNTVVRVTPEGKYYEFGNRIYGEREREAAEVLQAINSQYLGPPKGEASNLLRKLIFCKNNRTENSVLNNCTNFQKNDEIKNGSTIYNKRKRSYPVKTVQEINGKVPTNYDEIAGEDDEIGEEIHIPEFGIPSTESSHPFPRIDFPNLIKKAKDSKSDIKRTDLSCTNCGTCTTTIWRRNALGEMVCNACGLYFKLHGVNRPMNMRRDTIHTRRRRAKGEKPSRRRSSANSITNGDGPDEMLAALRRQISPQLLLASLQHTNQVPQQTHSNSVTTVNPPGPPASYSAHIQTAEASDGDEDDMDMSELPLNLVSTSLDDDDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -