Phum002796.1
Basic Information
- Insect
- Pediculus humanus
- Gene Symbol
- gata4
- Assembly
- GCA_000006295.1
- Location
- NW:256841-261267[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-18 8.7e-15 53.3 4.1 1 34 156 188 156 190 0.97 2 2 7.9e-19 1.4e-15 55.8 4.6 1 35 210 243 210 244 0.98
Sequence Information
- Coding Sequence
- atgttgggaaaactttttttgccATATTTGCTCACAGATTTAttacttgCCGCCATGTaccaatcaaaaaattataattacttaACAAACACTTCATCACACGTTGCTGATTTGTCAGCAGCAACGGGTCAAACCTGGCAGGGTGTCGAATCAGATTGTAATAAGACATCATTGCCAGCATTTTCGAAAAGATTTTCAACAACGAATCGTCTTCATTCGTATGCAATACATAGAAATTATCCGGCAACAAGTTCCGGTTATTTAACATGTCCAACGGAAAACTCTTCGTCTTCATCTTCCTCATTATGGTACGAACCCACCACCAATAATTTACCACATTACAGTTTAATTGGGGAGACTACGGGAGGACCATCGTCGAGAGCGAGACCTCCAAGTACTTTACCATCAACAATATCAGCTTCCGCTTCTTTGTCGGCCTtCGTCGATTATTCAGAGGGAAGGGAATGTGTTAATTGTGGAACGGTGTCAACGCCACTTTGGCGGCGAGACGGAACGGGCCACTATTTATGCAATGCATGCGGGCTGTACCATAAAATGAACGGAATGAATAGGCCGCTGGTCAAACAACCGAAGCGGCTGactaataataaaagattagGACTCCAATGTTCGAATTGTAACACGGCAACAACATCATTATGGAGAAGAAATTCATTAGGTGAACCCGTTTGTAATGCTTGCGGTCTCTATTATAAACTTCACGGGGTCAATAGGCCACTGGCAATGAAAAAAGACAGCATACaaactagaaaaagaaaaccaaaagGTTCATCGAAAAGTGAAGCATTAGGAAACGTTGCTAGTCCGGTATCTCACTCTTCGGGTCTTGGAattggaggaggaggaggaccaACAGCAAAACGAATCAAACTCGAACAAAACGATAATCGAACCggtagtcatcatcatcatcatcatcaacatggTAATTCTCTTGTATCGAATCCTCTTGCACCATACTCAACATTGTACTCACAATGCGGTTCTCACGAAGCTCAATCACGCGTATTCGTATCTCCATATCACACTCAGATCTCTCATTCGGCTTATTATGATTTTCCGCAAGGTTCACCCGTCGAAACGGAAACTTTAACAAGTAAAATTGATGAATCGACCGGAAATAATTCTTGTAGTTCGTCTTCCTCTCCTAAAATGGTAGCCGCACAAGATCCATCATCGTCGCAAGTCGAAAGAACAACAACCACTTAG
- Protein Sequence
- MLGKLFLPYLLTDLLLAAMYQSKNYNYLTNTSSHVADLSAATGQTWQGVESDCNKTSLPAFSKRFSTTNRLHSYAIHRNYPATSSGYLTCPTENSSSSSSSLWYEPTTNNLPHYSLIGETTGGPSSRARPPSTLPSTISASASLSAFVDYSEGRECVNCGTVSTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPKRLTNNKRLGLQCSNCNTATTSLWRRNSLGEPVCNACGLYYKLHGVNRPLAMKKDSIQTRKRKPKGSSKSEALGNVASPVSHSSGLGIGGGGGPTAKRIKLEQNDNRTGSHHHHHHQHGNSLVSNPLAPYSTLYSQCGSHEAQSRVFVSPYHTQISHSAYYDFPQGSPVETETLTSKIDESTGNNSCSSSSSPKMVAAQDPSSSQVERTTTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -