Phum002236.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pediculus humanus
Gene Symbol
SMARCC2
Assembly
GCA_000006295.1
Location
NW:1786335-1793955[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-14 6.6e-12 44.6 0.1 3 44 1112 1153 1110 1155 0.95

Sequence Information

Coding Sequence
atgagtgaaaataatgtaaaaacgtCAGATATCGCCGACACGGTTGTTCGTCAACAATCAGATATGTATAAAGTCGATTTGAACAATTTGAACCTAtcggaaaattatgaaataaatcaaatattttccGGTAACAACGTAACAGTTTACGCACTTTTAGAATCATCAGATGAAATAAATggCTCTGACGTTATGGAAAATGATAACGAAAACGTTGGAAAAGATatgaaagttttattttttaaagatccgacgaataaaattaataattgcgACGTGGAAATGTCGAATTCGTCGAAAGGCGTCAACACGGATATAGCACTGAGTCCGAAACTTATTGAAAAAGTACAAAACGTTTTAAGTTTGAACATATTATCGAGTTCTTCATCGAAAATCCCAGGTTCTACGGATTCCGAACCTATAACGAGCGTGTCGAGTATTAATTCCGCCTTGTACGATACAAAAGACGTGTCAAACGTTTTACTAGTGCCACTTTTCATGATGAacgaaaaaccgttaaataatcacaaaaggaaaatggatTCCGAgatgattaataatgataaatcttCGTACAATGGAATATGTAACGaatGTACGCTACCAACCGAAGAATCAAATAAGGAGGTGGGAATTGTAAAGGATGAAGAAATGACTCGATCTTCTCATTTTGaggaggaaaataataaaataataaaatcatcgataagagaaacgaatttaaatatggaggatgaaaaattaataaacgatatgaatttaatacctgaaaaaaatcatttgcatACCCATGCAAAATTTATAagcaaaacaattttatcaatgaataatttattggAAGATttaacaccaaaaaaaaaaaacaatgtggATGATGTGGATATGACAAAAATATCCGAACCTGTTTCAGGTGTTGTGACAAACCTTAATGTGGTAGAATgcaaagaaataaaatcgaatgCTCATCTATGTAAAAtacaaaaattcGGTatgataaaaagtaaaaaagttgatttaaaaagggaaaaatcattttgtggTAGTAATAATGTCGAGACTccaaataaaacatttacaaatttaaaaaaagttaaaagaaaattaccgatacttaaaaaaaaaccaagcgGTCacgtatttattttcgataagaaaaaagaaactatTTTTATAGCTAAAAATTCATCGACGATCGATTcggaaattgaaattaaatcatCTCCCGTTGTCGTTGaacttttttctaaaaaaccgCCATCTTTGTATACGATGAATCAAAGTTCCAGCCAAGAATCTACATTGCAAAATCTCatggaaaaatcatttcgtttAAAAGATGCTAATAATACGATAAATACGGATGCTGCTGCTATTagtcaaaatgatttttccgaTAAATCCATTGTCAAATCCGTTTGGGCTttaacaaaagttttattatataaagaCGGTTCGAAAAAGTTAGAAATATTAGAAGCATCCaatACTCTAAGAAATTTTTCGGGGCCTTATGGTTTGGGTTCGTATAACGAACCAGCCACGCCATTTTTAGTCTCCATTAtaGACGGCGGACCAAACATAAAGTTTTTCGAATCACCTGAAACTTTGTCATTATTCGACGGTATTAAATCTTGGCTgcaaaaaaattgcaaaaaggTAACTGATCCTCCAACAGCTAAAAGCTTATCAACTTTGGTTATTCAATTAATTCAATTTCAAGAAGATAATTTTGGTAAAAATGTCAGTAAACCACCTCTCACTCGATTACCCatgaaatgttttttagaTATGAAACCAGGTGGTGCTTTATGTCATATATTAGCAAcagtttttcgttttaaatcgGAGCAGGGGTGGAGAAGATTCGATTTCCAGTCTCCCTCTCGAATGGATAGAAATGTAGAAATGTTTATGCAAGTTGAAAAAGCTTTAATTCAAGCTAAATGCCTAACAATGCCAAATGTATTTATAAAGGCAGATGTTGAAAAAGGTTTACAATCGAAAATCAAAGATATTATTAAACGCCATCAAGGAACCGTAACCGATAATGAAGAGGAAGCTACTCATATTATATATCCACCATGCGATCCTTTGGATGAAGAGTTTGCCAGACCATCTATGAAAAGAGACAAAAATGTTTTAGTACATTGGTATTATTTTCCCGATTCACATGACAGTTGGATTCAAGCTGACCTTCCGATAGATCCTCCTGATTCACCTCCTGTTCATGTTGGACCTTGGAGGGTCGCTGCAACTTGGGTTTTAGAATTAGAACAATACAATGAATGGATGACAGAGGAAGATTATGAAGTGGATGAaacaggaaagaaaaaagttcatAAGCTAAGGTTATCTGTTGATGATTTAATGGCTTCCTCAGATCCGAGCTCGAGGAAAAAaccgaataaaagaaaaaaatcacctTCACCTCCACCGAAATCGGtgagtaaaaggaaaagtacTCGAGGACCTCCCACGCCtgcagttaataataaaaaacatagaggggaggaagaaagTGAAGATTTAACCAAAGATATGGAAGATCCTCCTTCTGACACTAACATTCAAGAAGTAAATTGTACTAAACCCGGCACATCAAAAAAAGATAGTGATTTACAACCGATTAAAGGAGGAACGATGACGGATTTGGAAGAGGGAGACATGGATAAAGTTGACGAAAGCAGTCAAAACACAAAAACTTCCGATTCTAAtttcatagagaaagaaaaagaaaaagacaaagagtCGAAACAGGAAGATAATGTCACGGAACAAACTCATCATATAATCATTCCTTCATATTCGGCTTGGTTCGATTACAGTTCGATTCacataattgaaaaaagagCTCTACCtgaatttttcaattcgaaaaataaaagcaaaactCCGGAAATATACATTTCCTACAGGAATTTCATGATTGATACCTATAGATTAAATCCAACGGAATATTTAACGAGTACGGCATGCAGACGAAATTTAGCTGGCGACGTGTGCGCCATAATGAGGGTTCACGCTTTTCTAGAACAGTGGGGTCTAATTAATTATCAAGTGGATACAGACAGCAGACCGACTCCCATCGGTCCTCCGCCCACTTCTCATTTTCACGTTTTAACTGACACTCCATCAGGTTTACAACCTGTCAATCCGGTAAAAACTCCTCAACCGTCTGCAGCTAAAATGCTTTTAGATATGGACaagaaagacaaagaaaaagatataaaaaaagaacctTTGGACATCGGATCAAATTTCGGACTGAAAATCGATCAGTACGCGAGAAAACCAGCAGCGTTGAAAAATAAAGCTGCTGCTGGTATTACCCGTGATTGGACTGATCAAGAAACTTTACTATTATTAGAAGCTTTAGAGTTGTATAAAGATGATTGGAATAAGGTTTGTGAACATGTAGGAACTAGAACGCAAGATGAATGCATTTTACATTTCTTAAGGCTGCCAATTGAGGACCCGTACCTAGAGGATCCCGATGCAGAAGGTGGAGCTTTAGGACCGTTGGCGTATCAACCCATACCTTTCAGTAAGGCTGGTAATCCGGTGATGTCAACCGTTGCTTTTCTTGCCTCCGTCGTTGATCCACGGGTAGCCGCATCAGCTGCAAGAGCCGCCATGGAAGAATTTGCAAGTATAAAAGATGAAGTTCCAGCGGCTTTATTAGATGCTCACATTAAAAACGTGGAAGCTTCAACTACGGACGGTAAATTTGATCCTTCGGCAGGACTGGCTCAAAgtaaaaaaccggaaaaacaaGAACCGATGGATGTCGATTCGGATGTCAAGACggaagaaaatgagaaaaaggagGCAAATTCCCCGGATACCTCGGCTTCGGTTCCTACTTCCGATGGAGACGGTGCTGCTCAACCGGAAACTAAAAACGGAGacGCCGAAGGGAAAACGGAATCTGCCACACCGGAAACGGAACAAGATCGTGTGGTTAAAGATGCACAATTGCAAACTGCGGCTGCAGCTGCGTTGGCATCAGCCGCGGTTAAAGCAAAACATTTGGCAGCagtagaagaaagaaaaatcaaatctcTAGTAGCTCTCCTTGTCGAaactcaaatgaaaaaattagaaataaaaCTTCGACATTTCGAAGAATTAGAAACGACGATGgaaagGGAAGGTTTAGAATATCAAAGGCAAACGCTAATAGCAGAACGTCAACAATTTCATTTAGAACAATTAAAAGCAGCCGAATTTCGGGCCAGGCAACAAGCACATCAAAGGTTAGCCGTAGAACAAGGGGGTCAATGGCCACCACCCAATTTGGCTCCCACGAATCaagtcggttaa
Protein Sequence
MSENNVKTSDIADTVVRQQSDMYKVDLNNLNLSENYEINQIFSGNNVTVYALLESSDEINGSDVMENDNENVGKDMKVLFFKDPTNKINNCDVEMSNSSKGVNTDIALSPKLIEKVQNVLSLNILSSSSSKIPGSTDSEPITSVSSINSALYDTKDVSNVLLVPLFMMNEKPLNNHKRKMDSEMINNDKSSYNGICNECTLPTEESNKEVGIVKDEEMTRSSHFEEENNKIIKSSIRETNLNMEDEKLINDMNLIPEKNHLHTHAKFISKTILSMNNLLEDLTPKKKNNVDDVDMTKISEPVSGVVTNLNVVECKEIKSNAHLCKIQKFGMIKSKKVDLKREKSFCGSNNVETPNKTFTNLKKVKRKLPILKKKPSGHVFIFDKKKETIFIAKNSSTIDSEIEIKSSPVVVELFSKKPPSLYTMNQSSSQESTLQNLMEKSFRLKDANNTINTDAAAISQNDFSDKSIVKSVWALTKVLLYKDGSKKLEILEASNTLRNFSGPYGLGSYNEPATPFLVSIIDGGPNIKFFESPETLSLFDGIKSWLQKNCKKVTDPPTAKSLSTLVIQLIQFQEDNFGKNVSKPPLTRLPMKCFLDMKPGGALCHILATVFRFKSEQGWRRFDFQSPSRMDRNVEMFMQVEKALIQAKCLTMPNVFIKADVEKGLQSKIKDIIKRHQGTVTDNEEEATHIIYPPCDPLDEEFARPSMKRDKNVLVHWYYFPDSHDSWIQADLPIDPPDSPPVHVGPWRVAATWVLELEQYNEWMTEEDYEVDETGKKKVHKLRLSVDDLMASSDPSSRKKPNKRKKSPSPPPKSVSKRKSTRGPPTPAVNNKKHRGEEESEDLTKDMEDPPSDTNIQEVNCTKPGTSKKDSDLQPIKGGTMTDLEEGDMDKVDESSQNTKTSDSNFIEKEKEKDKESKQEDNVTEQTHHIIIPSYSAWFDYSSIHIIEKRALPEFFNSKNKSKTPEIYISYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTPIGPPPTSHFHVLTDTPSGLQPVNPVKTPQPSAAKMLLDMDKKDKEKDIKKEPLDIGSNFGLKIDQYARKPAALKNKAAAGITRDWTDQETLLLLEALELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDPDAEGGALGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRVAASAARAAMEEFASIKDEVPAALLDAHIKNVEASTTDGKFDPSAGLAQSKKPEKQEPMDVDSDVKTEENEKKEANSPDTSASVPTSDGDGAAQPETKNGDAEGKTESATPETEQDRVVKDAQLQTAAAAALASAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREGLEYQRQTLIAERQQFHLEQLKAAEFRARQQAHQRLAVEQGGQWPPPNLAPTNQVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-