Phum003946.1
Basic Information
- Insect
- Pediculus humanus
- Gene Symbol
- snpc-4
- Assembly
- GCA_000006295.1
- Location
- NW:132246-134636[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5.2e-05 0.031 13.7 0.3 4 43 193 247 192 249 0.88 2 5 9.3e-08 5.6e-05 22.5 0.2 1 38 256 295 256 300 0.92 3 5 1.5e-12 8.8e-10 37.8 0.5 3 46 309 356 307 356 0.97 4 5 9.3e-05 0.056 12.9 0.0 1 43 361 402 361 405 0.94 5 5 1e-14 6e-12 44.8 0.3 3 42 411 450 409 453 0.96
Sequence Information
- Coding Sequence
- atggaCGAATTTTTTGAAATCCTTGACTGGCCGGATAGTAGTTATTCATCTATAAAAACCGGATATTCCTGCAATATtcaaaataatgaaaacgagaataaaaagaatacTTTGCTTGATAGTAATGGTTTTTCGAAGGATGATTCGAACAgcgttttaaaagaaaattctcaaAATAATACTGTGATTTGCAATGAGCCTCAATctagttttaatttaaaagatccTCCTGATATTAATGAGATTTTGGAATTagatgaaataaatataaaacccACCCCACATAATGTTAGTGTTCTTAATGCTGCAtgtcaaaaagttttaatagaaATGGAAAGTACTCTTCTTAatttacttgaaaaaaatcGTGCCGATCAAGAAAtcgttttgaattatttaaattctaatgAAAAACCTACTGTGAATAGTGaaccaaagaaaaaaacttttagcaGTCTTTGcattccattttttaaaaatgaattaggTTATCCTCCACCTCAAAATCAAgatgtaataagaaaaaagagaaatcatAGTCATTTATCTGTTGAAAGTGTGTATGTGTCACACATTTGGAGTCCCAAGGATTCTAATTTATTAGTTAAAGCTGTAAATGaagagcaaaaagaaaaatcaaatggTAAATGTATTGATGCCAATTCAATAGATTGGATGAAAATTTCAGCTTCTtacatgaatgaaaaatttaccgaTTCAGAATGTAAATCCAAATGGATATTACATTCAAGTCCAAGTGTGAACAAATCTCCTTGGAAAtccaatgaaattaaaaacctaATGTCTATATCGAAGAAATATGGTAAACAAAATTGGGATGAAATAGCTATCGAATTAGGAACAAACAGAACAGGTTTTCAATGTTGTGTAAAATATCACATTCAACAGAATAGAAATGGCAGCAGGTGGTCCAAAGAAGAAGATTCAGCTTTAATATCATTAGTAAAACAATATCAAATTAAAGATTATATTCCATGGAAAAAAGTAGCTTGGAACGTTGATGGAAGAACACTTAGGCAATGTTACGAAAGATATAATTACCATTTACAAGACATAAAAAAGGgatattttacaaaacaagaagattttttattagtttatttatattctcAACTTCACAATTTTAGAGAAGTTGGAAAATATTTCCCCTATAGAGTCCCCCCTCAAATACGAGCAAGGTATGAATACCTTGTCAAATCTGCGATGCCAAAATTTACCAAAGAAGAAGATAAATTATTAGCAGAACTTGTTGTGAAATATGCACGTAACTGGAATAAAATAAGTGAACATTTTACAAACCGTTCCAAGCTTCAATGTAGAAAAAGATGGGCCGACATACAGAAAGAAATCAGtcttaaagttaaaaatgataatgagagTGACAGTGATGTTGATAGCGTGGATTTAATATCCGATGAAAATCCAAAcacggaaaaacaaataaaattagatGCAAACGTTTTAAATCCATCGTTGACTTCGAGTTCgagcaggaaaaaaaaacaacacagTTTTTCTCCCGAATATGTGAATTTAATGAACTATTGCAAACACagttacaaatttttattcggtCCGAAACCACGACAACCCACGGAAGACGCagataaaaaacttttgtgcgataatttaataatttcaatgaaAAGTTTAGGAATCGAAAACGTTAAAAGTTCTTTCGACGTGTCCGCGTTATCAAACGATTGCGAATTTGACGCAGAAGATGTGGAAacattaaaaagaattaaaaaaagcgAGGAAGACaacgaaacggaaacggaaatcgaAGTCTGTCACAAAATAATACCTCCCAATTACGTGACGTTGGTTGGCGCGAGAACGTTGACTTTAAACAaaggcaaaataaaaaatctttgcgaattttacaaaaaagacACGAAATCGATTCAAACCGGTTTTTCGGACAACGAGAGAATGTTATTCAGCGatgctaaaaaattattcaaatcgaGATTGAAAACGTTGTTTGCGTTTCCGTTGATTTTGTCGAACATTTCGCCGAACgttatcgatttgaaaaatgtaaaaaaaggaaaagcgaaaaaaagcAAACCCTTGTCGCagagacaaaggaaaaatcattcgaaaatGATGAGAGCTCATAAGAAATCATCGagcaaagttaaaaaaatgataaataaaattatttcggaTCAAAAATGCGAAGAATTACCTGAAAATGACGAAACGGTTGGGAAACGAAacgaagcagacgaaaaacgAATCAACGGTGACGAAagtacgacgatgacgtcaagtGATTCGAACGTAACCaaagttaaaaggaaaagagggcGACcgccgaaaaatttaaaaaatggcgggaaaaaaattaaactatcagattaa
- Protein Sequence
- MDEFFEILDWPDSSYSSIKTGYSCNIQNNENENKKNTLLDSNGFSKDDSNSVLKENSQNNTVICNEPQSSFNLKDPPDINEILELDEINIKPTPHNVSVLNAACQKVLIEMESTLLNLLEKNRADQEIVLNYLNSNEKPTVNSEPKKKTFSSLCIPFFKNELGYPPPQNQDVIRKKRNHSHLSVESVYVSHIWSPKDSNLLVKAVNEEQKEKSNGKCIDANSIDWMKISASYMNEKFTDSECKSKWILHSSPSVNKSPWKSNEIKNLMSISKKYGKQNWDEIAIELGTNRTGFQCCVKYHIQQNRNGSRWSKEEDSALISLVKQYQIKDYIPWKKVAWNVDGRTLRQCYERYNYHLQDIKKGYFTKQEDFLLVYLYSQLHNFREVGKYFPYRVPPQIRARYEYLVKSAMPKFTKEEDKLLAELVVKYARNWNKISEHFTNRSKLQCRKRWADIQKEISLKVKNDNESDSDVDSVDLISDENPNTEKQIKLDANVLNPSLTSSSSRKKKQHSFSPEYVNLMNYCKHSYKFLFGPKPRQPTEDADKKLLCDNLIISMKSLGIENVKSSFDVSALSNDCEFDAEDVETLKRIKKSEEDNETETEIEVCHKIIPPNYVTLVGARTLTLNKGKIKNLCEFYKKDTKSIQTGFSDNERMLFSDAKKLFKSRLKTLFAFPLILSNISPNVIDLKNVKKGKAKKSKPLSQRQRKNHSKMMRAHKKSSSKVKKMINKIISDQKCEELPENDETVGKRNEADEKRINGDESTTMTSSDSNVTKVKRKRGRPPKNLKNGGKKIKLSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -