Priv012022.1
Basic Information
- Insect
- Pedicia rivosa
- Gene Symbol
- pnr
- Assembly
- GCA_963082725.1
- Location
- OY720154.1:3451313-3479320[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.66 2.4e+03 -1.5 0.0 22 28 42 48 39 52 0.71 2 2 1.6e-16 6e-13 48.4 3.7 1 35 611 644 611 645 0.98
Sequence Information
- Coding Sequence
- ATGTGTCAGAGTCCACAATTTCACCCTTTACTTACAACTTTTCTGAATAGAAAAACAACACGTGAATTTACACTGAACACAAATGTTAAAAGGGTATCACCAACAGATGGCCTACCAACAATTGTATGTAAATCATGTCGGACACAACTTGATAAATGTCATAGATTTCGTGAAAATGCACAAGGTGCACAAAGGACACTACAAAGTTTTTTACAATATGCATCCAAGCTGAGTGGTAATAAAAAGGAAGTTTTAGCCCAAACATCTGCCACATTAGATGAATTATTAACACCGTCCTGTAGAAAGTCATCAGAACATGCAGCCGCAGCAGCCTTAACTGAATTacgcaataataataataataaacatataaaaacaatagcaacaacaataaaagaagaaaaacgttcatcatcaacatcaccagtacaacaacatcatcatcatcaacagcaacaacatcaacaattacaattacaattgtcacataatcaacaacaaaaacatcaaCACCAACAGCAACATGGAGTTACcacaattttaacaaaaaatcatttagATCATTTAGAAGCTAATTCTGTATCTGTAATACCATTAGATACattaacagcaacaacaaatggTATCCTTAATACATCCCTATCAAATcgtacaaaaaaattaatgcatcaacaacagcagcagcagcaacaacaacaacagcaacaaccaactgtttttcaagtaaaaagtttaacacaattacaacaacattTAGAAACTGCTGCTGTCCTAATGGATAttggtaaaaaaattattatttcaccGCCGACATCAAATCCACAATCACCAAAATTAagtgaacaacaacaacaacaacagcagcagcaacaacaacaacaacaacaaaatcatcaatcacaacaaaaacagcaTCAAAAGCAACAGCAGCATCAgcataaacaacaacaacaacaccagcATCAGCAACATTCTGTGATAAAGaCTCAAGACTATGTTTTAAATAATCTGAAACGATCTCCAAGCAGTGAAGAACTtgatttatcatttaaaagaataaaacaggaaccaataaatgttattcgtaaaacaataacaacaaatcaacaacagcaacagcaacaatcgCAACCGTCcaattttttaacaacaacaacaacaccaacgcCAACAATGTCTGTACGTAAGgatttaattgataataatattgatgaaTTGAGTCAAAATAGTGATTCAAATGATAGTTCTGATTCTGGACGTTTACAAATGGATATATCATCACAGGAATGTCCAGATGATGATAttgaagaaattataaatgttaaaaaagagaaaacaaaacagtataataaaaaaaataatcgtgAAACACCAGACAGTATTAATTCTGATGAACAGCAACGTGGACACCATGAGGGAACTGATCCTGCAACAACACATTTATGGCAAGCATTAGCACATACGACagttaatgGTGGAGGAACTGAGGCTACACAACTACTAAGACGAATGATCAATTGTAGATCATTAGGATTACCGTTACCATCCGGTTTGGGAATATCTGGTAATATCTCGGATCAACCAATGGCGCTACTCAAGaatgaTTCATCGTCTGGTGATCGAACACATAAATCATCATCGGGTAGAAGAAAACAATCTTGTCCAAGTCGGGCACCATTAGAAAATTCAGAAATGTCAGCTGAACCGCCACCTTCATCAGATACAAAAACAGAACGTATTGATATGAATCAAAGTTGGCCAAATGAGGAACGTACAACAAAAGTTGGTTCTGtatcaaaaaattcaaatacacaaaataaagatATGTCATGTACAAATTGTGGtacattaacaacaacaatatggCGTCGTAATATACGTGGTGAAATGGTTTGTAATGCATGtggtttatattttaaacttcATGGTGTTAATCGGCCACATACAATGAGACGTGATACAATACATACACGACGAAGGAGACCTAAAGGGGATAAACTAAGTCGTAGaagaTCAAAAGCACAAGAAATCGTTGTTGATCAAGAAACAATTGATTCAAAAGAACGTGTTAATGATTTACAAGCACTAcaaaatcacaatttattaattgccTTAGGAGGTGTTGCAAGAGGTGTACCACCTCATTTTTCAATGCctCATTACACTCATTTTTTGCGTGCCTCACATAATTTTTCTGGTGGTCCTGGTGAtgatacaacaaataatattgatgatgGTGATGAAAGTTGTGgtgaaaatgaaattgaaacaTGTAATTTACCATTAAATTTAGTAGCAACACAACTAGGTACTGGTGACTCATCACAACATTGA
- Protein Sequence
- MCQSPQFHPLLTTFLNRKTTREFTLNTNVKRVSPTDGLPTIVCKSCRTQLDKCHRFRENAQGAQRTLQSFLQYASKLSGNKKEVLAQTSATLDELLTPSCRKSSEHAAAAALTELRNNNNNKHIKTIATTIKEEKRSSSTSPVQQHHHHQQQQHQQLQLQLSHNQQQKHQHQQQHGVTTILTKNHLDHLEANSVSVIPLDTLTATTNGILNTSLSNRTKKLMHQQQQQQQQQQQQQPTVFQVKSLTQLQQHLETAAVLMDIGKKIIISPPTSNPQSPKLSEQQQQQQQQQQQQQQQNHQSQQKQHQKQQQHQHKQQQQHQHQQHSVIKTQDYVLNNLKRSPSSEELDLSFKRIKQEPINVIRKTITTNQQQQQQQSQPSNFLTTTTTPTPTMSVRKDLIDNNIDELSQNSDSNDSSDSGRLQMDISSQECPDDDIEEIINVKKEKTKQYNKKNNRETPDSINSDEQQRGHHEGTDPATTHLWQALAHTTVNGGGTEATQLLRRMINCRSLGLPLPSGLGISGNISDQPMALLKNDSSSGDRTHKSSSGRRKQSCPSRAPLENSEMSAEPPPSSDTKTERIDMNQSWPNEERTTKVGSVSKNSNTQNKDMSCTNCGTLTTTIWRRNIRGEMVCNACGLYFKLHGVNRPHTMRRDTIHTRRRRPKGDKLSRRRSKAQEIVVDQETIDSKERVNDLQALQNHNLLIALGGVARGVPPHFSMPHYTHFLRASHNFSGGPGDDTTNNIDDGDESCGENEIETCNLPLNLVATQLGTGDSSQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -