Priv001098.1
Basic Information
- Insect
- Pedicia rivosa
- Gene Symbol
- grn
- Assembly
- GCA_963082725.1
- Location
- OY720151.1:15489759-15533384[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 4.3e-16 58.5 4.7 1 35 212 245 212 246 0.98 2 2 3.7e-18 1.3e-14 53.7 6.0 1 35 269 302 269 303 0.97
Sequence Information
- Coding Sequence
- ATGCCAACATCCCACACATCACCCCAAGTATGTAGGCCACATTTTCATTCAACATTACATTGGTTAGGCGATGGACCTAAATCATTGCCACATGGAAGTGCATGGAGTCCATTTGCATGTCCACAAGATCCACAAGATAAAGTTGGTCAAATGCAAGGTCCACAAGGTACAACACaacatttgttttcttttccaCCAACACCGCCTAAAGACTCAACACCTGATTCAGTACAAACGGGACCAGCAGAATATCAGgCGGCTGTAAATGCATTTATGCATACGGCACAAGCATCAACTACCTCAGTAACATCAGATTCAAGTTGTACATTAGATATAAAACCAACAATTTCAAGTGGTCAATCGGCACCAAAACAACGTGAAGGTACgacgacaacaacaaatagtAACAATAATAgtagtaataataatacaacacataataataataatggtggGCTATTTGATGGACCACCAAATGGTTATGCTGcctatgaaaataattatggaTATCATCAAAATGGTGGtagtggtggtggtggtgttGGACCATTTCAAACAAATACACGTCCAACAATAAGTCCACATACAAAACCACAACGTACCAAAGCGAGAACAAGTGCCGaGGGCAGAGAATGCGTTAATTGTGGTGCAACATCAACGCCATTATGGCGAAGGGATGGAACGGGACATTATTTGTGTAACGCCTGTGgactttattataaaatgaatggTCAGAATCGACCCCTAATCAAACCGAAACGAAGACTGtCACTTCAAAGTGCGGCACGAAGGGCAGGCACATCATGTGCGAAttgtaaaacaacaacaacaactctGTGGAGAAGAAATCAAGGAGGTGAACCTGTTTGTAATGCTTGTggtctttattttaaattacataatgtGAATCGACCATTGACAATGAAAAAAGAAGGTATTCAAacaagaaacagaaaattatcatcaaaatcaaagaaaaagaaaggaatGGGTAGTTCGTGTCATCCATTAGGTGGACATTTGGGTGTTGGTGATTTAATGAAACCATTAGATCCATCAAAAACATTTGGTGGTGGTTTTCCAGGACCAATGGGTCAACACGGTCATTTATCTACAGGATTACATCCTGCACATGCGCATATGCATAGTGGTTGGTATAGTGGTATGGGAGCACTTGGCTCATCGGGAAGTTTACAAGGCGGTTTTACTACAGCTGGTGCATTAGGCGGTGGCGTTGTTCCTCATTCACAACCGTACTCTCATGTCGCATCACTTGGACTGAATTCAATgGCCGCTTGGAGATCAGATTATACGTGA
- Protein Sequence
- MPTSHTSPQVCRPHFHSTLHWLGDGPKSLPHGSAWSPFACPQDPQDKVGQMQGPQGTTQHLFSFPPTPPKDSTPDSVQTGPAEYQAAVNAFMHTAQASTTSVTSDSSCTLDIKPTISSGQSAPKQREGTTTTTNSNNNSSNNNTTHNNNNGGLFDGPPNGYAAYENNYGYHQNGGSGGGGVGPFQTNTRPTISPHTKPQRTKARTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYFKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGMGSSCHPLGGHLGVGDLMKPLDPSKTFGGGFPGPMGQHGHLSTGLHPAHAHMHSGWYSGMGALGSSGSLQGGFTTAGALGGGVVPHSQPYSHVASLGLNSMAAWRSDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -