Basic Information

Insect: Pedicia rivosa
Gene Symbol: Znf800
Assembly: GCA_963082725.1
Location: OY720153.1:28780711-28784610[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.033 1.8 9.4 0.3 1 21 58 78 58 79 0.95

2 5 0.00079 0.044 14.5 0.3 2 23 248 270 247 270 0.95

3 5 0.032 1.8 9.5 0.3 1 23 277 300 277 300 0.96

4 5 0.0015 0.082 13.7 0.0 3 21 356 374 355 375 0.93

5 5 0.00017 0.0092 16.7 0.7 2 23 516 538 515 538 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.033	1.8	9.4	0.3	1	21	58	78	58	79	0.95
2	5	0.00079	0.044	14.5	0.3	2	23	248	270	247	270	0.95
3	5	0.032	1.8	9.5	0.3	1	23	277	300	277	300	0.96
4	5	0.0015	0.082	13.7	0.0	3	21	356	374	355	375	0.93
5	5	0.00017	0.0092	16.7	0.7	2	23	516	538	515	538	0.94

Sequence Information

Coding Sequence: ATGAAGAGTAAATTACATGGTAACGAGACAGATAGTCAAAATTTACCAGATTTAAGTATCTTACGTACACCAATATCAACATCGGTAACAGGTTTCATTGAAACAATACAAGCATTTGAAAATGGAACACCAGAGataAGAAATCTTCTTGCGAATGAGTgtgatattttatatgaatgcAGAGTTTGTCGTAATATATTTAGAAGTTTAGCAAATTTCATATCACATAAACGTGTCTATTGTAGAGTTAAATTTAGTTCTAgtcatcattttcattttcgtaATAATGGATTTATTgatcaGGATGTTTCAACAATATTGGAATCAGATATGGATAAATATTCAGATGGTTTTTTacataaagataaaaatcaagaaattgtaaataaagATTTAGGAAGTATTATTGAAAGACTtatgaaaaaacaacaaaaaaatgaagttaTGAAATTAACTGATTTTTATGATCAAGTTGATCAAAAATTAACACgagatgaaaaatttaaaagaaatcatACATTAGAATTGGATAAAATGGATAATAGTAATGTTGCTGTTTATCAAACAATTaagcaaaaaaatgaaaatcgtgataatatgaaaaaagaaaTAAATGAAGTTCATAAATTAtcacttaataaaaatactgTACTTGATTCAACTGGTAAAATAGCTGAAATTGATGATACattattaatgaataattttgatgATAATATGAGTacagaaaatgattttatatattgtgaaatttgtaattataaatttgatacagaaaaaatgttaaaattacaTATCGAAGTTAAACATATACCTTCAACAGTTGTTTATCAATGTCCAACATGTTCAATAACATTTTTACAACCAGCTGCTGTTATCAAACATTTATGTAATGATCATAAtaAATCATTAAGAAAAATACGCTTAATGAgagaaacaatttataaaaaacgtTCACGTATTGATGAGGTACAAACAAAGGGACCAAGTCGTGAACTAATACAATTACAAATGGataacacaaataatatagaagaaaaagataaattagaCTTAAATTCATTATGTCCTTATTGTGGTAAAACATTTGAACGTAGAGCTGTACTTGTTGGACATATTAATAGTTGTATGTctaaagcaaaaacaaaatctttaaataaaataataaataaaacaaaattaaaggaGAATTCTGTTGAAAAacatgataataataatattattaattcaacaacaattattgaaaataataatcatgaagaaaatgaacaaaataaaaaaattgatgatattccactagaaaaaaaattaaaaattaataaacgtaaacgtaaaaatattgataaaactATAATATCAGATGAATTAATAGAAACAATAACGGTGGAACCAAATTTacatccaaataaaaaaatagcaattgaattattatcaAATGATAGTCAATTGGTAAATActgataataatgataattgtaaaaatattaatataattgataaagaaacaacaacaacagtaacaataACACCACCACCGAAAATTTTAGAATGTGATATttgtgaaaagaaatttttaaattcaagtaATTTAAAACGTCATACGGCTATGTTTCATTAtcgtattaaaaattttggttGTAAACTATGTGATTTTCGTGGTTATAGAAAATTTGATATTGTTAATCATATTGGTAATACacataatattaaagaaaatgtcaTCGATAATgttcttatatataaaaatgatgataaaacattaaaagataaagataaaataaaagataaagataataataaacaaatagaaaaactagataataatacattattaaaaataaataataatataaatgataCGGATATTagaataattgataaaattaaaaataatgttgaaaatataattataaaaaagaaaagaatgcgtttaataaaaccaaaaatagtACCACCAGAAATGGATAatacacaaattaaaattcaagCATCATCAACAATTGTTAGTTCAACAATAAAACGTCCAATACGTAATCGTATAAAACCAATACAAAAAGATTTTGTTTATGActtatcaaatttattaaaaaaagatcAAGAATTAACGAAAGAATATCGTATACCAatatttccaataaaaataccaaaaagACGTAATACATTACAAACAATTGATGATACACATTTACCAATTATGAAAcaagataatattaaaaataaagaagaggATGAAGAAGAACTCGGAGGAGAAGATGATGAAGGAATAGATGAAACAATATTATCAATTGATTCcagtaataataatagtagTATCAATAGTCCACCAGAAGTTCCAATTACTGATATTGAAGCGATCAAAGGTGCTGCTTTTGAAATGgctaaaattgaaataattaattcaaccGCTTGTTTTAAAAAAGATTTAGAAATTCCGCCAATACAATATGTAATACCAGCAAAAATACAAGAGTTAAGACGTTCAGATCCAATACaagatttaacatttttaaaaaatgataactTAAAAAATGAATGTAAAGTACAACAGTTAAGAAAAAAGTTAGCAGACACTTTAAGAAAGAATAgcaatagaagaagaaaattaagtCTTACAGCATCTGCAGCAGGAGGAAAAACTGGTACAGCAGTAATAAAATCTCCCAATAAACATCATAATGTATCAACGCCTATAGCTCCTAttgatttagattttaatgataaaatagaattaaaaatattggaaaCATCAACATCAGAAATATTAACTGATAATTTGATAAATGAAGAAACACAAATACCAATAAAATGCCCAACTGAAAAGGaatttcaacaatatttaGTTACAAATCTTTTAACAGAaccaatcaaaaaaattgttttagaTGTACCAGAATTACAAAAACTTAAACGTACAAATTCTAATGATAAATCTGATGATTCTTCTGTTGTTGATCAATag
Protein Sequence: MKSKLHGNETDSQNLPDLSILRTPISTSVTGFIETIQAFENGTPEIRNLLANECDILYECRVCRNIFRSLANFISHKRVYCRVKFSSSHHFHFRNNGFIDQDVSTILESDMDKYSDGFLHKDKNQEIVNKDLGSIIERLMKKQQKNEVMKLTDFYDQVDQKLTRDEKFKRNHTLELDKMDNSNVAVYQTIKQKNENRDNMKKEINEVHKLSLNKNTVLDSTGKIAEIDDTLLMNNFDDNMSTENDFIYCEICNYKFDTEKMLKLHIEVKHIPSTVVYQCPTCSITFLQPAAVIKHLCNDHNKSLRKIRLMRETIYKKRSRIDEVQTKGPSRELIQLQMDNTNNIEEKDKLDLNSLCPYCGKTFERRAVLVGHINSCMSKAKTKSLNKIINKTKLKENSVEKHDNNNIINSTTIIENNNHEENEQNKKIDDIPLEKKLKINKRKRKNIDKTIISDELIETITVEPNLHPNKKIAIELLSNDSQLVNTDNNDNCKNINIIDKETTTTVTITPPPKILECDICEKKFLNSSNLKRHTAMFHYRIKNFGCKLCDFRGYRKFDIVNHIGNTHNIKENVIDNVLIYKNDDKTLKDKDKIKDKDNNKQIEKLDNNTLLKINNNINDTDIRIIDKIKNNVENIIIKKKRMRLIKPKIVPPEMDNTQIKIQASSTIVSSTIKRPIRNRIKPIQKDFVYDLSNLLKKDQELTKEYRIPIFPIKIPKRRNTLQTIDDTHLPIMKQDNIKNKEEDEEELGGEDDEGIDETILSIDSSNNNSSINSPPEVPITDIEAIKGAAFEMAKIEIINSTACFKKDLEIPPIQYVIPAKIQELRRSDPIQDLTFLKNDNLKNECKVQQLRKKLADTLRKNSNRRRKLSLTASAAGGKTGTAVIKSPNKHHNVSTPIAPIDLDFNDKIELKILETSTSEILTDNLINEETQIPIKCPTEKEFQQYLVTNLLTEPIKKIVLDVPELQKLKRTNSNDKSDDSSVVDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -