Basic Information

Insect: Pedicia rivosa
Gene Symbol: ZNF711_1
Assembly: GCA_963082725.1
Location: OY720151.1:7068741-7071215[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.2e-05 0.00065 20.3 1.9 1 23 308 330 308 330 0.98

2 10 0.00061 0.034 14.9 2.7 1 23 335 357 335 357 0.97

3 10 6.7e-06 0.00037 21.1 2.8 1 23 363 386 363 386 0.98

4 10 5.7e-06 0.00032 21.3 1.5 1 23 392 414 392 414 0.96

5 10 0.00013 0.0073 17.0 4.1 1 23 420 442 420 442 0.97

6 10 0.13 7.2 7.6 3.7 2 23 466 487 465 487 0.96

7 10 0.0001 0.0057 17.3 4.0 1 23 493 515 493 515 0.97

8 10 0.00069 0.038 14.7 0.8 1 23 521 543 521 543 0.97

9 10 1e-05 0.00057 20.5 1.1 1 23 549 571 549 571 0.98

10 10 3.1e-05 0.0017 18.9 1.4 1 23 577 599 577 599 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.2e-05	0.00065	20.3	1.9	1	23	308	330	308	330	0.98
2	10	0.00061	0.034	14.9	2.7	1	23	335	357	335	357	0.97
3	10	6.7e-06	0.00037	21.1	2.8	1	23	363	386	363	386	0.98
4	10	5.7e-06	0.00032	21.3	1.5	1	23	392	414	392	414	0.96
5	10	0.00013	0.0073	17.0	4.1	1	23	420	442	420	442	0.97
6	10	0.13	7.2	7.6	3.7	2	23	466	487	465	487	0.96
7	10	0.0001	0.0057	17.3	4.0	1	23	493	515	493	515	0.97
8	10	0.00069	0.038	14.7	0.8	1	23	521	543	521	543	0.97
9	10	1e-05	0.00057	20.5	1.1	1	23	549	571	549	571	0.98
10	10	3.1e-05	0.0017	18.9	1.4	1	23	577	599	577	599	0.97

Sequence Information

Coding Sequence: atggaTATTACTAATTattcttcaataaatatatgtCGAATATGTGAAAGTGAAGACGATTTGTGTTATATATTTCTTGAAGAAAATAGACAtgttctaaaaaaattaagatctTGTGCAGATATTGATatTGATTTGAATGATGAGCTACCAAATGGAATATGTAATGtttgtgttaaaaatttagaattttcatataaatttaaaattcagtGTGAATATACTGATAGCAAAtttagaaattcaattttattagcaaaagaaaaacaaacatcaactacaaataattataatattgtcgAAGAAATTGAATACGAAAATAATATTGTGTTTGCTGAATATGTGAATGTTGATCGAGTTCTTATTGTTGAAGATGAGGATATTGATGATGTAAATGAcgaaaagaataagaaaataaataaaaaattatcaaaatatatattagtTGAAgataatacagaaaataatgttaaattagaaacaaatGATGATGAGGATTCATTGATAAATAAagatatattaaaaaatgacaGTCATCATATATatgaaagtgaaaatatacaagaaaatgATGCGTATACAGAAGATTTTGAATTAGAGGAACAAATTGATAATAGAAATGATGTTTCAGTTGAAAGTATCGAAGAATATGCttatgaaaatgatgaaatacaagaatatattgatgatgaacaagaagaagaggaggaggatgaagatgatggtgaaataataaatattgatgatggagaaattaaaaatactgatgatgatgatgatggtgaagGAGATGAAgaattatatttgaataaaatagaagagGAAGTTTTAGAATCAGAAGACGAAATTATACTCTCAAAACGCAGAACAAAACGTCAGCGTTCATCAAAATATCGGGAACAATCAAAAAATGCAAAAGGATATATATGTGAAACATGTGGTGAAAAGTTTAGAACCTATTctgattttaataaacataaaaaagtaCATGGAAAAAGACGTTTTCAATGTGAACAATGTGATAGGTGGTTTTCCAAAAAATATCATCTTAAAAATCATGAAATTGTACATACTGGTGAAAAACGTTATAAATGTACACAATGCAATAAAGTATATACAAATCATGGTAATTTAGATCGGCATGTTCGTGTATTTCATCGGAAAGAAAGATTACATGTTTGTGATAAATGCGGAAAAGGATTTTCACAGTCAACAACATTAAAACAACATTATGCTGTGCATATTGAGGAGCGTAATTTTGAATGTAATATATGTCATAAAAGATATAAAACacaagaatatttaaatttacataaagaTAGACATTTACCAATggatcaaagaaaaataaaagcaccaatgataaagaaaaagaaacctGTTATCAAAATATGTGTTTGTACATATTGTGGTAAAAAATCAAATAGTGTTGCATTGCATCAAAGTCATATTAGAACGCATACAGGTGAAAAACCTTATGAATGTGAAACCTGCcataagaaattttcttttcaacaaTCATTAAAATCACATTTACTTTTACATACTGGTGAAAAACCATTCAAATGTGAAGCATGTGGTTTAACATTTAGGCAAATAGGACATTTGAAAGGACATAAACTTGTTCATACAGGTGTAAAACAACATAAATGCTTAGTTTGTGAAAAAACTTTTGCATTACGTGGTAATTTAACAGTTCATATGCGTTTGCATACAGGTGAAACTCCCTATCATTGTTCTATTTGTCCAAAAAAGTTTTATGATTCAAATGGTTTAAAACGGCATGCACTAATACATGCAAAACATCAAGATCCTAATATAATACATCATAATAATGAGGACGAAATTGAAGAGGAggataatgataataatattagtataataacaacaacaagatcatcatcaacatcatcattaGAACGTCAACAatctattattaaaattatatcagATAGACAATCCGATAATAAATGTGATTTAGCTGAATTATGTTATGATGGTATAATACAAACAAATGATACAACAGATTTACATAATAGACAAGAAATTGTTGAGAATTTACAATATGATAGacaagaaagaaataattacaTCAATATAACAACaccaattaattttgttaaaaaaattaaagatgaacattga
Protein Sequence: MDITNYSSINICRICESEDDLCYIFLEENRHVLKKLRSCADIDIDLNDELPNGICNVCVKNLEFSYKFKIQCEYTDSKFRNSILLAKEKQTSTTNNYNIVEEIEYENNIVFAEYVNVDRVLIVEDEDIDDVNDEKNKKINKKLSKYILVEDNTENNVKLETNDDEDSLINKDILKNDSHHIYESENIQENDAYTEDFELEEQIDNRNDVSVESIEEYAYENDEIQEYIDDEQEEEEEDEDDGEIINIDDGEIKNTDDDDDGEGDEELYLNKIEEEVLESEDEIILSKRRTKRQRSSKYREQSKNAKGYICETCGEKFRTYSDFNKHKKVHGKRRFQCEQCDRWFSKKYHLKNHEIVHTGEKRYKCTQCNKVYTNHGNLDRHVRVFHRKERLHVCDKCGKGFSQSTTLKQHYAVHIEERNFECNICHKRYKTQEYLNLHKDRHLPMDQRKIKAPMIKKKKPVIKICVCTYCGKKSNSVALHQSHIRTHTGEKPYECETCHKKFSFQQSLKSHLLLHTGEKPFKCEACGLTFRQIGHLKGHKLVHTGVKQHKCLVCEKTFALRGNLTVHMRLHTGETPYHCSICPKKFYDSNGLKRHALIHAKHQDPNIIHHNNEDEIEEEDNDNNISIITTTRSSSTSSLERQQSIIKIISDRQSDNKCDLAELCYDGIIQTNDTTDLHNRQEIVENLQYDRQERNNYINITTPINFVKKIKDEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -