Priv001035.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pedicia rivosa
Gene Symbol
hang
Assembly
GCA_963082725.1
Location
OY720151.1:14177974-14185541[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0027 0.15 12.9 2.3 3 23 290 311 289 311 0.95
2 22 0.094 5.2 8.0 0.7 3 21 413 431 412 432 0.95
3 22 0.13 7.2 7.6 0.4 3 23 477 498 475 498 0.90
4 22 0.033 1.8 9.4 0.2 2 23 539 561 538 561 0.94
5 22 0.0017 0.095 13.5 0.4 3 23 599 620 597 620 0.95
6 22 2.7e-05 0.0015 19.2 0.4 1 23 628 651 628 651 0.98
7 22 0.015 0.81 10.5 0.0 1 23 664 686 664 686 0.98
8 22 0.016 0.92 10.4 1.6 1 23 689 711 689 711 0.98
9 22 0.0053 0.3 11.9 0.6 1 23 717 740 717 740 0.94
10 22 0.013 0.75 10.7 0.0 2 23 861 882 861 882 0.98
11 22 0.02 1.1 10.1 1.4 2 23 913 935 912 935 0.94
12 22 0.02 1.1 10.1 0.9 2 23 944 966 943 966 0.95
13 22 0.0019 0.11 13.3 1.8 1 23 1004 1027 1004 1027 0.97
14 22 0.00028 0.016 15.9 2.9 1 23 1070 1092 1070 1092 0.99
15 22 0.00078 0.043 14.6 1.0 1 23 1100 1123 1100 1123 0.96
16 22 0.00012 0.0068 17.1 0.9 3 23 1132 1152 1130 1152 0.97
17 22 0.0001 0.0057 17.3 2.9 1 23 1222 1244 1222 1244 0.98
18 22 0.055 3.1 8.7 0.1 1 23 1296 1318 1296 1318 0.92
19 22 0.081 4.5 8.2 0.1 2 23 1356 1378 1356 1378 0.90
20 22 0.077 4.3 8.3 1.7 2 23 1405 1426 1404 1426 0.96
21 22 3.5e-06 0.00019 22.0 0.2 3 23 1440 1460 1438 1460 0.97
22 22 0.012 0.66 10.8 3.7 1 23 1626 1648 1626 1648 0.95

Sequence Information

Coding Sequence
atggatGATGAATTTAGTCAAATAAATCGTCGAACTTGTTGTCGATTATGTTTGGCACCGGACAATGAATGTGTTCCCATTTTCACAACTTCAGCTGCTGATAAGGAGCCATTATCGTCAAAAATTCAAGCTTGTGTCACTATTAAGGTTCATGAAGCGGACAGATTATCGTCACGGATATGTCACTCATGTATCAGTTATTTAAATTCATGGCAAAGCTTCAAGAATCGATGCTTAAACtcccaaaaaaaacaaaggacATGGCTTATGTTAATGActgaaaaagataaagaacaacaacaacaacagcatcaacaaccgcaacaacaacaacaaacaaataatgcAGCCAGAAggaaattacaacaaataaataaaaatattatatcatATGAGAATTCTACAGGAAAACGTCGTCGAAGTTATTCTGGCGGAGACCAACAAATTAATGCGTCATTCAATGATGCCCAACCAATTGAGGGGTTTGAGTTGGGAACTATTAAGAAAGAACCAATTGATGCAGAAACTGATGTCGAGGATGAACCAACTGCAATGTCAGATgATCCCGTTTCATTAAAAATGGAATTAGACCCAACACAATTTTTAGCCCGTaatgaagaagatgatgaagaatatccaattgatgatgatgatcaaaTAATGCCGCCAATACCAATAATGTCGATGGAAGAAGGACCACCAATTTTAACATCACTGGGACTAACACATATAAATCATGTAAATCCTTACAATTTTCTGgCAACTGAACATGAGTTTCCCGATGAATCTCAGaatgatgataaaaattcttcattaTATAATATGCAAGTAAATCAGAAACGTCGATTAACACCAGTTCCAGCATGTTGTTCGATATGTGATATGAAATTTTCAAATCGTGCTAATGCAAGACGTCATGAACGTAATATTCATGGTGTTATATTAAATCCAATGAGTGTGGCGTTAGTACCACAAAATCCAATAACAAGTACACCAAATCCAAAACCAgttgtacataaaaaaattgtacaattacCAGAAGTTATTGATTATGATAACCCACAAAAATATCGTTCATTATTAACCGAACAAAAATTAGCGTTTATGGTTAAAAATATGGCGTTTATGGAACAATATCAAGATATGACTTGTGTTTGTTGTGATCGAcaattcttaaaatataaaacatttatgtCACATATGCGTAAAAAGTTTCAATATTTACCAcgtaatttatgttttaaatgtttaaaacaatttgaaaCAAAGGGACAATTTATTGcacatttaaagaaaaaaaactgtattaatttatacaaaatctATATGGCGGATGATACAATTATAAAGCAAGAAGTAACAGCGATGACCCCAGAAGATAGTACACGTGTTGGTACCAAAGAAATAATTGCAAATAGAGTTTATGGTTGTAAACTTTGTACACAAACATTTCGTTTAAAAATGGATTTTCGTGCTCATGTTTATGGAGCACATGCTGATgaacaaaaaagtaaagatGTAACAGGTGCAGCATGTGCATTTTGTAATGCTGAATTTGATGAACCAGTTCTAAGAAGACGTCACTATAATAATCttgattgtattatatttttaatttgtggtAATTGTGatgaaaaatttgaaacacATGCACAATATATTGAACATGTATATACAGCACATTTAACAAACATGTCAATTgtaaaaacattaaatgaaaCATTAGATGCATCAGATGAATTTGAtgcaacaaataatatatcaccATCAACAAGTCTTAGAACACCACAAAATTGTGCTGTTTGTGgtaaacaatataataattattataatgtaTTACGTCATATGGAAAGTAAACATCCTGATCAATTACCAAGTACATATCAATGTGAAACTTGTCAAGCTGGTTTTCCACGTCAATCAGAATTAAGGGaacatattaaaaaacaacatccAGAAGTACTTATACGTACACCAATAAAAGGTACATTTATCTGTAATGATTGTGGCGCTTTATTAGATAATAAAGAACAATGGATTGAACATATGTTGACACATTCAAAATTTGTTTGCCATGAATGTGattataaaacagaaaacaaaaatgaatttgatatacatttaataaaacatcttaaatttaaattatattcatgtACTCTTTGTAAACATTCTTATAATACAGAAAAGGGACTAGAACTACATATGATTGGTGCACATAATCTTGATCATTCATCAGCAGCGGCAGCCGTTAAAACAGCAGCAGCGCCATTATCATTCGCAGCAACAATAGCAGCTGCAGCAGCTTCAGTAGTAGCAGCTTCTAGTTCATCATCAATTAGTGAAGGTGGACAAAATGGGAATGCAGATGCTACTAAACTAAGTCGTGACATAAAAgctgaattattattattaactgaaaataaaaactcaggaaaagaaaaagaattacaaGCATCAAAATTAGAAGATATATCACATTTAATACCAACACTTGAACGCAttacaaaaactaaaaaagataATGGTGATTTCTCAAGAGAAAATAATAGTGAAGAGCCAATACTGCCAAAACAACGTGAGTGTCCAATATGTAAAGCAGTGTTTAATGCTGGTGTAGCATTTTCAAATCACATGCGAACACATATGATATCAAATACAGCAGGTAGTGGCGGACAATCAAAAACTTCAACATCTGGTGGTGGaatatcatcatcaacaaataGTACCCGATTACGTTGTCGTGTTTGTCATAAACGTATAAATACAAATCTTGGATTAAAACGTCATATGTTATTGGCACATCAAATACGTAATTCAACATTTGTAAAATGTTATATCTGTTCAGCTGAATTTAGTAATCATAAAGGTTTAAGGGTTCATCTATTTCGTGCacatcaaataacaaaaattgagGATGAACAACAACCCGTTATATCAGCAGTATTACCAGTAGATCCTGTTATAACATCTGTTCAATCAATTCATGTTAATACTGATATGAAACATTTTGAATGTGATGTTTGTCATACagtttatagaaattttcaaGATCTTAAAGTTCATAATAAAACTGTTCATGGTTTCGAcattaatgatgaaaataatgaatcacaaataaatccaaatcctattcaacaaattattgctgataatgaattattaattaatttaccacaaaaattacaaacaacaaatgaaatatGGTTTCAATGTCGTtactgtaatgatacatttaattctagtaaaaaattaacaatacaTATGAATACACATGATGAACATGATCAATCTGATTATTCATGTAAAGATTGTGGAAATGTTTATGCAACAAGAAagtctCTTTGGGTTCATCGTTATAAAAAACATCCACGTCCACCAAATCCAATTATATGTGAAATATgtaagaaaacatttttcgATAAAACAGAATTGTATTATCATTTAAAAACGCATtcacaacaattacaacaaacGGAAAATTTGTCTTAtgtacaacaacagcaattacaattacaacagCAACGTCAACTAAAAGATGAGTTAGAACGACAACAATTAGAAGATGGTaatgataatgaaaatgatgataatattattgaacaacaacaacaacagcaacaacaaaaatcaaaacgtCAGAAATCAGCAACTGTGGGTATTTATTCTTGTCATGTTTGTGGGCAAACGTTCCATGATAAAGGTGTATTAAGTAAACATTTACGTATTCATgaaatgcaaaataatatGTTCAGTAATTCACCATTGTTAACATCATTTGATCAATCAATAACTGGAGTTGGAGCTGGTGCTGGAGGAGGAGGGGCAGGTGTATCTGGaattgattataaattatctTATCAGGATAATATGGTAAATGGAGAATACGCATGTGATCTATGTCCAAAAACATTTCCAATATTGAATGCACTTCATGTTCATAGAGGATGGCATTTTAGGTCACCAAGCGGACGACAAGTAACAGAACCTGGTAATACATGGCAACCTGATTCAATACCACCAAGTAAATTAAGACGTATGAAAAATCCATATGGTTCACCACCAGTATGTCCATATTGTATATCAACATTTGCAAGTACAAATAATTTACGACGTCATATTGTTGAAGTACATAAACGTAATGAAGCAAAATTAATGCGTGAAAAAGGTAGTGGTGATGGacaaaataatgtatttatagaaaaagtaaaagaatgTAAAACTTGTAATATAACATTTAATACATGTACAGAATGGATTgatcataaaataatacatGCTAGAAATCAAAAACCATCAACAACATTTGAATGGGCATGTGAAATATGTGGTAAAATGTTTACACGTAAAGAACGTTTATTACAACATATGATAACACATTTAAGTAGTCGTGaatttgatgatgatggtgtTAGATTAATAATGAATACAAATAATGATTCTAATTCTGTTGATCAATCACAATTAGGAAGTGATATGAATTTTGAAAGTAATTCACAAACATCACAAAGTTCAATGAGTTCATcaaataatcatcatcaaaataatcttaataatgatgatgatgataataatatggatgatgatgatgataataatgttgatgatgacgataataatgttgatgatgatgatgaagatgatgataatgataatgataatgataacgATGATAATggtgaaaatgttaaaattgatttaagcAGAATTAAACAACTTGttgaaaatgatgatgatgaagaagatgatgatgacgaagacgaagatgaagatgaaaatgatgataatgacgatgacgatgatgacgaagaaaatgattattataataatgatgaaaatatatCAGAACATtccaatcaaaataaaaatgatacaTTTGCCTGTGAATTATGtcatacaaattttaatacaacaaaagaattaaGACGACATGTTGCACATCATATTTTAAATGGTGCTGGACAAGGTGCTGAAACATCATCACCAACATCACCTTCACGTACACaatctacaacaacaacaacaacaacaaaagggactaataattttaaagatacaataacaaaaaatagaaaaaatagtcGAAATTCAACATCatcaccaacaacaacaacaattaatatattttag
Protein Sequence
MDDEFSQINRRTCCRLCLAPDNECVPIFTTSAADKEPLSSKIQACVTIKVHEADRLSSRICHSCISYLNSWQSFKNRCLNSQKKQRTWLMLMTEKDKEQQQQQHQQPQQQQQTNNAARRKLQQINKNIISYENSTGKRRRSYSGGDQQINASFNDAQPIEGFELGTIKKEPIDAETDVEDEPTAMSDDPVSLKMELDPTQFLARNEEDDEEYPIDDDDQIMPPIPIMSMEEGPPILTSLGLTHINHVNPYNFLATEHEFPDESQNDDKNSSLYNMQVNQKRRLTPVPACCSICDMKFSNRANARRHERNIHGVILNPMSVALVPQNPITSTPNPKPVVHKKIVQLPEVIDYDNPQKYRSLLTEQKLAFMVKNMAFMEQYQDMTCVCCDRQFLKYKTFMSHMRKKFQYLPRNLCFKCLKQFETKGQFIAHLKKKNCINLYKIYMADDTIIKQEVTAMTPEDSTRVGTKEIIANRVYGCKLCTQTFRLKMDFRAHVYGAHADEQKSKDVTGAACAFCNAEFDEPVLRRRHYNNLDCIIFLICGNCDEKFETHAQYIEHVYTAHLTNMSIVKTLNETLDASDEFDATNNISPSTSLRTPQNCAVCGKQYNNYYNVLRHMESKHPDQLPSTYQCETCQAGFPRQSELREHIKKQHPEVLIRTPIKGTFICNDCGALLDNKEQWIEHMLTHSKFVCHECDYKTENKNEFDIHLIKHLKFKLYSCTLCKHSYNTEKGLELHMIGAHNLDHSSAAAAVKTAAAPLSFAATIAAAAASVVAASSSSSISEGGQNGNADATKLSRDIKAELLLLTENKNSGKEKELQASKLEDISHLIPTLERITKTKKDNGDFSRENNSEEPILPKQRECPICKAVFNAGVAFSNHMRTHMISNTAGSGGQSKTSTSGGGISSSTNSTRLRCRVCHKRINTNLGLKRHMLLAHQIRNSTFVKCYICSAEFSNHKGLRVHLFRAHQITKIEDEQQPVISAVLPVDPVITSVQSIHVNTDMKHFECDVCHTVYRNFQDLKVHNKTVHGFDINDENNESQINPNPIQQIIADNELLINLPQKLQTTNEIWFQCRYCNDTFNSSKKLTIHMNTHDEHDQSDYSCKDCGNVYATRKSLWVHRYKKHPRPPNPIICEICKKTFFDKTELYYHLKTHSQQLQQTENLSYVQQQQLQLQQQRQLKDELERQQLEDGNDNENDDNIIEQQQQQQQQKSKRQKSATVGIYSCHVCGQTFHDKGVLSKHLRIHEMQNNMFSNSPLLTSFDQSITGVGAGAGGGGAGVSGIDYKLSYQDNMVNGEYACDLCPKTFPILNALHVHRGWHFRSPSGRQVTEPGNTWQPDSIPPSKLRRMKNPYGSPPVCPYCISTFASTNNLRRHIVEVHKRNEAKLMREKGSGDGQNNVFIEKVKECKTCNITFNTCTEWIDHKIIHARNQKPSTTFEWACEICGKMFTRKERLLQHMITHLSSREFDDDGVRLIMNTNNDSNSVDQSQLGSDMNFESNSQTSQSSMSSSNNHHQNNLNNDDDDNNMDDDDDNNVDDDDNNVDDDDEDDDNDNDNDNDDNGENVKIDLSRIKQLVENDDDEEDDDDEDEDEDENDDNDDDDDDEENDYYNNDENISEHSNQNKNDTFACELCHTNFNTTKELRRHVAHHILNGAGQGAETSSPTSPSRTQSTTTTTTTKGTNNFKDTITKNRKNSRNSTSSPTTTTINIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-