Priv002591.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pedicia rivosa
Gene Symbol
SMARCC2
Assembly
GCA_963082725.1
Location
OY720151.1:33831910-33836431[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-14 3.6e-11 43.3 0.2 3 44 643 684 641 686 0.95

Sequence Information

Coding Sequence
ATGGCATCTCTGGGCCCAAAAAAGGATGGAAGTCCTAATACAGAGTATTTTCAATCACCTGAATCACTTCAAGGATTCGAAACAATACGCGCTTGGTTACAGAAGAAGAAGTACATACCAACGGGAACAGATGCTCCAACAAAAGAATCTCTGTCtcaattaattatacaatttatacaGTATCAAGAATTAAAATTAGGAAAAAATGCTGTCGATCCACCAACAACTAAAATTCCGATGAAATGTTTTCTAGATTTTGAAATAGGTGGTGCCCTCTGTcacattttattaaacatgTACAGATATAAAGCAGGACGAGGGAAAAAGTTTGATTTTCAGaATCCAACACGAAAAGATATTCACACACAAATGCTTGTTGATATTGAAACAGCTTTAATAGATgctgaaatattaaaattaccTATTATTTATGTTCGACCAGAAGTAGACAAATCACTTGCAgcaaaagtaaaagaaattgtttcaAGTCATCAAGGTGAAATAACGGAAGATGAAGAGGGAGCAACACATGTTATTTATCCAATTGTTGATCCATTGCCAGAAGAATATGCACGACCatattttaaaagagaaaagcATGTAATGATGCATTGGTATTATTTTCCAGAATCTTATGATTCTTGGTTAGTCAATTCATTTGATTTGCCTGATTCTGTACCAGACAATCCTAGTACACCAGAAGATCGATGGCGTGTTTCGGCATCATGGATAGAAGATTTGGAACAATACAATGAATGGATGTCTGAAGAAGATTATGAGGTTGATGAacaaggaagaaaaaaaattcacaaattgaGATTAGCTGTTGAAGATTTAATGTCATCTAGTGGTGATGACAAAAGTAAAGCACGACAAGcaagtaaacaaaaaagaaaaagatcaCCGTCTCCACCACCAAAAGGTGGAAAAAGAAAGAgtggACGCTCACCAGcagtttttcaaaaaaaatcaCGAAGTGGTGATggtgatgatgaagaagattTAACCAGAGATATGGAAGATCCTCAACCAGAACCTAACATAACAGAAGTAACAAAACCGACAGCGACAAATTCTACTACAACACCAGCAACACCATTAACTAAACAGAGAGATCACGAATTGATGCCGATTAAAgGTGGTACTGTAACTGATTTAGATGAAGAAATTGAACGTGGTGAGGATTCACAGACTGGTAAAACAAGTGATAACAGTAATACACAAGAATTTCCACCAAAAGATGATCTTGAAGACAATGTAACTGAACAAACACATCATattattgttccatcatatTCAGCTTGGTTTGATTATAATTCTATTCATGTTGTTGAAAAGCGTGCAATGCCAGAATTTTTCAAtgctaaaaataaatcaaaaacacCAGAAATTTTTATGGCTTACAGaAATTTCATGATTGATACTTACCGATTAAATCCAACTGAATATTTAACAAGCACTGCTTGTCGTCGTAACTTAGCTGGTGATGTATGTGCGATAATGCGTGTCCATGCATTCCTTGAACAATGGGGACttataaattatcaaataGATACAGAATCACGCCCTACACCAATGGGACCTCCACCAACATCACATTTCCATGTGCTTAGTGATACACCATCTGGTTTACAACCAGTTAATGCCCAAAAAACACCACAACCATCTGCCTCAAAAATATTACTTGATTTAGATAAAAAggttaaagaaaaagaagagatAACACCGTCACCAGGCGGTAATGTTGGTAGTGCTAGTGCTGCTACTACTGGCACGAATGTAGTTGGTGGTGTGGGTGTGAGTGCAATTAAAACTGAAATTCCAACAAGTATAATTGATCCAAATGCACAATTTGGACTTAAATTAGATCAATATGCTAAAAAACCGGCTgctatgaaaaataaaactgctGCAAGTATGACACGAGAATGGACAGAACAGgaaacattattattgttagaAGGACTTGAAATGTTTAAAGATGATTGGAATAAAGTTTGTGAACATGTTGGTTCACGTACACAAGATGAATGTATTTTACACTTTTTACGTTTACCAATTGAGGATCCATATTTAGAAGATGATAATAGATGTTTAGGACCATTAACTTATCAACCAATACCATTTAGCAAAGCTGGTAATCCAATTATGTCAACAGTAGCATTTCTTGCATCCGTTGTTGATCCAAGAGTTGCAGCTGCTGCTGCCAAAGCAGCTATGGAAGAATTTGCTTCAATTAAgGATGAGGTACCATCATCAATAATGGACACCCACTTCAAGAATGTTGAGAAGTCTGGACAGTTTGGTAAATTTGATCCGTTCGCTGGTTTGACGACAAGCGGAATTGCTGGAACTGCACCggaaaaagaagatgaagaaggtAAATCCACAAATACcgatgaagaaaataaagacgGAACTAAAAAAGAAGCTGaAAAAACAGACACTAAAGTTGGTgataaagataataataaaacgagTGATACAACTCTAACTCCTTCAACAGATCAAACACATCAGATAAAAACcgaacaacaacagcaacttTTAGAAAACAAGGATatgaaaacaaatgaaaatttatcaGAATCTGGTACAAGTTCGCAAGGTGGATCATCAAATACATTAGCAACAACAAATGGAAAAGAGAACGGTTTAGATAATCGTAAATTAATGAATGAATCCAATTTACAAGCGGCCGCCGCAGCAGCTCTTGCATCAGCAGCAGTTAAAGCAAAACATTTAGCAGCagttgaagaaagaaaaataaaatctttagtTGCGTTACTTGTTGaaacacaaatgaaaaaattggaaattaaATTGAGACATTTTGAAGAATTAGAAACTACAAtggaaagagaaagagaagGTCTTGAATATCAAAGACAACAGCTAATTACTGAAAGACAGCAATTTCATTTGGAACAACTAAAGGCGGCTGAATTTAGAGCAAGACAACAAGCACATCAACGATTACAACAAGAACAAGGACAATGGCAgccaaatacaaatataattccTGGTACAAGTCCACTTCCTATTGCTCCACCACCTGCGATTGCACAACAAGCACCACCACCAGCAACTGCAATTGCACCACAACCAGAGGTAGCAAATCCATCAACAAGTCCAACTATACCAACAACATCACCACCAGCAGCGATAGCAGTTCCCCCTACAActccaacaacaataacaacaacaacaattgtaCCACCACCACAAGTACCATTAACGCCAACAGCAACAGTACAACAACCACCAgcatcataa
Protein Sequence
MASLGPKKDGSPNTEYFQSPESLQGFETIRAWLQKKKYIPTGTDAPTKESLSQLIIQFIQYQELKLGKNAVDPPTTKIPMKCFLDFEIGGALCHILLNMYRYKAGRGKKFDFQNPTRKDIHTQMLVDIETALIDAEILKLPIIYVRPEVDKSLAAKVKEIVSSHQGEITEDEEGATHVIYPIVDPLPEEYARPYFKREKHVMMHWYYFPESYDSWLVNSFDLPDSVPDNPSTPEDRWRVSASWIEDLEQYNEWMSEEDYEVDEQGRKKIHKLRLAVEDLMSSSGDDKSKARQASKQKRKRSPSPPPKGGKRKSGRSPAVFQKKSRSGDGDDEEDLTRDMEDPQPEPNITEVTKPTATNSTTTPATPLTKQRDHELMPIKGGTVTDLDEEIERGEDSQTGKTSDNSNTQEFPPKDDLEDNVTEQTHHIIVPSYSAWFDYNSIHVVEKRAMPEFFNAKNKSKTPEIFMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDTESRPTPMGPPPTSHFHVLSDTPSGLQPVNAQKTPQPSASKILLDLDKKVKEKEEITPSPGGNVGSASAATTGTNVVGGVGVSAIKTEIPTSIIDPNAQFGLKLDQYAKKPAAMKNKTAASMTREWTEQETLLLLEGLEMFKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDNRCLGPLTYQPIPFSKAGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFASIKDEVPSSIMDTHFKNVEKSGQFGKFDPFAGLTTSGIAGTAPEKEDEEGKSTNTDEENKDGTKKEAEKTDTKVGDKDNNKTSDTTLTPSTDQTHQIKTEQQQQLLENKDMKTNENLSESGTSSQGGSSNTLATTNGKENGLDNRKLMNESNLQAAAAAALASAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQQEQGQWQPNTNIIPGTSPLPIAPPPAIAQQAPPPATAIAPQPEVANPSTSPTIPTTSPPAAIAVPPTTPTTITTTTIVPPPQVPLTPTATVQQPPAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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