Priv010105.1
Basic Information
- Insect
- Pedicia rivosa
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963082725.1
- Location
- OY720153.1:24039810-24048043[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-15 1.8e-12 47.0 0.0 1 45 554 599 554 599 0.96 2 2 2.1e-18 2.4e-15 56.2 0.0 1 43 1013 1056 1013 1058 0.95
Sequence Information
- Coding Sequence
- atgtctGTTGAAATTCTGCAAAAAGCGTTGCACGATGCGGCAATAAAGCTGTCTGTAGACCCCGCTAAACTCATGGAAATAATGATACAAAATTTAACTacaattgatgatgatgatgatgatgatgatatggaaacaaacaaaaataataataaaaggtcAAATTCTAGTGTGCCATTTATTATGGATATTACGAATGAAGATACTGCTCCAGGAGGAAGTTTTTCAAAAAGATCAGCACTTGAAAGTAATAGTTCTTCCTCAATCGAGGAAATcagagaacagaaaaaaagtagATGGGATGAAACCAAGAATTCAATGGAGACATCCAATTACTATAATGTCTTAGACGGCAATGAATTTACAATAGCTGACGTTGATAGAAGacgaatcaaaaaaaaagaagaccaAATTAGGAAACAACAACATGAggaaaatcaaagaaaaaaacagaatgatTCGAAAAACAAGACAGAAAAAGTGATAGCACCCTCAAAAAACTCACTTAAAAAGGGAAAAGTTCCACCGATTCTTGTGGCAAATTTAAATACCAAGAAATTTCAAGAAGAAGTAAATAAGGAACATAATCCACCTCATTTCTCAATCAAAATTACCAggaataacaataaaattgttcgATGCAACGATGTTGAATCACATAAAAAAGTGTTCGAGttattaaggaaaaataagGTTGATTCTCATACATATACCccaaaagaatttaaaaaaacttcAATTCTATTAAAAGGAGTTCAATATACATTTACTCCAGATGAAATTATTGAAGatttgaaatataatatcccaaatttagatattttttctgtaaaaaaatttgaaactaGAAAGTCTGTAAGAAATGGTATCAAACTAGACAGTTTTGTAGTTCAACTCGATACCGACAATATGATAAATGAGCTGATTAAATTACAGTTTGTTTGCCATCACAGAGTTAGGTgggaaaaattaagaaaaagtgAAGTAATTCAGTGCATGAATTGCCAACGTATTGGTCATGTAGCATCCTATTGTAATTATGCATATAGGTGTGTTAAATGCAAGGAGGTGCACAACATTGGAGAATGTCCCAATATTAAAGGGGTAAATGAGCCTTGCTGTGTTAACTGTGGTGAAGCTCATCCTGCGAATTATCGTGGTTGTAatcaatttaagaaaattgagGAACTtcgaaacaaaaataaaagtttaaatagaataaaagtgCAGCagcaacaagaaaatattaggTTTGCAAGAGATTCAGCTCGAAGAATGACGCAAGGGAATATTAGTTATGCAGATATAATGTCTGGAGAATGTAGCAAACAATatcaaaataatGTTATTACCAAACTCATAACTGAGGATGATGAAGAGGTTGTAGATTTGGagaaaatagtcgaaaaaatGGGTGCACATTACAGTAAAGTTTTCGGCGATAAAGAGCCTTCACATGATCCAATTTTCGCATCTGTGATTAATAGTGCAATCAggaaatttgaaaatgaaaataaaagtaaaactgTAGCAGATGAGTTTTCGTTTCAATCAGTCTGTAATTTTGGAAAAGATAATCCTTCTGATTATCCATtggataaagaaaaatttgtaacAGCAAAACCTCGTATGTCGTCTGTAGCTGGACGAAGAAGTTATACAGAAGAAGAACTAAATAATGCCTTAAAAGATATATTATCAGGAAAATTAGGTACTAGAAGAGCGGCTGTACAATATAATATACCACGTTCAACATTACGCAATAAAGTTTATAAACTTGCAATGGAACAAAAAAGGGAAGCATCATTATTAATAATACCgcctgatgatgatgatgaaaaacaCATATCATGTCATCAAGAGAAAAAAGATGCTGAACAAGTTTTACAAAATCCATTATTAACACAAGAggatttaattcaattatcaTCAAAACAAACATCAACATCAATTGGTGGTAtgcataattttaataaaatgtatgaaaataataaaaatgaacaacaactagaaatacaaaaacaattacaaaCAATATCAACatcaatacaacaacaacagcaacaacaacatcagcagcagcagcaacaacaacaacagcagccaCAACAGCAACAACCACAAATTTCATCATTACAACCTCCACAATTACCATCACAACAGCCTCAAACAAATCCATGGTTAGACTCAAATATGTTATTACAAAGTTTATTATTGTCAAGTGGTATGAATGCAATACCTACTTTAATGCAATCAAAACCCGAAGAATTAGCAGCACTTcctgatttatttaaaaattttataatacaacaacaacaggaaTTGATTAaagaacaaatgaaaaatacagACCATTTAAATAATGGTAAACCAAATACAAATGATACAAGATTTATAATGCAAAATATGTTACAACAACATCAccatcagcaacaacaacaacatcagcagcagcagcaacagcaacaacaattacatAATAGACTAATTAAATCAGAAACACCGGAAACAGTTTCATCAGCTGACATTAATGACGATGATTCTGCTGTGATATTAAAAATTCCGTCCTTTAAACCTGTTGCTGGTTCATCGTCAAGTAAATTGCAggatcaacaacaacaacattcaCAAAATAGTACACCAATTTTATCAAGAAGTcctcaacaacaacaacataatttATCAGGTGTATCACCACCATTATTAAGACAAAATAGTAGTGATTCCCAATCACCACCATTAATGCCTggtaaaagtttatttaatttacgtGAAGCAATTGCAAAAagttttagtaaaaatttacaatcatCACCTGATAATTTAATGATGAAACAGCACACAAATTCTGATAGTATGGATCAATATAAACGTCCACCACAAATATCAGTGGTTAAAAATTTGGGTGGTACAGATATGAGCCGATTTGGTAGTAGTCCAAATATGGTTAgtacaaattcaaataataatatgcaaTCAGGTACTGGTACGGGTGGTAAAGGTACAAGACCAAAACGTGGTAAATATCGAAATTATGATCGTGATAGCCTTGTTGAAGCTGTAAAAGCTGTACAACGTGGTGAAATGTCTGTTCATAGAGCGGGAAGTTATTATGGTGTACCACATTCAACATTAgaatataaagtaaaagaacGTCATTTAATGAGACCAAGAAAACGTGAACCAAAACCACAACCATTAGATGATACAAAATCAACTGATTTAAGTGGTTCAGCAGGTACTGGTACTAGTAATTTACGTAATTTagataaaagtaaaaatttaccATCATCAACAAAGCCACCACAAAAAACACCACCATTTCCAGCAACATCACCAAATGGTCTTAAAATACCAATGTTTGATCCAACAATGTCTGCACAATTGCAGTATTCCCAATTATTTTGGTCTCATCCACCTAGTTTTACAGGTTTACCAATGGATTTTACACGTTCTCCTAGTGCCACATCACAATTCCCACCAAACGCTGAAAGTTTTTTTGCATCACAAATGATGCAAAAATTTCAAGAAGATACAACACGTctaacaaatacaaataataatacacCAAAATCATcaataagtaataataatcaaGTGAAAAGTGCAAGAGAATTAGCTGAAAGTTTATATGATAGTACCAGCGCAAATGGTTCATTATTAGATGGTATAATTCGTCAAAGTCTTGATCGTAAAAGTGATATAACACATGGAGCACTTTTAGATCAATTAGTTAAAAATAATCGATCAAATTCAGTAAGTGATGATAGTAGTAATAATGGTGGTATAAAACGTATAGGTAGTCCATTAAATTATTCACAAATGGATATAAAACGAGAAAGAACTAGTCCAGTATCATCAATTGATACTGATCGTGATTCATCAGAACGTGATATTATTTCAAAGGAATCTGTTGAAAGTTTACTTAAACATAGAGATGGCCTTACATTAAGAcatgatgaaaataatgatgatttaAATGGTTCTgatgataattataaaaaaaatatgtcagataatgaagacaatttatag
- Protein Sequence
- MSVEILQKALHDAAIKLSVDPAKLMEIMIQNLTTIDDDDDDDDMETNKNNNKRSNSSVPFIMDITNEDTAPGGSFSKRSALESNSSSSIEEIREQKKSRWDETKNSMETSNYYNVLDGNEFTIADVDRRRIKKKEDQIRKQQHEENQRKKQNDSKNKTEKVIAPSKNSLKKGKVPPILVANLNTKKFQEEVNKEHNPPHFSIKITRNNNKIVRCNDVESHKKVFELLRKNKVDSHTYTPKEFKKTSILLKGVQYTFTPDEIIEDLKYNIPNLDIFSVKKFETRKSVRNGIKLDSFVVQLDTDNMINELIKLQFVCHHRVRWEKLRKSEVIQCMNCQRIGHVASYCNYAYRCVKCKEVHNIGECPNIKGVNEPCCVNCGEAHPANYRGCNQFKKIEELRNKNKSLNRIKVQQQQENIRFARDSARRMTQGNISYADIMSGECSKQYQNNVITKLITEDDEEVVDLEKIVEKMGAHYSKVFGDKEPSHDPIFASVINSAIRKFENENKSKTVADEFSFQSVCNFGKDNPSDYPLDKEKFVTAKPRMSSVAGRRSYTEEELNNALKDILSGKLGTRRAAVQYNIPRSTLRNKVYKLAMEQKREASLLIIPPDDDDEKHISCHQEKKDAEQVLQNPLLTQEDLIQLSSKQTSTSIGGMHNFNKMYENNKNEQQLEIQKQLQTISTSIQQQQQQQHQQQQQQQQQQPQQQQPQISSLQPPQLPSQQPQTNPWLDSNMLLQSLLLSSGMNAIPTLMQSKPEELAALPDLFKNFIIQQQQELIKEQMKNTDHLNNGKPNTNDTRFIMQNMLQQHHHQQQQQHQQQQQQQQQLHNRLIKSETPETVSSADINDDDSAVILKIPSFKPVAGSSSSKLQDQQQQHSQNSTPILSRSPQQQQHNLSGVSPPLLRQNSSDSQSPPLMPGKSLFNLREAIAKSFSKNLQSSPDNLMMKQHTNSDSMDQYKRPPQISVVKNLGGTDMSRFGSSPNMVSTNSNNNMQSGTGTGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDDTKSTDLSGSAGTGTSNLRNLDKSKNLPSSTKPPQKTPPFPATSPNGLKIPMFDPTMSAQLQYSQLFWSHPPSFTGLPMDFTRSPSATSQFPPNAESFFASQMMQKFQEDTTRLTNTNNNTPKSSISNNNQVKSARELAESLYDSTSANGSLLDGIIRQSLDRKSDITHGALLDQLVKNNRSNSVSDDSSNNGGIKRIGSPLNYSQMDIKRERTSPVSSIDTDRDSSERDIISKESVESLLKHRDGLTLRHDENNDDLNGSDDNYKKNMSDNEDNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -