Priv015756.1
Basic Information
- Insect
- Pedicia rivosa
- Gene Symbol
- retn
- Assembly
- GCA_963082725.1
- Location
- OY720155.1:9004906-9026584[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-20 8.5e-17 61.6 0.0 15 89 38 110 29 110 0.93
Sequence Information
- Coding Sequence
- ATGAGATTACCTTCTTTTTTGGATATGAGAACTTCTGGTGAAGTTGATGATGATGCTGATGTAGAAGAAGATGTTGTTGATGATGCCCAGGAAGTAAAATGTGTTAAAATAAGTGAAGGTACACCAATAAATCGTTTACCAATAATGGCAAAATCAGTTCTGGATTTATATGAACTTTATAATTTAGTAATTGCACGTGGTGGTCTTGTTGatgttattaataaaaaattatggcaagaaataataaaaggacTTCATTTACCATCAAGTATAACAAGTGCAGCATTTACACTTAGAACACaGtacatgaaatatttatatcctTACGaatgtgaaaagaaaaatttaagtaCACCGGCTGAATTACAAGCGGCAATTGATGGTAATCGACGCGAAGGACGCCGATCAAGTTATGGACAATTCGATACACAAATGCAAGGACAACTACAAAtgTCACAAGTTTCACATCAAAGATCACCAGTACCATCAAGTATGCAACAAATGTCACCATTATCACTAGTAACGCACGGAAACACACCATCAGCACATCATCGTTTAATGGGTGGACAAATGACTAGTTTAGTACCACATGAAATTGAACAACGTATGATGGagtatataaaattaattcacaaTTCAAAGGAGACACGACGTAATAATGAAATGTTTTCTGGTTCACAAAGTCCTGAAATATCAACAAGAGAAGCATTAAATGCATTAGAAATGTCAAGGGTTGCATTATGGTCAATgtacaataataatacaagCCCACCAACTTCTATAAATACTAGTCCACCGGGAAATGAACCACAACGCGAGGCTTTGAATCTTTCTGAATCACCACCACATCCACCAATAAAACGTGAACGTGAACATCCAACAGATTTTTCTGATCGTGATTTTGTACAACCACCAGCTAAAAGAGGTTTAACAATAATAccacaacaacagcaacagcaaccaCATCCGTTAAATTCATCGCTGGACGAGAGGGATGATAGATCAAATACACCAACAAATCAACATGATAATTTAATAACTGAACgtaataatatacaaaacaataataataataataacaatataacAAATTCGCATCATCAAAATGGTacagataataataatagtacaTCAGTGATAAATGGAATGCAATTTAAGATAACTAGTCGAgGAAACGCATCAACAGGAGATCAAAAATTAGTCGTTGCAATGGAATTTAATGGTGTCCTTTATGAAGGTGTTTTATTTGCAAATTCATcaacaacacaaacaaattcaacaacaccgacaccaacaacaataccaacatcatcaacaccgtcatcaacattaaataatacatcatcctcatcatcatcatcattgtcATCAactaataatacaaataatattgttaataattcaattgatgAAAGAACAAATCGTATTTCACATCCTTTAGTATCTTCATAA
- Protein Sequence
- MRLPSFLDMRTSGEVDDDADVEEDVVDDAQEVKCVKISEGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDTQMQGQLQMSQVSHQRSPVPSSMQQMSPLSLVTHGNTPSAHHRLMGGQMTSLVPHEIEQRMMEYIKLIHNSKETRRNNEMFSGSQSPEISTREALNALEMSRVALWSMYNNNTSPPTSINTSPPGNEPQREALNLSESPPHPPIKREREHPTDFSDRDFVQPPAKRGLTIIPQQQQQQPHPLNSSLDERDDRSNTPTNQHDNLITERNNIQNNNNNNNNITNSHHQNGTDNNNSTSVINGMQFKITSRGNASTGDQKLVVAMEFNGVLYEGVLFANSSTTQTNSTTPTPTTIPTSSTPSSTLNNTSSSSSSSLSSTNNTNNIVNNSIDERTNRISHPLVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -