Priv016497.1
Basic Information
- Insect
- Pedicia rivosa
- Gene Symbol
- grh
- Assembly
- GCA_963082725.1
- Location
- OY720155.1:20839674-20900916[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.55 6.1e+03 -3.5 0.1 46 94 234 287 229 294 0.58 2 3 0.57 6.2e+03 -3.5 0.0 22 49 749 776 744 777 0.84 3 3 4.7e-63 5.1e-59 199.5 0.3 25 221 827 1018 812 1020 0.93
Sequence Information
- Coding Sequence
- atgtcATCGCCATCGTCAATTGAGTCACCACTACAGCAATTATCACCACACAACAATAATATACCATCAAATCCGTCAAGTCCACCACCTGAACTTGTTACAATGACAAATGTAAATGTATTAGATTTGCATAAAGAATTTAATGATAAAGATGGTACAGTTTATGTTTATGGTGGTGGTGGCGGTGGTATTGTTGGTGGTGGACATAAAATGATGACGTCTACAATATCACATGATTGcagtaatattaaaattcaaggTGATCAATTAGTTAATACACGTTTAATTGGACATAATAACagtaatagtaataataataataacaataataataacaataataataataacaataataataataacaataatattaataataacaataataataatactggACTTATACAAACTGTTGGTGATTGTAAATCAGAAGATTtgtcatcatcaacaacatcaatgacaaaaattgaattatccAATGATCAACTATATCGGATTGTTGAAGGTAATcaaattgtaacaaaattaataacatcAAATGGTGATACACAAATAATAAGTcgtgaaataataaatggtGAACATCATATATTAACACGTAATGAAAATGGTGATCATGTTATCGCTAGAATTGTTAAtacagaaacaacaaaaattggtaatggtatttatacaaaatatgttGAAACAAATGGtgaagaaaattcaaattataataattcagGTGATCATGAACATATAACAACATCAGTATTACATTATGGTGGTAATAATAGTGATAAAGATGTTTATAATTCTGGTAATATGAAAACATCAATTGTTGAAATACCAACAGATAATAATGATATAAAATCAGAAATTGTACAAATATATGATGATGCTGatggtaaagaaaaaattatttatactcATGGTGATACAAAAGATCTTatttatgaaacaaaacaagaaatatatgatgatgacaaaaatgaaatttttactgATGATAAATTATATGAGAAACCACAAATTGATCTTATATATGATGATGGTAATAAAACTGTTATATATACAACAACATCTGATCAAAAAGGATTGGAAATTTATTCAGGAAATGATTTAGGACTTGTTGGTGAAACACAAGTTGTTGTACAAGGTGGATTACAGTATACTCAACAGGCTGGAACTCAAGGTGAAACAGTACTAGTTGTATCTGAACTTGTTGACAGTGATATAAATGGACAGATTCACAGACGAAGAACAATTTCAAATCCTGAATCACCTATGTCTGTTAGTACCTCAGATCAAAATAATGATGGAATTGGACATGTTACGACAGCAACGACGACACAATCTGGTTATCTACCACCACGaTATTTTGAACATCCACTTACAGCCGCAACATCAGCaatgttaaatatttcagGAAATGGTACAAATTCAGAGGAGGATACAAGCAATAATACAGGAAGTGTCAATTTAGGTACATTAGGTACACCACATCAGGTGCACCAAGTTCATAATGCAAATGGTAGTACATCTTTTGtatatgaatattataaagtGCAAGATAAAGATGGACTTCAATGGAgTACCCCcactacaaaaataaatggacAAACCACGCCTTTAGATGTATCTGGCCTATCACAAAATGAAATACAAGGTCTACTACTTGGTTCACACCCATcatcacaaaatataaatgtcaAACGTGAGCCCGAAGATTTGCGGAAAGATCCGAAATGTCAGCGAGGACAAAAAgTTCTTGTAGTACAAACACCGTCGCCCACATTACAGATTAAAGAACAACCCCCTAGCCCTGGAAGTCCATCAGCTGAAGCAATGTACGCCGCCACTGGCGGCACGCAGATTTATCTGCAGGGTCCATCACATCAAACAagttcaacaacaacaacatctggatcaaatataaatacaaatacaccAAGTCCTGGACCATATGTATCAGATCAATATGGAATGTATACGACAAGATTAACTCCAAGTGGTTCAACATTTATATCAGAACCATATTACCGTGAATATTTTTCTGGTGAAGGATATGCACCAACCCGTTCAATATATAACAATGAATCAGATGGACCACAAGCAGTAACTACATATGAAGGACGTTTTACATCACATCCAAAAGGTGGTCCCGTTTATGCAAAAACAGTAACAGCAGCTGGTTTAACTGTTGATTTACCAAGTCCTGATTCTGGTATTGGAGCTGATGCAATAACACCGAGGgatcaaaataatatacaacAGTCATTTGATTATACTGAGCTGTGTCAAGCACCAACATTGCTGGATGCGAATACAGGAAATATTCCAGTATCTGTAAGTAGTATACAACGCTCAGTGAGTGTACATGGTGGTCAAAATAGTCCAACAACGTCTCTTAATCACCAGCCAACATCTAGATCCAGACCGTGGCATGATTTTGGACGACAGAACGATGCTGACAAAGTTCAAATACCAAAAATattcACAAGTGTAGGATTCAGATATCATTTAGAAAGTCCTATAAGTTCATCACAACGTAGAGAAGACGATCGGATAACATATATTAATAAAGGACAATTTTATGGAATTACATTGGAATATGTACCTGATCCTGATAAACcattaaaaaatcaaacagTTAAGAGTGTGATAATGCTTATGTTTCGTGAAGAAAAAAGTCCTGAAGATGAGATCAAAGCATGGCAATTCTGGCATAGCCGACAGCATTCTGTAAAACAACGAATACTCGACGCAGatacaAAGAATTCAGTTGGTTTAGTTGGTTGTATTGAGGAAGTTTCACATAACGCTATTGCTGTTTATTGGAATCCACTGGAAAGTTCGGCCAAGATAAATATTGCTGTTCAATGTTTGAGTACGGATTTTAGTAGTCAAAAAGGAGTTAAGGGCCTTCCCCTTCATGTTCAAATAGATACATTTGAGGATCATAGAGACAGCCAAATATATCATCGAGGATATTGCCAGATAAAAGTATTTTGTGATAagGGTGCTGAAAGAAAAACACGTGATGAAGAAAGAAGAGctgctaaaagaaaaatgacagCTActggtagaaaaaaattagatgaATTATATCATCCAGTTACAGACAGAtctgaattttatacaatGCAAGATTTAGCTAAACCACCTGTATTATTTTCACCTGCCGAAGATATTgataaatTATCTGGAATGGAATTATCAGGATTTTATGGTCATGATACAGATTCATTATCTGGTACTGCTGATGGAAGTATAAAAGGATCATCACCATTTTTACTACATGCTGCTAGTAAACCAACAACGCcaacattaaaatttcataatcaTTTCCCACCGGATGTACCTACTGAGAAAAAGGATCATCTATTAGACACAACAACAATGGTACAAAATTCAATGTCTGAATTTGGTCCACCAATAAAACGTAATAGAATGTCACCGCCATTAAATGAAAGAGTTATGCTGTATGTAAGACAAGAAAATGAAGATGTTTATACACCGCTTCATGTTGTACCACCAACAACAATTGGACTACTTAATGCGattgaaaataaatacaaaatctCAACAACGAGTATACATAGCATATAccgaaaaaataagaaaggaattacGGCGAAAATTGATGATGATATGCTGTCGTATTACTGTAATgaagatatatttttattggagGTGAGGCATGTTGAAGAGGACTTATTCGATATAACCCTGACAGAACTTCCAGATCatcattga
- Protein Sequence
- MSSPSSIESPLQQLSPHNNNIPSNPSSPPPELVTMTNVNVLDLHKEFNDKDGTVYVYGGGGGGIVGGGHKMMTSTISHDCSNIKIQGDQLVNTRLIGHNNSNSNNNNNNNNNNNNNNNNNNNNNINNNNNNNTGLIQTVGDCKSEDLSSSTTSMTKIELSNDQLYRIVEGNQIVTKLITSNGDTQIISREIINGEHHILTRNENGDHVIARIVNTETTKIGNGIYTKYVETNGEENSNYNNSGDHEHITTSVLHYGGNNSDKDVYNSGNMKTSIVEIPTDNNDIKSEIVQIYDDADGKEKIIYTHGDTKDLIYETKQEIYDDDKNEIFTDDKLYEKPQIDLIYDDGNKTVIYTTTSDQKGLEIYSGNDLGLVGETQVVVQGGLQYTQQAGTQGETVLVVSELVDSDINGQIHRRRTISNPESPMSVSTSDQNNDGIGHVTTATTTQSGYLPPRYFEHPLTAATSAMLNISGNGTNSEEDTSNNTGSVNLGTLGTPHQVHQVHNANGSTSFVYEYYKVQDKDGLQWSTPTTKINGQTTPLDVSGLSQNEIQGLLLGSHPSSQNINVKREPEDLRKDPKCQRGQKVLVVQTPSPTLQIKEQPPSPGSPSAEAMYAATGGTQIYLQGPSHQTSSTTTTSGSNINTNTPSPGPYVSDQYGMYTTRLTPSGSTFISEPYYREYFSGEGYAPTRSIYNNESDGPQAVTTYEGRFTSHPKGGPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQAPTLLDANTGNIPVSVSSIQRSVSVHGGQNSPTTSLNHQPTSRSRPWHDFGRQNDADKVQIPKIFTSVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVPDPDKPLKNQTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDHRDSQIYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYTMQDLAKPPVLFSPAEDIDKLSGMELSGFYGHDTDSLSGTADGSIKGSSPFLLHAASKPTTPTLKFHNHFPPDVPTEKKDHLLDTTTMVQNSMSEFGPPIKRNRMSPPLNERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTTSIHSIYRKNKKGITAKIDDDMLSYYCNEDIFLLEVRHVEEDLFDITLTELPDHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -