Pder012302.2
Basic Information
- Insect
- Pediacus dermestoides
- Gene Symbol
- stc
- Assembly
- GCA_963942485.1
- Location
- OZ012627.1:30680990-30684735[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.73 6e+03 -2.2 0.4 4 10 403 409 403 409 0.93 2 14 0.00013 1.1 9.8 15.4 3 18 417 432 416 433 0.93 3 14 2.2e-09 1.8e-05 25.1 13.4 1 18 469 486 469 487 0.97 4 14 3 2.5e+04 -5.0 1.6 9 13 493 497 492 498 0.69 5 14 1.4e-09 1.2e-05 25.7 12.1 1 19 527 545 527 545 0.98 6 14 0.0033 27 5.3 17.6 4 19 592 607 585 607 0.87 7 14 2 1.6e+04 -3.6 2.0 5 10 636 641 636 641 0.93 8 14 0.0072 59 4.3 9.0 1 11 647 657 647 658 0.96 9 14 2.2 1.8e+04 -3.7 0.8 4 10 662 668 661 668 0.69 10 14 7.9e-09 6.4e-05 23.3 12.6 1 18 674 691 674 692 0.97 11 14 1.9 1.5e+04 -3.5 0.8 6 10 721 725 720 725 0.85 12 14 0.00085 6.9 7.2 13.6 1 19 731 748 731 748 0.86 13 14 1.2e-06 0.01 16.3 20.0 1 19 784 803 784 806 0.97 14 14 0.0042 34 5.0 16.1 1 17 813 828 813 832 0.92
Sequence Information
- Coding Sequence
- ATGATTAATTCCAGTGTCCGGTTTATGTCTACATGGGACATTACACCCAATAATAATCAACCATGtcgtaacaatttttataccaACGCCGGAATGTCCTACTACAATAATTCCTCAAGTTACTATGCGGCTTCAGCTTCCGGCCCCGAGGTGCAAAACTTGTTTCCAAATAGTGCTCAAGGGTCCTACAATGAGGACTCACAAAGATCTCTAGTGCACAATTCAACATTGGAGCCAAATGCTCCGGAGTTTAGACCGTTAAATCAGGCGGAGTCCAGTAGCAATCAAGGGGCGATCAAGAAGAAACCACAAAATCAACAAAACTATAACAGTAGGAGGAACAACAGGTATGGAAGTGGGcggatttttaataattctagAGATCAAACCAGAACGGACAGGAGAAACGATGATCGAAATGACGAAGAAGTGGAGAATGTTAGCTATTTTAGTAATTATAAACACGATTATGGTTCGTCATCAGTTGATAATCCCAATTCTAACGCAAGGGTAAAGGAACATACTAGAAAACAATATCATAAAAAAGGCGTAGATTATCAAAACGAAAAGTACAGCAATAAAAGTTATGATAATAGAACGGAATATAGCGACGCTTCTGATGGAAATAGACAATCTGTTGgcagaaattttaaaagtaaaaattacgaTAAATCCaatcatttttatgaaaaatcctACCATAGAAGCTCGAATCATTACGAGAGAAATGATACCGAGGGTGGTGACCGGTATAGAAATAGCAATCAAAAGTTTTACAAAGGGGAATATAGAGGTGGTTCTGGTAAATATTATGAAGGAAAAAGACAGCCGGACAGTGATAACTGGCGAAAGCCGAGGGATGCTACCAAAATGGACAAGAATCCTAAAGAGCTTAGTGAATcacaaagtaataaaaaatTGGACGCAGCATCTCAAAAAGAACGACTAGAGCAAATGCTCAACCGCCGTCAACTGGAATGCCTAGTATGttatgagaaaataaaaaattcgcacAAAGTCTGGTCCTGTGAACAATGTTACAACATATTCCACCTGAATTGCACAATTGTTTGGGCAAAAATGTCCAAACCAGAAAACAATTGGCGATGTCCAATATGTCAATACATGTGCACAAAAATCCCGAACCAATACAAATGCTACTGTGGCAAAACCATCGACCCCAAACTGGATGCCGGCATAATCCCTCATAGTTGTGGCGAAATGTGCCTAAGAAAAGGCCGAACTTGTGAACATAAATGTACTTTACAATGCCATCCTGGTCCTTGTCCGGATTGCAATGTGATGGTGGCCAAACGTTGCGGATGTGGTGCAACTCAAGCAACAATTAAATGTTGCTCTGATTTGGACATTGTCTGTGATGCAACTTGTAATAAAACATTAGAATGTGGGCTACACACATGTAAAGCAAAATGCCATTCGGGACCTTGTGCCCCTTGCGAAAAAACATTAACACAAGAGTGTCACTGTGGAAAAGTCGGAAGAAGAATTGCTTGCACTAAGGAAATTAACGGCGCTACCACTTACTCTTGTGGGGAGGTATGCGGAAAACTCTTAACTTGTTCCAATCACAAATGCGAGAGTATATGTCACGAGGGACCTTGCGATGTTTGTCCGATGGACATAACCATTGTCAAGTCGTGTCCATGTGGGAAAAGCCAGTTGGACAAACCGAGAACTTCCTGTTTGGACCCAGTACCATGTTGCGATAAAATTTGTGGGAAAGCGTTGCAATGTGGCCAGCCAAGTTGTCCACATGTTTGTAAGACAAAATGTCACATCGGAGAATGCCCGCCTTGTCGTTTAACTACTTTTGTTAGGTGTCGGTGTGGACATATGGACAAGGAGTTGCCCTGTCAACAGTTAACGAGTAAAGCAGATGATGCGAGATGCGAAAAGAAATGTGTTAAGAAACGACTTTGTGGTAAACATCGCTGCAACCAACGCTGTTGCATCGAACTGGAGCACTTTTGCCCGCTTCCATGCAACCACCAGCTGTCCTGTGGCCAACATCGGTGTGTTCTTACATGCCACAGTGGGCGATGTCCTCCCTGCTTAGAGACCAGCTTCGAAGAACTGTACTGTGAATGCGGAGCAAGCGTTTTATATCCACCAATACCATGCGGTACTAAACCACCAAGTTGCAATAAACCGTGCTCAAGACAACGTCCTTGTGGACATGAAATTAACCATTCGTGTCACACTGGACCTTGTCCACCTTGTACAGTTTTGTGCAAACGTTGGTGTTATGGCCATCACCAACAAAGATCGACTATTCCTTGTCATCAAGAGGAGTTTAGTTGTGGACTTCCGTGTGATAAGAAAATGTCTTGTGGAAGGCATAAGTGTACGAAACCTTGTCATGGAGGCGAGTGTCCACTGCCTTGCAAACAGCCGTGTACTGTTGCAAGACAGCTTTGTGGTCATCCTTGTGGACGACCATGTCATGATTCACCGTGTCCTCCAAGTGTTTGCAAGTTTAATGTTCCGCTAACTTGTCAGTGTGGCTTACAGAAGAGTTCAAAACCTTGCGTGGAAGTCGCAGACGAGTTTAAGTATATTGAAATGGCGCAGCTTCAGGAAAAGATGGGGGATCTTGCCAGGGATATGACAGTGGATCTTACAGACATCATCAAGCAGAAAAAATCTACGGTCTTAAAAAGTTTAGAGTGTACTGAGGAATGCCGTGTTTTGGAACGCAACCGCAGACTAGCCATCGGCCTTCAAATTCGCAACCCCGACTTGAGCCAAAAACTCACACCGAGATACTCGGACTTTATGAGAAACTGGGCGAAGAAAGATCCGCATTTTTGTCAGAAAGTGCACTACAAACTCTCAGATTTGGTGCAATTATCCAAGCAAAGCAAGCAGAAAAGTAGATCGTATTCGTTTGAGTCGATGAATCGCGACAAACGACATTTTATTCATGAATATTGCGAACATTTCGGATGTGAAAGTGCGGCTTATGACATGGAGCCAAATCGAAATATTGTGGCCACTGCCAATAAGGATAAGTCTTGGTTACCCAGTATGAGTTTATTGGAGGTGATTCAGAGGGAGAATGGACAAAGAAAAGTGCCTGGGCCTGTGCTAAGCAAAAGTTCAACTACGAAGAATGAAACTGTTAGTTTGAAGTTACCGGGGAGAGGGCAGAGGGCCAGTACACCACCTGGCGAACCAACAGATCCATTCGATGACTAG
- Protein Sequence
- MINSSVRFMSTWDITPNNNQPCRNNFYTNAGMSYYNNSSSYYAASASGPEVQNLFPNSAQGSYNEDSQRSLVHNSTLEPNAPEFRPLNQAESSSNQGAIKKKPQNQQNYNSRRNNRYGSGRIFNNSRDQTRTDRRNDDRNDEEVENVSYFSNYKHDYGSSSVDNPNSNARVKEHTRKQYHKKGVDYQNEKYSNKSYDNRTEYSDASDGNRQSVGRNFKSKNYDKSNHFYEKSYHRSSNHYERNDTEGGDRYRNSNQKFYKGEYRGGSGKYYEGKRQPDSDNWRKPRDATKMDKNPKELSESQSNKKLDAASQKERLEQMLNRRQLECLVCYEKIKNSHKVWSCEQCYNIFHLNCTIVWAKMSKPENNWRCPICQYMCTKIPNQYKCYCGKTIDPKLDAGIIPHSCGEMCLRKGRTCEHKCTLQCHPGPCPDCNVMVAKRCGCGATQATIKCCSDLDIVCDATCNKTLECGLHTCKAKCHSGPCAPCEKTLTQECHCGKVGRRIACTKEINGATTYSCGEVCGKLLTCSNHKCESICHEGPCDVCPMDITIVKSCPCGKSQLDKPRTSCLDPVPCCDKICGKALQCGQPSCPHVCKTKCHIGECPPCRLTTFVRCRCGHMDKELPCQQLTSKADDARCEKKCVKKRLCGKHRCNQRCCIELEHFCPLPCNHQLSCGQHRCVLTCHSGRCPPCLETSFEELYCECGASVLYPPIPCGTKPPSCNKPCSRQRPCGHEINHSCHTGPCPPCTVLCKRWCYGHHQQRSTIPCHQEEFSCGLPCDKKMSCGRHKCTKPCHGGECPLPCKQPCTVARQLCGHPCGRPCHDSPCPPSVCKFNVPLTCQCGLQKSSKPCVEVADEFKYIEMAQLQEKMGDLARDMTVDLTDIIKQKKSTVLKSLECTEECRVLERNRRLAIGLQIRNPDLSQKLTPRYSDFMRNWAKKDPHFCQKVHYKLSDLVQLSKQSKQKSRSYSFESMNRDKRHFIHEYCEHFGCESAAYDMEPNRNIVATANKDKSWLPSMSLLEVIQRENGQRKVPGPVLSKSSTTKNETVSLKLPGRGQRASTPPGEPTDPFDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -