Pder005572.1
Basic Information
- Insect
- Pediacus dermestoides
- Gene Symbol
- nfxl1
- Assembly
- GCA_963942485.1
- Location
- OZ012625.1:62374189-62378094[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 3 2.5e+04 -7.8 5.6 15 19 168 172 167 172 0.81 2 17 0.2 1.6e+03 -0.3 0.4 4 10 203 209 202 209 0.95 3 17 4.6e-08 0.00037 20.9 17.0 1 19 217 234 217 234 0.99 4 17 8.7e-08 0.00071 20.0 13.2 1 19 270 288 264 288 0.86 5 17 2.8 2.3e+04 -4.0 1.0 6 10 313 317 312 317 0.88 6 17 3.2e-10 2.6e-06 27.7 8.5 1 18 323 340 323 341 0.98 7 17 9.4e-05 0.77 10.3 10.6 1 18 376 393 376 394 0.96 8 17 0.45 3.7e+03 -1.5 0.5 1 4 403 406 403 407 0.89 9 17 8.4e-05 0.68 10.4 17.1 1 18 428 445 428 446 0.94 10 17 3.6e-10 2.9e-06 27.6 10.8 1 19 455 473 455 473 0.98 11 17 0.00028 2.3 8.7 6.2 9 19 521 531 519 531 0.89 12 17 0.11 9.4e+02 0.4 5.0 4 12 543 551 541 551 0.89 13 17 3 2.5e+04 -6.9 4.5 14 18 579 583 579 583 0.86 14 17 0.16 1.3e+03 -0.0 7.7 1 11 620 630 610 631 0.81 15 17 3.6e-06 0.03 14.8 16.6 3 19 661 677 660 677 0.94 16 17 2.1e-07 0.0018 18.7 9.6 1 16 720 734 720 740 0.93 17 17 2.4 2e+04 -3.8 0.8 6 10 770 774 769 774 0.87
Sequence Information
- Coding Sequence
- ATGAACAAACAAAAGGCAGTAAATCCTTGGAATCGGAACGAACCACCCAGAAAAAGCTACGCAAAACAACAAAATGGTCTTCATAGTCAAAGAAATGCACCAACACCTGGTGAAGCTAAATTCAAAGAAGCCCAACTTAAAATACAAGCAGTTGCTCAAAAACATGTAAAAGATTATGAATCATCTTCTGATGAGGAGGAAATATTGGaatctaataatttaatacttgatattttgaaaaattatacggCTACTGGAGCTGGAACTGAACAGTTGGGCCGTACGCAGAAAATATTAGAAGAATCATTCCTATCAGGTGCTGCTACTTGCCTTATTTGTATTTCAAAGGTTAAACGAGGAGATGAGATATGGAGCTGTACAAACTGTTACGCTTTCTTCCACATTACTTGCATTCAAAGATGGTCCAAAGATACAATAACACAAAGAAAACAAGCCTTAGAAAGTCCGATATTATTACAACAGAAGAAAGTTTGTTGGTGCTGCCCCAAATGTAGACAAGAGTACACTCCAGATGATGTGCCCACGAAGTACGTGTGCTTCTGTAAGAAAACAGTTAATCCTAAAGCGCAACCATTTTTGGTGCCTCATTCTTGTGGGGAAATTTGCAAAAAGGACTTGGTGCCGGTTTGTGGCCATAAATGTTTGCTGTTATGTCATCCAgGACCTTGTCCACCTTGTCCAGTAACTGTAAGTGTAACTTGCTACTGTAAATCGCAACCACCACGCACTCAGCGATGCAACAACAAAGATTGGTCTTGTGGAAATCGTTGTGGGAAACTTTTGTCGTGTGAGAAGCACACATGTTCAGACTCTTGTCATGCTGGTGATTGTCCGCCGTGTTCGAAAAAAAGTATACAGAGGTGTATGTGCAAATCGCTACAGAAACTACGAGATTGTGCTTCACCTCTTTGGCAGTGTAATAAAatttgcaATAAGCCTTTAGATTGTGGTATTCACACTTGCCAGGAGGTTTGTCATGCTGGTGTTTGCGATGTGTGTGCGTTAACCAAACCACGAACATGTCCATGCGGCAAAACCAAATATCAACTACCTTGTACTGAAGAAACCCCTACTTGTCTAGATACTTGTGAAAAGATTCTGGAATGTGGTGTACATGCTTGCAACCAAAGGTGCCACAAAGAAAAATGTGGATTGTGTCTAGAAATAGTGGAAAAATGTTGTCGATGTGGCCAACATTCAAAACAAATTCATTGCTCCAAGCCCTATCTATGCGAGGCGAAATGCAAAAGCATGAAGGACTGCAACAAACATCCGTGCAATCGAAAGTGTTGTGATGGAAACTGCCCACCATGCGAAAAACCTTGCGGAAGAACCCTGAGTTGTGGCAATCACAAATGCACTTCGGTTTGTCATAGAGGCCTCTGTTACCCTTGCAGCCAAACCGAAATTGTTTCTTGTCGATGTGGTAACACTACAATCAGTGTCCCATGTGGCAGAAAGCATAAAACGAAACCGCCGAAATGTACCAAATCATGCCCttttttaccAGATTGTCACCATGAGAAACGAGAAAAGCATCGCTGCCATTTCGGCGATTGTCCACCATGTAAACAAATTTGCACCAAGAGTCGGCCGGCTTGTCCTCATTTGTGCCCAGCTCCATGTCATTcatatgttttaattaaaatcgagGGACAAAAAGCCTCTATGCCCTGGGAACAAACTAGTCCGTTGTTGGAAAGAAGAGCCTTACCTTGCCCAGATTGTATTGTTCCAGTGCCTATTACATGCTTAGGTCTTCATGAAACGGTAGACTGGCCATGTCACTTGGCGACACAGACTAGTTGCGGTAGACCCTGTGGAAGATTATTGTCATGTGAGAATCACTATTGTCAGTTGCAGTGTCATTTGGTCGAAGAGCCTTCCGGAGAAAATAAGGCTGGCAAAAACTGTGAAGAATGCAGCAGCGACTGCATGAAATCAAGACCAGATGGTTGCCAACATTCCTGTCCTAAACCATGTCATCTGGGAGATTGTCCCCCTTGCAAACAGATGCTTAGAATTAAATGTCATTGTAGCCTGAACCAACCATACGTAGCCTGCAATGAATGGCAAAACTTACCTAAACGAGAACTACTCCAAAGCTGCGGAAATCAATGCccgaaaaattACCCATGTGGCCATCGCTGCAAATCCATCTGTCATTCGGGATCCTGTCCAAATGCTGATCTCTGCAAGAAGAAAGTGAAAGTGACTTGCAAATGTAAACGACTAAAGAAGGAGTTTCAATGTGAAGTTGTGAGGAATAAAAGTGCGTATGTTGAATGCGATCAAATTTGCCAGGAGAAATTAGAAGATGAAAGAAAAGTGAGAGAAGCGGCTgataaacaaagaaaaatggAAGAGGAGATTAGAAATAAGAAGGAATTGGAGAGGTACCAAAAGAAATTTGAGGGAAAGAAACGAAACAGGGAACGAAGGCATTTTGAGGAGGAGAATGATACGGGGTTGCTTgtcaaatacaaatttatctTGCTCACTATGTTTGTACTGTTTATTGCTGTggcagtttattttttattacattag
- Protein Sequence
- MNKQKAVNPWNRNEPPRKSYAKQQNGLHSQRNAPTPGEAKFKEAQLKIQAVAQKHVKDYESSSDEEEILESNNLILDILKNYTATGAGTEQLGRTQKILEESFLSGAATCLICISKVKRGDEIWSCTNCYAFFHITCIQRWSKDTITQRKQALESPILLQQKKVCWCCPKCRQEYTPDDVPTKYVCFCKKTVNPKAQPFLVPHSCGEICKKDLVPVCGHKCLLLCHPGPCPPCPVTVSVTCYCKSQPPRTQRCNNKDWSCGNRCGKLLSCEKHTCSDSCHAGDCPPCSKKSIQRCMCKSLQKLRDCASPLWQCNKICNKPLDCGIHTCQEVCHAGVCDVCALTKPRTCPCGKTKYQLPCTEETPTCLDTCEKILECGVHACNQRCHKEKCGLCLEIVEKCCRCGQHSKQIHCSKPYLCEAKCKSMKDCNKHPCNRKCCDGNCPPCEKPCGRTLSCGNHKCTSVCHRGLCYPCSQTEIVSCRCGNTTISVPCGRKHKTKPPKCTKSCPFLPDCHHEKREKHRCHFGDCPPCKQICTKSRPACPHLCPAPCHSYVLIKIEGQKASMPWEQTSPLLERRALPCPDCIVPVPITCLGLHETVDWPCHLATQTSCGRPCGRLLSCENHYCQLQCHLVEEPSGENKAGKNCEECSSDCMKSRPDGCQHSCPKPCHLGDCPPCKQMLRIKCHCSLNQPYVACNEWQNLPKRELLQSCGNQCPKNYPCGHRCKSICHSGSCPNADLCKKKVKVTCKCKRLKKEFQCEVVRNKSAYVECDQICQEKLEDERKVREAADKQRKMEEEIRNKKELERYQKKFEGKKRNRERRHFEEENDTGLLVKYKFILLTMFVLFIAVAVYFLLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -