Basic Information

Insect: Pediacus dermestoides
Gene Symbol: RREB1
Assembly: GCA_963942485.1
Location: OZ012629.1:14068136-14073789[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.3e-05 0.0021 18.8 0.8 1 23 71 93 71 93 0.99

2 16 0.00011 0.01 16.7 0.2 1 23 106 128 106 128 0.97

3 16 5.4e-05 0.0049 17.7 6.4 1 23 134 156 134 156 0.98

4 16 0.27 25 6.0 0.1 1 23 220 244 220 244 0.87

5 16 0.00037 0.034 15.0 0.9 2 23 250 272 250 272 0.97

6 16 1.6 1.4e+02 3.6 0.9 1 19 319 337 319 340 0.76

7 16 0.064 5.9 8.0 0.1 1 23 456 478 456 478 0.96

8 16 0.00016 0.015 16.2 2.3 1 23 487 509 487 509 0.98

9 16 0.00074 0.068 14.1 3.1 1 23 515 538 515 538 0.97

10 16 0.00044 0.04 14.8 3.0 1 23 894 917 894 917 0.97

11 16 0.00044 0.04 14.8 0.4 2 23 1127 1148 1126 1148 0.97

12 16 0.0046 0.42 11.6 4.1 1 23 1154 1177 1154 1177 0.97

13 16 0.011 1 10.4 2.5 1 23 1207 1231 1207 1231 0.92

14 16 0.05 4.6 8.3 1.4 1 23 1287 1310 1287 1310 0.93

15 16 0.015 1.4 10.0 0.4 3 23 1358 1378 1356 1378 0.93

16 16 0.0067 0.61 11.1 5.9 1 23 1384 1406 1384 1406 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.3e-05	0.0021	18.8	0.8	1	23	71	93	71	93	0.99
2	16	0.00011	0.01	16.7	0.2	1	23	106	128	106	128	0.97
3	16	5.4e-05	0.0049	17.7	6.4	1	23	134	156	134	156	0.98
4	16	0.27	25	6.0	0.1	1	23	220	244	220	244	0.87
5	16	0.00037	0.034	15.0	0.9	2	23	250	272	250	272	0.97
6	16	1.6	1.4e+02	3.6	0.9	1	19	319	337	319	340	0.76
7	16	0.064	5.9	8.0	0.1	1	23	456	478	456	478	0.96
8	16	0.00016	0.015	16.2	2.3	1	23	487	509	487	509	0.98
9	16	0.00074	0.068	14.1	3.1	1	23	515	538	515	538	0.97
10	16	0.00044	0.04	14.8	3.0	1	23	894	917	894	917	0.97
11	16	0.00044	0.04	14.8	0.4	2	23	1127	1148	1126	1148	0.97
12	16	0.0046	0.42	11.6	4.1	1	23	1154	1177	1154	1177	0.97
13	16	0.011	1	10.4	2.5	1	23	1207	1231	1207	1231	0.92
14	16	0.05	4.6	8.3	1.4	1	23	1287	1310	1287	1310	0.93
15	16	0.015	1.4	10.0	0.4	3	23	1358	1378	1356	1378	0.93
16	16	0.0067	0.61	11.1	5.9	1	23	1384	1406	1384	1406	0.98

Sequence Information

Coding Sequence: ATGCAAGGGGTGGTTTTCATGCCTGAAAATCCGCAACAGGGCTCGCCGCCCCCCCAAAACACCACAGTCACCGACATGGACATATCCCCCAAAGACATCCGAAGCAACCAAAGCGACTCAGGCATCTTCtcgacaaccaccaacaccacCGCCGACCAAACCAACTGCGACACCGATAATCGCAGCGACTGCAGCTCCCCCGAACGCAAATACGTTTGTCCAATTTGCGACACCATGCTAACTTCACAACACGATTTCACCCTCCATATCCGATCGCACAACAACGAATCCGAGGATCAGGACAACGAAAAAGGCTACATTTGTCGAATTTGCAACAAGGTGTTAAGCTCCAGCTCCAGCTTGGATCGTCATGTTTTGGTACACAGTGGCGAGCGGCCGTTCCACTGTAAATATTGCGGCGATACTTTTACTACCAATGGGAATATGCATCGGCATATGAGGACGCATTCGCAAAGCAAGCAGGAGAGTTACGAGTCGGATGGGAGTGTGGAGAGTAACTTGAGTGGTAGCTCCAAGAGTACTACtgagtataataataataaagtggaGACGAAGTGTCTTAAACGCAAGCTGGAGGGTGCGGTAGAAGTAAATTCGAAACGAAGAGCTAACGAACTAGTTGAAACTGGTCAATTGTACCAATGTCCGGTATGCGAGCGAGCCGACTTTAACTCCATGGGGAATCTAGAAACGCATTTGGAGGACAATCATCCGGAATATCCAGCAAAATGCAACCAATGCCAGCAGATTTTCTCCAACAACAAACTCCTGACCATCCATCGAGCTACAGTCCACGACAGTCCAACCACCAAACATCCAGTTTTGGGATTTAAAGACCTAACATTCGTCGACTTCTCCAGCGAAAAATTCCCGCATATCGCTAGACGCGAATGCGAAATAAACCTACACAAGGCAACAACCGGCTGTTTGAAATTCCAATGTAAAAACTGCTCGCGTGCGTTTCCTTGTGGCACTTCCTTGGAAATTCACGAGAAAAACTGCAAGCAATCCATGGCGGAACTGGAAGATCTTCGTAGCACACACAACACCGAAGATCTTCGACGGATTAACTTCTTCTCCCGCCTACATTTGCAGGATAATTCTCCCGAGAAACCCCAAACGAAACTCCGGGAGCAACTACTAGCTAAGTGTGATAACAGCCCGAAGGACCTCGCGGATATCCAGTCGATCCTTACGAATATTAACCTACAACAAGCGAAGCAAAACGAGCTGTGCTTACCTAAAGCTCATAACATTGACCACTCGGAGACCCGAACTGAACCTGAAGAAGAAAGCCAGGATTTGTTCGCAGTGGAGTTTAGAAGGATGAAACTACGTGGCGAGTTTCCTTGTAGGCTTTGCACGGCCGTTTTTCCGAATTTACGAGCGCTTAAAGGACATAATCGGGCGCATTTGAATGGAAACAACAACGGGACTTATCACTGTAACATGTGTCCACATTCCTCCATGGATAAAGCTGCGCTAATCCGGCATATGAGGACGCATAATGGCGACAGGCCGTATGAGTGCTCGCTTTGTAACTACGCTTTTACTACTAAGGCGAACTGTGAGCGGCATTTGCGGAATAGACACGCGAAAAGCACGAGGGAAGATGTGAAGAAAGCTATAATTTACCACCCGAGCGAAGATCCGACTAATGAAGACTTGAACAAGCTGACGATTGCTAAGGAGGAACAGAAAAAACTTAATATTAGTTTGGATTCGAGTGAAGAGAAAATTCATTGTTCCACACCGAAAGCCCAAGAAATCAAACAGATGATTCCAGATTTAAACACATTGAAACCAGGAGCTTTTCCGAATATTAACGACATAATCCGAAATGAGAATCTGATGTCTTTGAAGGAGCACAAAATAACTCAATCAAACGGAGTACTTCCACAACCGAGTTCTTTTGGTTTTGCTTCGAAACCTCCGCATCTTCCCCCTAGTTTCCCCCCTTCGAAAATTCAGGTGAAAAGCTTGGAGGTACTCAAAGTTCCAGATACCACCCTCGAGTACTCAGATGATGAGGATGATTACATCGAAGAGGAGGCGCCAATGGACCTTACAATTAGTAAAAAGCGTGTAGCTGAGAAGAAACCCGAGGATATTCCACAAGACCTAACAAAGAAATCCCCGACAATTCCAGTGGTGCCTCCTCCAACCCCACAGTTTAACATGGGGGAAATCTTCGCGCAACAGATGCTAAAATCACCTCCAAAAATCGATCCTACTGCTTTGTACGCCTCGCAACTAGCTCGTTTGTACCAGAATAGCTTTCCAACTTGGCCAGGGTTTCCTTTGAACCCTTTGCTGTTCCCTGGGATGCAAGGTCCAGCTTTGTCGGCTAATCCGCAAGTTTTCAAAGAGCGCATGCAACGCTTGCAAATGTGCGGTGGATTTATCTCGGATTTTAACAATGGGTTCAAAGATAATAAAGCTGAGTTGGAGTTGAAGAAACCTGACGAGCTAAAACCGCTGAATGTCGAAGTGAATTCTGCAGGATTTTCCGAGGGTTTACCACAGAATCATCAAAGCCCATCACGCAAGCCGCAGGAGTTGGACTTGATGCAGTCGCCAAACTCCGTGAAGATGGTGATAAAAAACGGCGTGTTAATGCCCAAGCAAAAGCAGCGAAGATACCGCACTGAACGCCCCTTCACCTGCGAACATTGTTCAGCTCGATTTACTCTTCGCTCCAACATGGAACGCCACATCAAACAGCAACACCCGCAGTTTTGGTCGCAACGTCAGAGGGGCAACGTGGGGAACCCCGGAAGAAAACCGCATTGTCCCAAACCAAACTACTGTGATCTCAGTATACCAAACTACGAAGTACCAAAACACGAATACACTGACCACCATACCAAAGAACATttgaaaaatgcgattttatctcaaaaacttCGTGTGGAGATGATTAAGAAGGAGGAGGAAGACGAATGCGCGTTGGTGATTGACGAACCGGAGAAAACTATTGACGAAGGAAATGGAGGTGGAGGTGGAGGTGAAGGAAGACAGTTTGAGAAGACTAGAATTTTGGAGGAGAAGTTAATGTCCGAGTCGTACCAAGCACAAGGGAGGGTAGCGAAGAATGAAGAGAGTCAGGATTTGGTGCCTGTTTCCAGATTGTTGGATAATGCATCGCAGCAGCAGTTTAAGGAGTATTTTAAACGCGAGCAGGAGGAGCATGAGGTTAATGGAGTGGGGAGTGATGAGGACGAGGAGGGTTTGGTGGCTAGTGGAAGTACTAGCGAGGGGAATGTGTCTGGAACCGATGAGAATAGATCAGAATCGGAAACCGCCACAGCACCAGTAAAGAAAAAATCTGCGTACTCCCTGGCCCCAAACCGCGTCTCCTGCCCCTACTGCAGCCGGAAATTCCCTTGGACCTCCTCGCTGCGCCGCCACATCCTAACCCACACCGGCCAAAAGCCCTTCAAATGCAGCCACTGCCCTCTGTTATTCACCACCAAATCCAATCGCGACCGTCATCTGCTGCGCAAGCACGGCAACACCGCCACCCCCATAACCAACGACACCACCTCCAATCCCAACaactcaaattttttaatccgTAACGTGCCCGAACGCCCCTTCAAGTGCGCCAACTGCCCTAGCAGCACCTTTTCCACTTACTCCAACTTGAAGAAGCACATGAGCTTCAAGCATTTGATTAACGCCCAAGGCGATGACAATGGAGCAAGAGGTTATGAGGCTGGTAGTTCAGAGGACGAGAAGGTTATCGTGGAGGCGAAGCCCGATTGGGAAAACCACAAATACTCGGACATGCCGGTGGTCAGCTCGAACCAAAGTGGTAACAACTCGGACCTCCCGTTTAAGTGCCACTTATGTGATGGTTCGTTCAGCGACCGCCAGGAGAGCTTGGATCACATCCGAGATCGTCACACATTAGAATTCGAACTGTTAATGTCGAAAAACGCCTTGGATAGCAACGCCACCACTCCGGATGACACCTCGTGCCACCAGGATGAGGAAGAGAGCGAAATCCGCGGTAAATTCCCCGATTATTCCAACCGCAAGGTCATATGCGCGTTTTGTATGCGCCGCTTTTGGTCTGCGGAGGACTTGAGGAGGCACATGCGCACGCATACTGGAGAGCGGCCGTTTAGTTGCGATATCTGCCGGCGGCGGTTTACATTAAAGCATAGCATGCTACGTCATAGGAAGAAGCATaatgttaattttgaaaatgataaTAATGCTAGTGATGAGGATGGGGGGAATAATGGAATGGAGAAGTTTGAGAAGTTTAAGGgggataataataatttattgcggAAATCCATGGAGAAAACTGACGAATCGGATGGAAACGAAGGAGCGGGAGATTtgattagtaatttattaggTATAAGAGATCGGTCGATTATTGACAAAGTATTGACAGCGTCGCCTGATGATGCTGCGAAAATTCTAGGGGTAAAAAACGGGGTAAgggaataa
Protein Sequence: MQGVVFMPENPQQGSPPPQNTTVTDMDISPKDIRSNQSDSGIFSTTTNTTADQTNCDTDNRSDCSSPERKYVCPICDTMLTSQHDFTLHIRSHNNESEDQDNEKGYICRICNKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRTHSQSKQESYESDGSVESNLSGSSKSTTEYNNNKVETKCLKRKLEGAVEVNSKRRANELVETGQLYQCPVCERADFNSMGNLETHLEDNHPEYPAKCNQCQQIFSNNKLLTIHRATVHDSPTTKHPVLGFKDLTFVDFSSEKFPHIARRECEINLHKATTGCLKFQCKNCSRAFPCGTSLEIHEKNCKQSMAELEDLRSTHNTEDLRRINFFSRLHLQDNSPEKPQTKLREQLLAKCDNSPKDLADIQSILTNINLQQAKQNELCLPKAHNIDHSETRTEPEEESQDLFAVEFRRMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGTYHCNMCPHSSMDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKSTREDVKKAIIYHPSEDPTNEDLNKLTIAKEEQKKLNISLDSSEEKIHCSTPKAQEIKQMIPDLNTLKPGAFPNINDIIRNENLMSLKEHKITQSNGVLPQPSSFGFASKPPHLPPSFPPSKIQVKSLEVLKVPDTTLEYSDDEDDYIEEEAPMDLTISKKRVAEKKPEDIPQDLTKKSPTIPVVPPPTPQFNMGEIFAQQMLKSPPKIDPTALYASQLARLYQNSFPTWPGFPLNPLLFPGMQGPALSANPQVFKERMQRLQMCGGFISDFNNGFKDNKAELELKKPDELKPLNVEVNSAGFSEGLPQNHQSPSRKPQELDLMQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGNVGNPGRKPHCPKPNYCDLSIPNYEVPKHEYTDHHTKEHLKNAILSQKLRVEMIKKEEEDECALVIDEPEKTIDEGNGGGGGGEGRQFEKTRILEEKLMSESYQAQGRVAKNEESQDLVPVSRLLDNASQQQFKEYFKREQEEHEVNGVGSDEDEEGLVASGSTSEGNVSGTDENRSESETATAPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNRDRHLLRKHGNTATPITNDTTSNPNNSNFLIRNVPERPFKCANCPSSTFSTYSNLKKHMSFKHLINAQGDDNGARGYEAGSSEDEKVIVEAKPDWENHKYSDMPVVSSNQSGNNSDLPFKCHLCDGSFSDRQESLDHIRDRHTLEFELLMSKNALDSNATTPDDTSCHQDEEESEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVNFENDNNASDEDGGNNGMEKFEKFKGDNNNLLRKSMEKTDESDGNEGAGDLISNLLGIRDRSIIDKVLTASPDDAAKILGVKNGVRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -