Basic Information

Insect: Pediacus dermestoides
Gene Symbol: Zfpm1
Assembly: GCA_963942485.1
Location: OZ012626.1:42698415-42701360[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.59 54 5.0 0.1 3 23 8 28 6 28 0.95

2 15 0.00067 0.062 14.2 0.2 1 23 498 521 498 521 0.96

3 15 0.1 9.1 7.4 0.2 2 23 601 623 600 623 0.89

4 15 0.00042 0.039 14.9 1.3 1 23 631 653 631 653 0.97

5 15 0.00033 0.03 15.2 2.1 2 23 656 677 655 677 0.97

6 15 0.074 6.7 7.8 4.2 1 23 683 705 683 705 0.91

7 15 0.0003 0.027 15.3 4.7 2 23 712 733 711 734 0.95

8 15 0.16 15 6.7 1.3 6 23 748 765 746 765 0.95

9 15 7.3e-05 0.0067 17.3 3.4 2 23 771 793 770 793 0.96

10 15 0.097 8.9 7.4 0.0 2 23 809 829 808 829 0.96

11 15 0.0004 0.036 15.0 1.4 1 20 835 854 835 857 0.92

12 15 7.3e-05 0.0066 17.3 0.2 1 23 865 887 865 887 0.99

13 15 0.00078 0.072 14.0 3.7 1 23 893 915 893 915 0.98

14 15 8.6e-07 7.8e-05 23.3 3.5 1 23 921 943 921 943 0.98

15 15 0.0013 0.12 13.4 6.0 1 23 949 971 949 972 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.59	54	5.0	0.1	3	23	8	28	6	28	0.95
2	15	0.00067	0.062	14.2	0.2	1	23	498	521	498	521	0.96
3	15	0.1	9.1	7.4	0.2	2	23	601	623	600	623	0.89
4	15	0.00042	0.039	14.9	1.3	1	23	631	653	631	653	0.97
5	15	0.00033	0.03	15.2	2.1	2	23	656	677	655	677	0.97
6	15	0.074	6.7	7.8	4.2	1	23	683	705	683	705	0.91
7	15	0.0003	0.027	15.3	4.7	2	23	712	733	711	734	0.95
8	15	0.16	15	6.7	1.3	6	23	748	765	746	765	0.95
9	15	7.3e-05	0.0067	17.3	3.4	2	23	771	793	770	793	0.96
10	15	0.097	8.9	7.4	0.0	2	23	809	829	808	829	0.96
11	15	0.0004	0.036	15.0	1.4	1	20	835	854	835	857	0.92
12	15	7.3e-05	0.0066	17.3	0.2	1	23	865	887	865	887	0.99
13	15	0.00078	0.072	14.0	3.7	1	23	893	915	893	915	0.98
14	15	8.6e-07	7.8e-05	23.3	3.5	1	23	921	943	921	943	0.98
15	15	0.0013	0.12	13.4	6.0	1	23	949	971	949	972	0.95

Sequence Information

Coding Sequence: ATGGATGCAACCAACATCATTTGTCCTGTTTGTACATTGTATCTCAGACAAGGCATTACATTGAAGCAACATTTAAGCAGCCATCCAAAACAGAGAGTTATAGACGCATTAGTCGAACTGTCAGCTAATGGGAAcaacttaaaattaacagaCACCTCCTCAAATTCTGCGTCTGAACCATCAGAAACAGCTTTATCCAACTCGACTATTGTTAACCAGTCATGGAACAACCAGACAAGTCCAAGTTCTACGAACATTGCAGCTCTCCAAGGAAATCATCTGTTCATATACCAACAAAGCATGAGCACGACTACACCTCAACCAAACGTGTTAAATATAAATCCTTTGACGCAACAGTATGTAATCCCCACTATTTTCAATCCGCAAATGATGCCGTATGTGTATCAACAACAGCAAGTCATAATGTCGAGCAATGGGTGTGTTCCGTCATCTTTGAAGGCTCTTCCTTTTGATATGTCGAGCACAACAGATAATAACGAGGTCCCCGTTATGGAAATTACAGAGGAGAGTTGCAGTTCCATTGAGAAAACTGACGAAATAACCCCAGATGCATGCGTGGAAGTTGTGGAGGAAAAACAGGAGGTCACTGAAGATGAGTTGAATGTTTCCAAGGAAGACATCGATAGTGGCATTGGTTCTTATAACCTAGTTGATGAGAAATCTGTGTCTGAATATGGTGAACAACATAACGAAGAACTTGATTTATCAACAAACGCTACTCCAGTTTCTGCATGGGATTTAAAGTTACAAACAGATTTAAACAAAGCTTGTCAGACTCAAACATCAAGCTCTCCAGCACATCCAGCAATACAAGATGAAGATTTAGAGCACGATAATCAAGAGGAAGATCATCCTGAATATTACTACGTTGATCAACCAAGTGAAGAAGTTCCATTTTCTGAAATACGCAACATAAATTCCAACTCGTTGTCTGAGCCAATTTACACAAGTTCAAACATACTACAATCGAATGATCACATTGATTTCGTGGAAATGGATGGAATGCGCGTGATAATCGGCGATTTTTCTTCGAATCAAATTATATCACAAGTAGAAAACTTCGAAAGTTCTCATGGGGAAAGACCAGGAGTTCTAATGACTATCGGCGATATAACCGATGGCTCTAAGACAGGCTTTCATGAGCCAGACGATGAAACTGTCTCTCGAGGTAGTTCTAATGTTAATATTAGAGCCGACGAACGAATGCCGCCACGTGGCGAACTGTCCGGTCAAGAAAGCTTAGGAGGCGCAAGCGACATCACTTGGAACCGAATACAATACCATGAAGGTAGTTCTGGAATGTCTGGTTCGTATGATTTATTAGCGAGGGAATCGTGGGAAGCTTCTGATAGTTCCGATGTGGAAATGCCACCCTTGCAAAGTCGCCTTCCAATGGATCTAACCTATCCAGAAAACGAGTACAATGACGATACTCCAACCATCGTAAGTTTCAGTGGACCTccgttaaattttaaatgtccaATTTGTGAGGAAGCTTTTGCTAACTCCAAGGAGAGGAAAGAACATGAAATTACTAAGCATCCGgagaaaattggaagaaacttGATTGGCTCAGAAATTGGTAAAAAGAAAGTGAAAAAGCTGACTGTTAAACCGAAAACAACCGAATCGGAACCAGAAAACAACTTCAATGTGTTCACTAATAAACTGAAACTTGAAACTAATGCAGACGATCAAACTGATATTGTTGCGTTGGAAACGCCGCTGATAGAAGCAGTGAAAATTGACGAGGCTGTTGTTGCAGTGGATTTAAAGACAGTTTGTCCTCTCTGCGACTGCGTTTTACCAAATGCCAAAGCTCTGAAACTGcacaagtatgaagtacataAAGTCTCTGCAGATGTTCGTCATAAATGCGCAACCTGTGGCGAAGCTTTCCCTAATGAATACAAATACACGCAACACCTCAAGTTGCACCCGTTGGAATGCAGAATGTGTGGAAAGTTGTTCTTCCGTCGGCAAAACATGCAGCTGCATATGAAGCGACATTTGGGTCTAAAACCTTACAAATGCGAGTTGTGTCAAAAGTCGTTTGTTACGAAGCAGAAGCACGATGAACATAAGAACACGCATACGGGGGAGGCGCCGATAAAATGTGCGTTGTGTTCCGAAACTTTCAGGCGGCATTCCAATCTAGTGCAGCATCGCAACAGGCATCACtttaatttgaagaaaaaactCAAAGATTACATTTGCTTTTGTGGCGAGGTTTTCCATTCCAAGAAAAAGTTGGCATGGCACAAGGAGATTCACGATGCCAAACCGAAATCCTGCACCCAGTGCAGTGAGAAATTCGTGCACATGTCCAGTTTGACCAGGCATATGAGGCGAGCTCATAACGAGAAATTCCTGCCCAACACTGATAGAAGTTCTGAGAATGTGGAGTGTCCCATTTGTAAGGGAATCTACCTGCGCTCTTCCCTTGAGGTGCATATACGTAATCACAGCGGGCAGAAACCTTTCACCTGCCTGATTTGCAGCAAAGATTTCACGACAAAGTGGAATCTGAAACTTCACAAATGGACGCATGCATCTCGTACTTCAAAACCCTACAAGTGTGATCAATGCAAAGGGGCATTCATACGCGAATCGGACTACATAGCACACATGAACTCTCATAAGAGCGTTCGTCCTTACACCTGCAATTACTGCGGAGCACAATTCATCCGGAAGTACAACTGCCAGCGACATGTTAAAGAGCACGAAAATGGTAAAacgttcaactgccaagtttGTGGTAAGTCTTTCCACAGGTCGTACTATTTAAAAGATCACATGCGAGTACACAGTGGAATTAGACCGTATGCTTGTCACATTTGTGGCAAAACCTCAACAACTAAATCTAATCATAATAAACATGTACAAATACATCATGCTAGGGAGCCCGTTAGTACTGAAAATTAA
Protein Sequence: MDATNIICPVCTLYLRQGITLKQHLSSHPKQRVIDALVELSANGNNLKLTDTSSNSASEPSETALSNSTIVNQSWNNQTSPSSTNIAALQGNHLFIYQQSMSTTTPQPNVLNINPLTQQYVIPTIFNPQMMPYVYQQQQVIMSSNGCVPSSLKALPFDMSSTTDNNEVPVMEITEESCSSIEKTDEITPDACVEVVEEKQEVTEDELNVSKEDIDSGIGSYNLVDEKSVSEYGEQHNEELDLSTNATPVSAWDLKLQTDLNKACQTQTSSSPAHPAIQDEDLEHDNQEEDHPEYYYVDQPSEEVPFSEIRNINSNSLSEPIYTSSNILQSNDHIDFVEMDGMRVIIGDFSSNQIISQVENFESSHGERPGVLMTIGDITDGSKTGFHEPDDETVSRGSSNVNIRADERMPPRGELSGQESLGGASDITWNRIQYHEGSSGMSGSYDLLARESWEASDSSDVEMPPLQSRLPMDLTYPENEYNDDTPTIVSFSGPPLNFKCPICEEAFANSKERKEHEITKHPEKIGRNLIGSEIGKKKVKKLTVKPKTTESEPENNFNVFTNKLKLETNADDQTDIVALETPLIEAVKIDEAVVAVDLKTVCPLCDCVLPNAKALKLHKYEVHKVSADVRHKCATCGEAFPNEYKYTQHLKLHPLECRMCGKLFFRRQNMQLHMKRHLGLKPYKCELCQKSFVTKQKHDEHKNTHTGEAPIKCALCSETFRRHSNLVQHRNRHHFNLKKKLKDYICFCGEVFHSKKKLAWHKEIHDAKPKSCTQCSEKFVHMSSLTRHMRRAHNEKFLPNTDRSSENVECPICKGIYLRSSLEVHIRNHSGQKPFTCLICSKDFTTKWNLKLHKWTHASRTSKPYKCDQCKGAFIRESDYIAHMNSHKSVRPYTCNYCGAQFIRKYNCQRHVKEHENGKTFNCQVCGKSFHRSYYLKDHMRVHSGIRPYACHICGKTSTTKSNHNKHVQIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -