Basic Information

Insect: Pediacus dermestoides
Gene Symbol: -
Assembly: GCA_963942485.1
Location: OZ012628.1:10743409-10747190[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.16 14 6.8 3.8 1 21 157 177 157 181 0.93

2 11 5.4e-06 0.00049 20.8 4.7 1 23 187 208 187 208 0.97

3 11 1.2e-06 0.00011 22.8 0.3 1 23 214 236 214 236 0.99

4 11 6.1e-07 5.5e-05 23.8 1.1 1 23 242 264 242 264 0.98

5 11 0.00024 0.022 15.6 5.2 1 23 276 298 276 298 0.98

6 11 3.3e-06 0.0003 21.5 3.2 1 23 325 347 325 347 0.99

7 11 3.1e-06 0.00028 21.6 0.1 1 23 352 374 352 374 0.95

8 11 2e-05 0.0018 19.1 2.0 1 23 380 402 380 402 0.99

9 11 9.4e-06 0.00086 20.1 4.9 1 23 408 430 408 430 0.98

10 11 1.2e-07 1.1e-05 26.0 0.6 1 23 436 458 436 458 0.99

11 11 7.8e-07 7.1e-05 23.5 0.5 1 23 464 486 464 486 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.16	14	6.8	3.8	1	21	157	177	157	181	0.93
2	11	5.4e-06	0.00049	20.8	4.7	1	23	187	208	187	208	0.97
3	11	1.2e-06	0.00011	22.8	0.3	1	23	214	236	214	236	0.99
4	11	6.1e-07	5.5e-05	23.8	1.1	1	23	242	264	242	264	0.98
5	11	0.00024	0.022	15.6	5.2	1	23	276	298	276	298	0.98
6	11	3.3e-06	0.0003	21.5	3.2	1	23	325	347	325	347	0.99
7	11	3.1e-06	0.00028	21.6	0.1	1	23	352	374	352	374	0.95
8	11	2e-05	0.0018	19.1	2.0	1	23	380	402	380	402	0.99
9	11	9.4e-06	0.00086	20.1	4.9	1	23	408	430	408	430	0.98
10	11	1.2e-07	1.1e-05	26.0	0.6	1	23	436	458	436	458	0.99
11	11	7.8e-07	7.1e-05	23.5	0.5	1	23	464	486	464	486	0.96

Sequence Information

Coding Sequence: atGAATGGCATTGACGAGACGAATTTCAAGGGTTtaagtaaagaaaaatttgataaaatttgtcGAACTTGTTTAAGTGAAACAGCCGTCATTTCAACCGTAGACTTGTTTTTAGAAATCGACGTGAAAGTAATGGATTTAATGGAACAATTTGCACAGTTAGAGATCTTCAACGATGACCTACCGCAGAATATCTGCCCAAATTGCATAGAGGAATTCCATAAGTTTTATTCGTTTCGCAAGCAATGTCGCGACAGCGAAGCTCTTCTTAAGGCAATTAATCAAAGCCAAAACGACTACATACGCTTTGAAATAGTTAAAAGTGAGCCTGAAGGTGATTTCGACGATACCAATGAACTACCAGGTGAAAACTCAGACTCGGATGACTCGGACGAAGACAAACCTTTACTCAACCGAATTGATTCCGCTGATTATACACCGAAGAAACGAAAGCGGTTTAAAAACGTCTACAAATGCAGACAATGTTCGGTGGTGTGTCACAGTCAGCAGGAGTTGAAACAGCATCGATTAGATGCGAAGCATCCAGAGAGGAAGAATCATAGTTGTAAATATTGTGATAAGATGTTTACTAGTAGCAAGTTGAGGCAGCATATGCGAGTGCATACCAAGGAAAAGCCGTACGTGTGCCAGATTTGTTCGCAGGCGTTTAGTATGAGTGGGAATTTGAAGAGGCATGTTATGACGCATACGGGGGAAAGGCCCCATGTGTGTAAGGTTTGCGGAAAAGGTTTCATTCAAGCGACGTCGTTGCAGACCCATCTAAAAACCCACGCCCCCGCAGATGGTTCCGGCAATACTAACAACTTCATGTGCAACTTCTGCGGCCGTTGTTTCAAACGCTTGGCACCCTTCCACGCTcatataaaaaaacacaaaccCACCATCGATGAATCAGAGGAAACAGAAGAAACCAAACCAACCATCGACGACAAGGATTCCATCGTTCTGCAATACCAATGCGACATCTGCAGTCGCTCTTATAGAACCAAGCATTTACTCAAAGCTCACACGCTAACACACGGCGCAAAAAGCTTCCTTTGCAGCGACTGCGGCAAGGGTTTTGTTACGAAAGCCGCTCTGTTATCCCATCTTAAAGTCCACACAGGGGAAAAACCGTATACTTGTACAATTTGCAAGAAATCTTTTGCACATGTTGGGAGTTTCGACTCGCATATGCTAACTCATACAGGACACAAGCCCTACAACTGCTACATGTGTCGTAAAGCTTTCACACAACTATCTCATCTTAAATACCATTTAAGAACGCATAGTGGGGAAAGACCTTACACTTGTTCGTATTGTGGAAAGAATTTTGCTTTGAAAGGGAATTTGACTGTGCATGTTCGGACCCACACTGGGGAGACACCGTATTTGTGTCCGGTGTGCGGAAGGGGGTTTTACGACTCGAGTAGtatgaaaaaacatttaaggAGTCATGGGCCGGATTTAGGGGAGATATCGGAGGCGAATTGTGATTATTCTGAGGAGCTTGGCGTTTCGAAGCCACAGATCGAAGATTTATGa
Protein Sequence: MNGIDETNFKGLSKEKFDKICRTCLSETAVISTVDLFLEIDVKVMDLMEQFAQLEIFNDDLPQNICPNCIEEFHKFYSFRKQCRDSEALLKAINQSQNDYIRFEIVKSEPEGDFDDTNELPGENSDSDDSDEDKPLLNRIDSADYTPKKRKRFKNVYKCRQCSVVCHSQQELKQHRLDAKHPERKNHSCKYCDKMFTSSKLRQHMRVHTKEKPYVCQICSQAFSMSGNLKRHVMTHTGERPHVCKVCGKGFIQATSLQTHLKTHAPADGSGNTNNFMCNFCGRCFKRLAPFHAHIKKHKPTIDESEETEETKPTIDDKDSIVLQYQCDICSRSYRTKHLLKAHTLTHGAKSFLCSDCGKGFVTKAALLSHLKVHTGEKPYTCTICKKSFAHVGSFDSHMLTHTGHKPYNCYMCRKAFTQLSHLKYHLRTHSGERPYTCSYCGKNFALKGNLTVHVRTHTGETPYLCPVCGRGFYDSSSMKKHLRSHGPDLGEISEANCDYSEELGVSKPQIEDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -