Basic Information

Insect: Pediacus dermestoides
Gene Symbol: Zfa
Assembly: GCA_963942485.1
Location: OZ012626.1:29685439-29692263[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.2e-05 0.002 18.9 3.3 2 23 144 165 143 165 0.97

2 16 0.00055 0.051 14.5 0.6 2 23 171 192 170 192 0.96

3 16 0.014 1.3 10.1 2.5 3 23 212 233 210 233 0.94

4 16 0.00028 0.026 15.4 0.1 2 23 248 269 247 269 0.96

5 16 0.002 0.18 12.8 3.0 1 23 275 297 275 297 0.98

6 16 0.00033 0.03 15.2 0.1 1 23 305 327 305 327 0.97

7 16 6.5e-08 6e-06 26.9 1.2 1 23 332 354 332 354 0.97

8 16 0.0029 0.27 12.2 5.3 1 23 360 382 360 382 0.98

9 16 1.4e-06 0.00012 22.7 1.6 1 23 388 410 388 410 0.98

10 16 0.00013 0.012 16.5 2.8 1 23 416 438 416 438 0.98

11 16 1.8e-06 0.00016 22.4 0.9 3 23 446 466 444 466 0.96

12 16 3.9e-08 3.5e-06 27.6 0.0 2 23 472 493 471 493 0.97

13 16 2.6e-05 0.0024 18.7 1.3 1 23 499 521 499 521 0.98

14 16 5.4e-06 0.00049 20.8 0.3 1 23 527 549 527 549 0.98

15 16 2.8e-06 0.00025 21.7 2.5 1 23 555 577 555 577 0.98

16 16 0.036 3.3 8.8 0.3 1 20 583 602 583 604 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.2e-05	0.002	18.9	3.3	2	23	144	165	143	165	0.97
2	16	0.00055	0.051	14.5	0.6	2	23	171	192	170	192	0.96
3	16	0.014	1.3	10.1	2.5	3	23	212	233	210	233	0.94
4	16	0.00028	0.026	15.4	0.1	2	23	248	269	247	269	0.96
5	16	0.002	0.18	12.8	3.0	1	23	275	297	275	297	0.98
6	16	0.00033	0.03	15.2	0.1	1	23	305	327	305	327	0.97
7	16	6.5e-08	6e-06	26.9	1.2	1	23	332	354	332	354	0.97
8	16	0.0029	0.27	12.2	5.3	1	23	360	382	360	382	0.98
9	16	1.4e-06	0.00012	22.7	1.6	1	23	388	410	388	410	0.98
10	16	0.00013	0.012	16.5	2.8	1	23	416	438	416	438	0.98
11	16	1.8e-06	0.00016	22.4	0.9	3	23	446	466	444	466	0.96
12	16	3.9e-08	3.5e-06	27.6	0.0	2	23	472	493	471	493	0.97
13	16	2.6e-05	0.0024	18.7	1.3	1	23	499	521	499	521	0.98
14	16	5.4e-06	0.00049	20.8	0.3	1	23	527	549	527	549	0.98
15	16	2.8e-06	0.00025	21.7	2.5	1	23	555	577	555	577	0.98
16	16	0.036	3.3	8.8	0.3	1	20	583	602	583	604	0.95

Sequence Information

Coding Sequence: atgaatgatTTTAACAGTTTATACACACAACCCCCATTTGATATGTCTAAAATATGTAGACTGTGCATGAATCCGTACTTGTTAAACAATTTCGTGTCAATATTCAATGCTGAAGACAATAAAATGTTGATTTCGTCGAAAATTATGGCTTGTGCCTCAATACAggtattAAATGGAGATGGTTTACCTTCTACTATTTGCACAAACTGTTCACAGTTGCTAGAAAATACTTATTTATTCAAACTACAGTGTGAACAATCCGACCGAACTTTACGAGGTTATTTGGCAGATTCCAGCCAAAATATCGAAATTAAATCAGCAGACGACAGTGCTGAGTCCTCAATATTAGGAAATGATTTTACAGATGCTGACGATAGTTTTCATTCGGATGGTTTTGAAccaaattccaaaaatgtggAAGAAGCCCTAACTTGTAGTCACTGTGcgaagaaattcaaaaaagcTAACCAACTCAAACTACACATGCGAGTCCATAAAAAGAAAACCTCCTCGTGCCGTCAGTGCTCTAAAATCTTCGATTCGCCCTATGAGCTAGCGCAGCACAATAAAACTCACTCAACCTCAACGTCTTCTACTACAAACAACCCAAACAATCTAGAAACTGTGCATTTGTGCTCAATTTGCCATGATAAATTCCAAGACAACAGCAAACTAATCGACCACATGCTTTCTGAGCACACAGAAAAGGAGGTGAACATTGtagaaaattccaataaaCTCATTTGTGGTATTTGCAACAAAACTTACttgaataaaactaatttggcAGCTCATATGGGGACACATACAGGGAATAAACCGTTTGAATGCAATATTTGCCAGAAACGGTTCACGCAGGGAAGGGCTTTTGCGTGTCATATGCGTTCACATTCGGATGAAATTGAGAAACCATTTGCTTGTGGAACGTGTGGAAAAACGTTTGTATTGGAAAGTCAGTTGGGGATCCACGAGAAGAAACATGAGGCTGGGGGACATGTTTGTAAAATATGTGGGAAAAGTTACAGTAACTCAGGTAACCTGAAGGGGCATATGCGTTTACACACCGGCGACAAACCCTACACTTGCCACATATGTGATCGCAAGTTTGCCCAAAGCAATGCCCATTCTTACCATATGAAAACCCATTTTGGTGACCGGCCGTTCTCCTGTGACACCTGCTCCAAATCGTTTACAACTAATGGACAACTTATTAACCATCGTCGATTGCACACTGGCGAAAGACCGTTTGTTTGTACCGTTTGTCCTAAAAGGTTCACACAAAAGTTCGCTTGTACTATCCACATGATGACACATACGGGGAACAAGCCTCATTTGTGTAACATTTGTGGCAAGAAGTATTCGCAAAGTAACCAGTTAGCGGAACATATTCGAGTTCATAATGGTGAAACCCTCCAGTGTAACATTTGTGGCAAAGCGTATACCACTGCTGGTAATCTGGCTGCCCATATGCGCATCCACACCGGGATCAAACCCCATGTCTGTGATATCTGCAATAAAGCTTTCTATGTAGCCAACAAATTAGCCAAACATAAACGGACCCACACAGGAGATAGACCATACTCTTGCAATGAGTGCTCCAAGAAATTTGTATCTTCCGAAGCTCTGAAAATTCATGGTCGCATTCATACTGGGGAAAGGCCATACGCTTGCCAAATTTGCAGTAAATCGTTTATCAGCAGCTCACATCGTACGGCGCACATGAAAACACATGCTGCTGGTGTGAAATTCTATTGCAATGTTTGTTGTCAGAGCTTTGGAAGTGCTGTGGATTTAACAGCGCATCAAAGTCAATGTGGTAAAAGTGTGCGGAGGATGAGTGATGAAGCGAATGTTTATGCTGTTATTAGTGATACTATAACTTATTTATAG
Protein Sequence: MNDFNSLYTQPPFDMSKICRLCMNPYLLNNFVSIFNAEDNKMLISSKIMACASIQVLNGDGLPSTICTNCSQLLENTYLFKLQCEQSDRTLRGYLADSSQNIEIKSADDSAESSILGNDFTDADDSFHSDGFEPNSKNVEEALTCSHCAKKFKKANQLKLHMRVHKKKTSSCRQCSKIFDSPYELAQHNKTHSTSTSSTTNNPNNLETVHLCSICHDKFQDNSKLIDHMLSEHTEKEVNIVENSNKLICGICNKTYLNKTNLAAHMGTHTGNKPFECNICQKRFTQGRAFACHMRSHSDEIEKPFACGTCGKTFVLESQLGIHEKKHEAGGHVCKICGKSYSNSGNLKGHMRLHTGDKPYTCHICDRKFAQSNAHSYHMKTHFGDRPFSCDTCSKSFTTNGQLINHRRLHTGERPFVCTVCPKRFTQKFACTIHMMTHTGNKPHLCNICGKKYSQSNQLAEHIRVHNGETLQCNICGKAYTTAGNLAAHMRIHTGIKPHVCDICNKAFYVANKLAKHKRTHTGDRPYSCNECSKKFVSSEALKIHGRIHTGERPYACQICSKSFISSSHRTAHMKTHAAGVKFYCNVCCQSFGSAVDLTAHQSQCGKSVRRMSDEANVYAVISDTITYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -