Basic Information

Insect: Pediacus dermestoides
Gene Symbol: -
Assembly: GCA_963942485.1
Location: OZ012630.1:6915594-6919191[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 5.3 4.9e+02 2.0 0.3 6 23 2 19 1 19 0.84

2 27 0.01 0.93 10.5 0.3 1 23 24 47 24 47 0.97

3 27 0.00013 0.012 16.5 0.6 1 23 52 74 52 74 0.98

4 27 0.032 2.9 9.0 0.1 1 23 83 105 83 105 0.96

5 27 0.0085 0.78 10.8 0.1 3 23 115 135 113 135 0.95

6 27 9.8e-05 0.0089 16.9 1.0 1 23 141 163 141 163 0.95

7 27 5.5e-05 0.0051 17.6 6.8 1 23 169 191 169 191 0.97

8 27 0.32 29 5.8 0.1 1 17 197 213 197 214 0.94

9 27 0.00017 0.015 16.1 0.3 2 23 216 237 215 237 0.96

10 27 1e-05 0.00095 19.9 1.9 1 23 242 264 242 264 0.98

11 27 0.002 0.18 12.8 0.5 2 23 270 290 269 290 0.97

12 27 0.014 1.3 10.1 2.8 1 23 295 318 295 318 0.96

13 27 0.00047 0.043 14.7 0.1 1 23 323 345 323 345 0.96

14 27 7.1e-05 0.0065 17.3 0.3 1 23 354 376 354 376 0.98

15 27 3.3e-05 0.003 18.4 0.8 3 23 386 406 384 406 0.96

16 27 0.00018 0.016 16.0 0.2 1 23 412 434 412 434 0.98

17 27 4.7e-07 4.3e-05 24.2 2.4 1 23 440 462 440 462 0.98

18 27 0.0047 0.43 11.6 0.2 2 23 511 532 511 532 0.98

19 27 0.00016 0.015 16.2 0.7 1 23 565 588 565 588 0.96

20 27 1.3 1.1e+02 3.9 0.1 3 23 595 615 594 615 0.88

21 27 0.0041 0.37 11.8 0.5 1 21 634 654 634 655 0.94

22 27 0.0069 0.63 11.0 7.8 1 23 661 683 661 683 0.98

23 27 0.13 12 7.0 1.0 1 21 847 867 847 868 0.95

24 27 0.0058 0.53 11.3 0.4 3 21 876 894 875 897 0.89

25 27 0.0082 0.75 10.8 1.5 2 23 902 923 902 923 0.97

26 27 0.0044 0.4 11.7 4.1 1 23 929 952 929 952 0.96

27 27 0.00025 0.023 15.6 3.7 1 23 957 979 957 979 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	5.3	4.9e+02	2.0	0.3	6	23	2	19	1	19	0.84
2	27	0.01	0.93	10.5	0.3	1	23	24	47	24	47	0.97
3	27	0.00013	0.012	16.5	0.6	1	23	52	74	52	74	0.98
4	27	0.032	2.9	9.0	0.1	1	23	83	105	83	105	0.96
5	27	0.0085	0.78	10.8	0.1	3	23	115	135	113	135	0.95
6	27	9.8e-05	0.0089	16.9	1.0	1	23	141	163	141	163	0.95
7	27	5.5e-05	0.0051	17.6	6.8	1	23	169	191	169	191	0.97
8	27	0.32	29	5.8	0.1	1	17	197	213	197	214	0.94
9	27	0.00017	0.015	16.1	0.3	2	23	216	237	215	237	0.96
10	27	1e-05	0.00095	19.9	1.9	1	23	242	264	242	264	0.98
11	27	0.002	0.18	12.8	0.5	2	23	270	290	269	290	0.97
12	27	0.014	1.3	10.1	2.8	1	23	295	318	295	318	0.96
13	27	0.00047	0.043	14.7	0.1	1	23	323	345	323	345	0.96
14	27	7.1e-05	0.0065	17.3	0.3	1	23	354	376	354	376	0.98
15	27	3.3e-05	0.003	18.4	0.8	3	23	386	406	384	406	0.96
16	27	0.00018	0.016	16.0	0.2	1	23	412	434	412	434	0.98
17	27	4.7e-07	4.3e-05	24.2	2.4	1	23	440	462	440	462	0.98
18	27	0.0047	0.43	11.6	0.2	2	23	511	532	511	532	0.98
19	27	0.00016	0.015	16.2	0.7	1	23	565	588	565	588	0.96
20	27	1.3	1.1e+02	3.9	0.1	3	23	595	615	594	615	0.88
21	27	0.0041	0.37	11.8	0.5	1	21	634	654	634	655	0.94
22	27	0.0069	0.63	11.0	7.8	1	23	661	683	661	683	0.98
23	27	0.13	12	7.0	1.0	1	21	847	867	847	868	0.95
24	27	0.0058	0.53	11.3	0.4	3	21	876	894	875	897	0.89
25	27	0.0082	0.75	10.8	1.5	2	23	902	923	902	923	0.97
26	27	0.0044	0.4	11.7	4.1	1	23	929	952	929	952	0.96
27	27	0.00025	0.023	15.6	3.7	1	23	957	979	957	979	0.98

Sequence Information

Coding Sequence: ATGTGTCTATTAATCCTGACGTCTAACAAAGCCTTCCAAACCCACGTGAAGACCCACACAAAACAACTATACTCATGCGAGTCCTGCACCAAAAGCTACCCGGATATGAGACGTCTTGAACAGCATGTTAACTCAGCCCACCTGGATATTCGCTACAATTGCTCGATTTGTCCCAAAAATTTCGCAAGTATGAATTATCTAAAATCCCACGAGAAAGTCCACAAACCTGGGTATACACCCAGAAAGTTCCCTTGCGAGATTTGTGGTAATAGTTACGTAAAAAAAGCGGCACGTGATCAACATGTTAAGATACACGAAGGAGCGTCTAATCAAACTCATCTTTGTGATATTTGTGGGAAGGCTCTGGCAGGAATTGCTTCCCTAAGGGACCATAAGCGAGTGCACACAGGGGAGAAACCGTTTTTATGCGAGAGGTGCCCTAAAACTTTCAGGACGAAGACGTTGTGGCGTCAGCATCAAATTGTACATTTGAAGAAACGAGCTCATAGTTGTAGTACTTGTCATAAGACTTTCACCCAAAGAAGTACTTTGAATATCCATACGAGGTTGCATACTGGCGAGAGGCCTTATGAGTGTGTTGTGTGCCTCAAGGGTTTTGTTACGAAGACTTTGTTAAAATCCACGCAATGTGCCCTATGCCCAAAAGTCTTTGCGTCGAAAAAAGCGTTAAAGTACCACTTGGAAAACCACGGCGAGCCTTTATTTTCTTGCAGCATTTGCGATGCGGTCTTCCGACATAACAACCAACTGAAACTCCACGTGAAAACTCATTTTAACTCGGAGACAAAGTGCACGATATGCGAGGTGACCTTCGAGGAAGGCTCGCTAAAGTCCCACATGAAGACACATGAAGACAAACAATACATATGCGAGTTTTGTAGTAAAGGCTACCGCGATAAAAAGGATAAAAAACACCATGTTAACTCGATCCACTTGAAAATTCGCTATAATTGTTCGATTTGTCCTAAAGAGTTCGCTAGTATGGAGTATCTAAGACTTCATGAGGAAGTCCATAGACCTGGATACAGACCTAAAGTGTTTCCTTGCAAAGTTTGCGGTAACACTTACGCGAAGAAGTCGACGTTGGATCGGCATGCTAGGGTGCATGATAAAGGGGGTGCGGAAACGCACCTTTGCGACATTTGTGGGAAAACTGTGACATCTGCTGTTTCGTTAACTGCTCATAAGCGGAAGCATACAGGAGAAAGGCCGTTTGAGTGTCCGGTTTGTCTTAAGAAATTTGCGGTTGTTAACTATTTACGAGTACACCAAAGAGTGCATACTAATGAGCGACCTTATAGTTGTACAGTGTGTGGAAAGAACTTTACACAAAGGACTAGTTTGACGTATCATATGCGGAATCATACTGGAGAGAAGCCGTATGAGTGTGATATTTGTAGGAAGAGGGACCCTTTAACGCAATTCCAATGCAAATGCTGCCACCACACGTTCCTCACCAGCTTAGAAGTAACAACACACGAGAAAATATGCCCCCCAAACATCAAACCTCGCTGCCCCATCTGCTTCAAGTACTTCCCCAATGCAGTGCTTGCAAAAAATCACTTGACAACCCACACGACTAAGCGTCGATACAAATGCTATCCTTGCGGTAAAGAGTTTCCATCCATGGCGACCCATGGCAAACACATTTGTTGTTCACCTGACAGTAAATTTAGATGTGACGTTTGCCCTAAAGAGTTCTTCACAATGACGTCGCTTAATAAGCATGTGAATTACGCACATAAGGGTGTGAGAAACGCCTGCTCGATATGCGGTGCAGAATTCGTCGATGATGAGCTTGCGAGGGAGCATGAATTGCATCATGGATGGGAACTGGTACCCAGTGAACGTGACACCTCCTCCTCGGACGAGTCCCGTTACCAATGCGGCATTTGTTCAGAGGTGTTCCCCACCAAGAATAAATTCCTCGAGCACCACATGAATTTGTTTGGTGAAAAGTACACCTGCTGCAAATGCCAGGAGAGTTTCCGCACCTGCACCGAGCTCTATCGCCATTACGAAAGCCACAAATTCCAAGTGGTGGTGCAAGAGGACGATGGGGAGCAACTAGAGGAGATCGTATTGAACTACGATGACTCAAACGAGGTTGTAGTACAGCCTTCGATGAGCGACGCGAATGAACTCTTGTACATCCTCGATGACTCCCACTGTGTTAACGAGGTGGTAATAGACGAAGAGCAACTAGTTGAGAGTAGTGAACAAGCTAAGGCGGCGTCGAGAGCTGACACAGTCGCGATAGTTAACTTGGAGCATGGTTATATGATACCTAACGTAATAGAACAGGAGGATGAAGAAGAGGGGGCAGAGGACGAAGAAGATGTCATCTACGAGCAAGGTAATCATTACCTAGTGCGGAAGAGAGTGGTGAAGCAAGATTTGAAGCTCTCGCCTAGTAAACCCAGAACGCCTCAGCCGAAGCGTCGCCATGAAGTGCCTGATTTCTCCGCTTCGAGTTACGTCTACATCAACGCCAACGAAGAAATCGACGTGTCGCACTATAAGTGTCTGCGTTGCGAACAATTATTCATCAGCAAGTTTGGTTTCTTCCGTCACATAGAGAAGGGTAAATGTTTCATAAATAATTGTGACGTGTGCAGTGCTACCTTCAATCGGAACAGTGAGTTCTTCAATCATTATGTGGCCGAGCATACTGACAGGGCTGTTTGTAATTTCTGTTTCCGAACGTTTATGTATGAGAAGAATGTGAAGGAGCACATGTTGAGGCACTTGGATCAGTTTAGGCATCGATGCGAGGAATGTAATAAAGGGTTTTATACGGTGAGGGAGTACAGGAACCACTATAAGAACAGGCATATGGGGATAAGGCATAAATGTAATACGTGTAGTAGGACGTTTGCTGATGAGTACTATTTTAAGAAGCACGTGGCCACGCATGCCAAGGCCACAGCGAGCATTGTTAAgattattaattga
Protein Sequence: MCLLILTSNKAFQTHVKTHTKQLYSCESCTKSYPDMRRLEQHVNSAHLDIRYNCSICPKNFASMNYLKSHEKVHKPGYTPRKFPCEICGNSYVKKAARDQHVKIHEGASNQTHLCDICGKALAGIASLRDHKRVHTGEKPFLCERCPKTFRTKTLWRQHQIVHLKKRAHSCSTCHKTFTQRSTLNIHTRLHTGERPYECVVCLKGFVTKTLLKSTQCALCPKVFASKKALKYHLENHGEPLFSCSICDAVFRHNNQLKLHVKTHFNSETKCTICEVTFEEGSLKSHMKTHEDKQYICEFCSKGYRDKKDKKHHVNSIHLKIRYNCSICPKEFASMEYLRLHEEVHRPGYRPKVFPCKVCGNTYAKKSTLDRHARVHDKGGAETHLCDICGKTVTSAVSLTAHKRKHTGERPFECPVCLKKFAVVNYLRVHQRVHTNERPYSCTVCGKNFTQRTSLTYHMRNHTGEKPYECDICRKRDPLTQFQCKCCHHTFLTSLEVTTHEKICPPNIKPRCPICFKYFPNAVLAKNHLTTHTTKRRYKCYPCGKEFPSMATHGKHICCSPDSKFRCDVCPKEFFTMTSLNKHVNYAHKGVRNACSICGAEFVDDELAREHELHHGWELVPSERDTSSSDESRYQCGICSEVFPTKNKFLEHHMNLFGEKYTCCKCQESFRTCTELYRHYESHKFQVVVQEDDGEQLEEIVLNYDDSNEVVVQPSMSDANELLYILDDSHCVNEVVIDEEQLVESSEQAKAASRADTVAIVNLEHGYMIPNVIEQEDEEEGAEDEEDVIYEQGNHYLVRKRVVKQDLKLSPSKPRTPQPKRRHEVPDFSASSYVYINANEEIDVSHYKCLRCEQLFISKFGFFRHIEKGKCFINNCDVCSATFNRNSEFFNHYVAEHTDRAVCNFCFRTFMYEKNVKEHMLRHLDQFRHRCEECNKGFYTVREYRNHYKNRHMGIRHKCNTCSRTFADEYYFKKHVATHAKATASIVKIIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -