Basic Information

Gene Symbol
ZFX
Assembly
GCA_963942485.1
Location
OZ012628.1:8199188-8207156[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0045 0.41 11.6 0.9 1 23 91 113 91 113 0.97
2 25 0.00014 0.013 16.4 0.2 1 23 119 141 119 141 0.98
3 25 0.00027 0.025 15.5 0.3 2 23 147 168 147 168 0.97
4 25 0.00043 0.039 14.9 0.1 1 23 174 196 174 196 0.97
5 25 0.4 37 5.5 0.5 2 23 207 228 206 228 0.95
6 25 4.4e-06 0.00041 21.1 0.6 1 23 253 275 253 275 0.97
7 25 2.1e-06 0.00019 22.1 0.8 1 23 281 303 281 303 0.98
8 25 4.8e-05 0.0044 17.8 1.4 1 23 309 332 309 332 0.96
9 25 0.13 12 7.0 3.7 1 23 342 365 342 365 0.97
10 25 0.00085 0.077 13.9 7.0 1 23 444 466 444 466 0.98
11 25 9.1e-07 8.3e-05 23.3 0.9 1 23 472 494 472 494 0.99
12 25 0.54 49 5.1 1.9 1 23 500 522 500 522 0.96
13 25 0.012 1.1 10.3 0.2 1 23 530 553 530 553 0.92
14 25 5.9e-07 5.4e-05 23.8 0.9 1 23 605 627 605 627 0.98
15 25 5.8e-05 0.0053 17.6 0.8 1 23 633 655 633 655 0.98
16 25 9.2e-06 0.00084 20.1 1.4 1 23 661 683 661 683 0.97
17 25 0.00012 0.011 16.6 2.2 1 23 689 712 689 712 0.98
18 25 0.00049 0.044 14.7 2.8 1 23 1002 1024 1002 1024 0.98
19 25 5.7e-07 5.2e-05 23.9 2.8 2 23 1032 1053 1032 1053 0.98
20 25 3.3e-05 0.003 18.3 2.0 1 23 1059 1081 1059 1081 0.98
21 25 0.00024 0.022 15.7 0.1 3 23 1090 1110 1088 1110 0.96
22 25 0.0072 0.66 11.0 1.7 1 23 1116 1139 1116 1139 0.97
23 25 0.00037 0.034 15.0 1.8 1 23 1277 1299 1277 1299 0.98
24 25 0.0015 0.14 13.1 0.1 1 23 1305 1327 1305 1327 0.98
25 25 0.0045 0.41 11.6 0.7 1 23 1333 1356 1333 1356 0.97

Sequence Information

Coding Sequence
ATGGATTCGGATCAACTACAGGCAATTCTTACGATACCAGACGACACATTCAACCTCAACACCGAATTAAACGAAACAGTAACAGCGTATTTCAAAGATTCTTCCATTGAGGGTGCCACAGAAAACaagcaaatattttacattacaTCTAACAACCAATTCCCTCTTACTCAAATGAGTAACTTAATTCACGTACCAAGGCAACAAATTTATCTGAAACCACCGTCGAAATTACAAGAGGAAATACAGCCAAGCCCCGTAATGACACCGTATAAATGCATAAAATGCAACAAAGAGTTCGACACGATTGCTCTGTATAAAAAACACATGTTGTGGCATCGGAATACTAAGAAATATCCTTGCTCCAAGTGCTCACAGGGTTACAACAACGAAAGGAATCTTATAATCCATATGGCGACTCATCCAGAAGGAAAACCTACTTGTCCAGTTTGTAATCTCTCCTTTCAAAGGTTAGCTAGTCTTAAGTCGCATTTAATGCTGCATCAAGTGGATGAGGGTTTTGTTTGCGAGGAATGTAAAGCAGAGTTTGACAAAGAGGATGAGTTAATTAAACACATGGAACTTCATATTAAACTAAACGAAGAGCCCCCGAACTTAATATGTCCTTACTGTAAAGTTAGTCACGAAAATCCAATAGAGTATAAGAAGCATATTTCGCAGCATGTTAAACTAAGGAAGATGGTGCTGAAAGGCAAGAGGTTTAAGAAGAAACCGGCGAGCAAGATGCAAAACAAACACGTCTGCGTTATTTGTAGTAAAAGCTTTATAAAAGCGTCGCTTTTGGAACGCCATTTAAGGATACACACTGGGGAAAAACCTTTTGTGtgCAGGGTATGCAATCGCGGTTTTACTCAAAATGGAACTCTACGCATTCACATGAAAACACACATCGATAGCCGTCCTTATCACTGCACACTTTGTCCAGCAAGGTTCACCCAAAAAGgtaATTTGAAGGTGCACATAGACAAAACCCACACAGCTGCTAGTATCGGCTCCAAGATCTACAAATGTACTTTGTGCATGtgcattttcaaaaaagttggCTCGTTGAACACGCACATGAGCCGATTTCATTCCGAGAATATAGGCATGGTTATGGATAAATTAAAAGAGTTGGAGGAGCAGCTTAATCCAAGTAAACCTAAGAAGGATGTACTGGAAAAACCACCACCAGCACTTGGTGATACTCAGAAAGAAGAACAGGATGAAGTCGTCGATTCTGGTTTAGTACGTTTAACAGAATCGGGCCAGGATGGTACCATCAAACGGCATTTAGTTAAAAGGGAAAGAGTTGGGGTTGTTTGGTGGTACTGCTGTAGTTACtgttcgaaaaaatgcaaaaagcCGTCGGATTTAATTCGGCATTTTCGCGTACATACCAAGGAAAAACCCTTCCAAtgtcaagacTGTGGTGTAACTTTTACCTTAAAATCGACTTTGGTATCGCACATGAAAACACATGCAGCTTTGAAGGAGTATAAATGTGGTAAATGCGAGGCTGTGTTTACTTGTGTGAGAAGTTTAAGTCTTCATTTAAGCAAACACGAGAAAATGTACACTACAAACTATCAGTGcaatatttgtaataaaatgtatggTTCTTTGGAAGAAGTAAGTTTACATCGAGTTAGTGATCATCTAGACGACAGTAAACCACTAGAGAATCTAGTTAAAGTGGTGCTGAAACGACCTGTACATGAACCACAACCAGGAGTGATAAATCCGGCGAAGCCACGTAACAGTCTAATAAACCTACCGATCAAAGCCAACAATGCGGATACTCCTCGCCCTTTCCAATGCACCATATGCGATGCACGGTTTACCAGGCAGATAAACCTGAAACGCCATGTAAAAGTCCATGAGAACGACAGACAGTACAAATGCGACATGTGCCCCAGGGCTTTTATTTCGTCGTATCGCTTAACCGAACATTTGAAGTACCACAACAATATAAGAAAATTCGAGTGTCAGATATGCCAGAAGAAATTTGTAACGTCCACTTTGCTCAAACGCCACGTTTCATCGCACAGCTCAAAGAGACCTTATACTTGTCCTTATTGCAGCAAGAAATTCAAATCGTTGATGTTGACTAAGACCCACATAAGACGCGTGCATAAACTCCAAATTACACAGACTTTAGCAGAAGACAAGGATGAAAACCCAGACTCCTGTGAAGCTCTATCGACAGATTTGGATAAAACAACTGGGGATACATCGCTTATCTCCCCTGAAAATACCACAGTAAAAATTAGCATTGGAACCACGGACAGCCCTTCGGACTCGTCTAATGTAGTCGTGGGTCTAAGCGAACAGTTCTTCCAAATACCTCAAAATACCCTTCAAATTTTGAACCAGAATGTGGAGGAGCAAAATCAACCGCAACCTGATCCACAAGTCTTTCAAACAATTTACGTTAATTACGACGATTTGCAATTAACAGACTCAGAATTGTGTAACAATGTTCTAGGACAAATCAAACTACATAACGCCGACTCGCTTTTGCTCAATGCAGCTTTGGAAGACACCACTGTTATCTTTAATATCGATGCCACGAAACTACAGCAGGAGCTCGAATTGAGCAACGATACGTTCAACGCTGCTAAACAAATTTACGATGAGAACAACATGGCGGATATCGTAGCGCGTATTTCGTCCAATAAAACTCAAGATTCGCTTCCGCTGCCTGATTTATCGTTAAGCTCAATTCAAAATGCTGTAGAAGGTGGTTTATGTTTAAACGGGGATTTGTTGGCTACTACCGATACAACACCGCAAAGCTTCTACTTCTCCCCTGATACATTGAACATGAACCCTGGGGAACAAACCCTTGATGAAACGGACTTAATTTGTATCAATTGTAATCAGGTGTTTAACTCTATAAAAGTGTTTAAGGCACATGAGTGTGGTAAGAAATTGTTGGATGAACCACTTCCACCGGAGGAAGAGAAGGAGTCACCACCAGTTGAAAAGAAAAAACCCGTATTCGAGTGCCATCTTTGTAAACTAACTTTTCCAAATCGTAATTGGTATAAACGGCATTTGGAGTCGCATGCCAAGGATGGTTCTATGAACACGTGCTCGTATTGTAAGAAGGAGTTTAAGAAGCCGTCGGATTTGaaaCGCCATCTTCGGACTCATACAGGAGAAAAACCGTACGCCTGCAAAAAATGCGACAAGAAATTTGCGTTGAAATCCACCCTAGATTCTCATACACGTACTCATGATTCCACTAACAAGTATGTGAATTGTGACGTTTGCAACGCGGTTTTCACAGCTAAGAGTAGCTTAAAAGTCCACATGTTTATACATGAAAAGAAAAAACCGTACATTTGCAATTTTTGCCCCTCGTCCTTCCGTACAGCTGCCCACAGGCGCGTCCATGAGCGCTCACAACACGTGGCGAAAGACAAGCCAAAGAAACAACCAAAAGACGTGAAGATAACAGATTTACTTGAGACCATAACCGAACAAGTTGCTCAAAGTTTGAACAATCCAGAAGCTCCAAAAGAGCCACTTGAACTCCTTCAACCACCACCACCAGTTTCCGATGAGGAAGCTTTGAGTTTACTCAACTTAAATACAACTGATTCCTTAGGAGAATCCATTCAAATCGATCCAGTAATTCTACTTCAACAATTACAAgccaataatattttagtaaatgaTGGTGCGGATAACGATATGATGCCTCCAAGTTTGCTGCAGTTGGACGATGTCGCCCTGTTGAATTTCAAGTCGGTGGATGGTTTGATGGAAATAAAGAACGATTTGTTGGAGGTGCCAGAGCCGAAGGAAAAACCCAAAGAGTTCCAATGTGACGTTTGTTTTAAGCAGTATTCCTCGAAGGGTGTTTTGAGGCGACACAAGAAAATTCACGAGAGGCAGCGGCAGTATTCCTGCGATACGTGTATTAAAGGTTTTAATAAACCTGAGGAATTGGAGAAGCATTTGTTGGTGCATTCGGGGATTCGACCGTATTCTTGTATGTTTTGTAATAACGCGTTTGCGGAGGAGCAAAGTTTGAAGACTCATATGAAAAGGATACATAATGTGGATGGCGAGGGGACTCTAGTTGTATTTTAA
Protein Sequence
MDSDQLQAILTIPDDTFNLNTELNETVTAYFKDSSIEGATENKQIFYITSNNQFPLTQMSNLIHVPRQQIYLKPPSKLQEEIQPSPVMTPYKCIKCNKEFDTIALYKKHMLWHRNTKKYPCSKCSQGYNNERNLIIHMATHPEGKPTCPVCNLSFQRLASLKSHLMLHQVDEGFVCEECKAEFDKEDELIKHMELHIKLNEEPPNLICPYCKVSHENPIEYKKHISQHVKLRKMVLKGKRFKKKPASKMQNKHVCVICSKSFIKASLLERHLRIHTGEKPFVCRVCNRGFTQNGTLRIHMKTHIDSRPYHCTLCPARFTQKGNLKVHIDKTHTAASIGSKIYKCTLCMCIFKKVGSLNTHMSRFHSENIGMVMDKLKELEEQLNPSKPKKDVLEKPPPALGDTQKEEQDEVVDSGLVRLTESGQDGTIKRHLVKRERVGVVWWYCCSYCSKKCKKPSDLIRHFRVHTKEKPFQCQDCGVTFTLKSTLVSHMKTHAALKEYKCGKCEAVFTCVRSLSLHLSKHEKMYTTNYQCNICNKMYGSLEEVSLHRVSDHLDDSKPLENLVKVVLKRPVHEPQPGVINPAKPRNSLINLPIKANNADTPRPFQCTICDARFTRQINLKRHVKVHENDRQYKCDMCPRAFISSYRLTEHLKYHNNIRKFECQICQKKFVTSTLLKRHVSSHSSKRPYTCPYCSKKFKSLMLTKTHIRRVHKLQITQTLAEDKDENPDSCEALSTDLDKTTGDTSLISPENTTVKISIGTTDSPSDSSNVVVGLSEQFFQIPQNTLQILNQNVEEQNQPQPDPQVFQTIYVNYDDLQLTDSELCNNVLGQIKLHNADSLLLNAALEDTTVIFNIDATKLQQELELSNDTFNAAKQIYDENNMADIVARISSNKTQDSLPLPDLSLSSIQNAVEGGLCLNGDLLATTDTTPQSFYFSPDTLNMNPGEQTLDETDLICINCNQVFNSIKVFKAHECGKKLLDEPLPPEEEKESPPVEKKKPVFECHLCKLTFPNRNWYKRHLESHAKDGSMNTCSYCKKEFKKPSDLKRHLRTHTGEKPYACKKCDKKFALKSTLDSHTRTHDSTNKYVNCDVCNAVFTAKSSLKVHMFIHEKKKPYICNFCPSSFRTAAHRRVHERSQHVAKDKPKKQPKDVKITDLLETITEQVAQSLNNPEAPKEPLELLQPPPPVSDEEALSLLNLNTTDSLGESIQIDPVILLQQLQANNILVNDGADNDMMPPSLLQLDDVALLNFKSVDGLMEIKNDLLEVPEPKEKPKEFQCDVCFKQYSSKGVLRRHKKIHERQRQYSCDTCIKGFNKPEELEKHLLVHSGIRPYSCMFCNNAFAEEQSLKTHMKRIHNVDGEGTLVVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-