Basic Information

Insect: Pediacus dermestoides
Gene Symbol: clz9
Assembly: GCA_963942485.1
Location: OZ012625.1:41350534-41353134[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.2e-08 1.1e-05 25.4 0.0 5 45 1 40 1 40 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.2e-08	1.1e-05	25.4	0.0	5	45	1	40	1	40	0.94

Sequence Information

Coding Sequence: ATGCTTCGAGCCTTAGAGGCAGTTAAGTCTGGGATGCCAATTTCGACAGCTTCGAAAAGCTTTCATGTTCCTAGAACTACATTGCTTTACAAACATAAAGGAAAATATCCGGTTAAACGTAAAATGGGCCCTGATACAGTTTTATCTGAAGAAGAGGAAAACGCATTAGTGCAATGGATGTTTCACACTGCAAAAGCAGGTTTTCCAGCAACAAAAGAACAGTTATTAGACAGTGTGCAGTTATTGCTTAAAGATACGAAAAAGAAGAATCCTTTTGCAAATGATAGACCTGGAAGACATTGGTTTGAAAGCTTTAAAAAAAGGCACCCTGAAATATCCATGCGCACAGCATCCAATATTTGTGGTTCCAGAGGTGAAGTAACGAATgttaatatcaaaaattggttcaatgaaataaaaatattttttgaatgtgAAGGAATTTTAGATGTTTTATCCAACGAAAATAGAGTCTTTAATGTAGATGAAACGGCATTATTTTTATGTCCAAAAGGTGATAAAGTTATTGTCCAAAAGGGGCAAAAAAgcgtttataattttaaccaAAATGACGAAAAGGAATGCTTAACTGTTCTTCTCGGTGGCAACGCAGCAGGTCTCCTAACACCGCCCATGATAATTTTTGCTTATGAGAGAATTCCGTCATCTGTTGCTTTTTCATTGCCCGACAGTTTTTGTGTTGGAAAAAGCGAAAATGGTTGGATGACCAGcgctaatttttttgaatatataGTCAATGTCTTCCATCCTTGGGCGCAAAGTCAAAATATAGAGTTCCCTATCATTCTTTTTGTTGATGGACACAAGTCACATCTAACTCTGCCACTCAgtgaattttgtacgaagaatggTATTGTATTAGTAGCTCTATATCCCAACGCAACGCACTTGTTACAACCGATGGATGTTGCTATATTTAAACCATTGAAGTCCGCTTGGAAAAAATCTGTTTTAgagtttaaaatacaaaataacgcTAGAAAACTTAGAAGAGATGATTTTGCCCCTCTTCTTCATAAGACGCTAAAAAGTACGTTAAAACCAGAAATGTTTAAGAATGGATTTCGTCGTTGTGGTTTATGTCCCTTTGATGCAGATTTGGTTGACTACTCAAGAATTTTGTCTAAGACGCTTGATGCCTCGCTTGATGCAGTTGATAAAAATTCTACCGAAAAAGAAAGTAAAAGAAAAGTACTAAGTTATGTTGAAAATAAACTTGCAGACAAATTAAAACTCTTTAGGAAATGCAATAGTGAATTATGGAATGGTGATGTGCAAGATCGGTCATTATATGAATTTTGGAAAACATTACGAAGCGAATGTATCCCTGGTGAAGTTGAAACCGTTACTGAAGATGAAGAcaacaataaagaaaataaggATTGGACAGACCTTGACATGTTACTGCAACGCAATGATATTATTGATTGTGCCATAAATGAAAGCGGCCATTTAATTGTTATGCCTTCCGagattaatattgatttaccCCATTGTGATAAAATGTTACCTGATACAACCAAAGATATTTCTGGTAATGAACTTTGTGATATAGATAAAACCAAAGATATTTCTAATAATGAACTTTGTGATAAAGATGACGTTCAAGAAAAAGAAAGTACAATTAGAGAGATAAGACTAAATAACGAGAACCAGAAAAAGAATTCAAAGAATGTAGATAATGTGGAAGTTCTAGAAAATCAAGTAGAAAATCAAACTTGTTCTGCCTATAATAATACAAGGACTCCCAAGtctaacgaaaatattgatgCTTCCTATACGAGTATTGCTCAAGAAAATAGTGAGTCAATAACTGTTtctaacgaaaatattgttatgtcatgtgataaagataaaaaaacaaagaatattACTAAATCATCAACTACACcttccaaaaatattgatactcCTGAAGAAAACAATACCCCATATAAGTCATCAATAGTACATAGCGAAAATATTGACGTCCCAAGTACTAGTACGGCTCAAATAAATTATGCAGATCCAAATGTTCCATCACCTTTTAaaagaatattattttggcCTTCTGATGAAAATAAGGAAGTGAAGAAACGTAAAAGAGAGAAGATTCCATCTGTTGCTACGTCTAAGGAATGGCAggaatattatacaaaaaaagaaacaGCAAAGAAGCAAATTGAAGAAGAAAAATTAGAAAGAAAAAGGAAGAGAGAAGAacggaaaaaaagtttacaaacttcacaaaattcaaaatccaAAACAGCGGAAAATAATAGTAGTGATTCAGATGAATCTACAAAAAGTCTTCCCTCTTTAAATACTTCAAATAGAGATAGCCCAAAGAATTTGAAGCTATATGATTATGTTATtgttaaatacaataaaaattactacCCTGGAATTGTTGAAGAAATAAGCGATGATGAAGTTTTTGTCAGTGCAATGACATGTAGTAAGAAAAATTGGAAATGGCCAATGCCCCCAGATAAAGTCTGGTATAATATAAACGACAATgtgttgaaaattataaagaaaccGGAACCTGTGGGCAATAGAGGACTGTATGTTGTGCctgaaatgaaaaattataaataa
Protein Sequence: MLRALEAVKSGMPISTASKSFHVPRTTLLYKHKGKYPVKRKMGPDTVLSEEEENALVQWMFHTAKAGFPATKEQLLDSVQLLLKDTKKKNPFANDRPGRHWFESFKKRHPEISMRTASNICGSRGEVTNVNIKNWFNEIKIFFECEGILDVLSNENRVFNVDETALFLCPKGDKVIVQKGQKSVYNFNQNDEKECLTVLLGGNAAGLLTPPMIIFAYERIPSSVAFSLPDSFCVGKSENGWMTSANFFEYIVNVFHPWAQSQNIEFPIILFVDGHKSHLTLPLSEFCTKNGIVLVALYPNATHLLQPMDVAIFKPLKSAWKKSVLEFKIQNNARKLRRDDFAPLLHKTLKSTLKPEMFKNGFRRCGLCPFDADLVDYSRILSKTLDASLDAVDKNSTEKESKRKVLSYVENKLADKLKLFRKCNSELWNGDVQDRSLYEFWKTLRSECIPGEVETVTEDEDNNKENKDWTDLDMLLQRNDIIDCAINESGHLIVMPSEINIDLPHCDKMLPDTTKDISGNELCDIDKTKDISNNELCDKDDVQEKESTIREIRLNNENQKKNSKNVDNVEVLENQVENQTCSAYNNTRTPKSNENIDASYTSIAQENSESITVSNENIVMSCDKDKKTKNITKSSTTPSKNIDTPEENNTPYKSSIVHSENIDVPSTSTAQINYADPNVPSPFKRILFWPSDENKEVKKRKREKIPSVATSKEWQEYYTKKETAKKQIEEEKLERKRKREERKKSLQTSQNSKSKTAENNSSDSDESTKSLPSLNTSNRDSPKNLKLYDYVIVKYNKNYYPGIVEEISDDEVFVSAMTCSKKNWKWPMPPDKVWYNINDNVLKIIKKPEPVGNRGLYVVPEMKNYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -