Pder018185.1
Basic Information
- Insect
- Pediacus dermestoides
- Gene Symbol
- clz9
- Assembly
- GCA_963942485.1
- Location
- OZ012630.1:14530858-14534393[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-09 1.1e-06 28.7 0.0 3 45 12 53 10 53 0.93
Sequence Information
- Coding Sequence
- ATGgagaccaaaaaaattttaaagtatgaaGAACAAGACATGCTTCGAGCCTTAGAGGCAGTTAAGTCTGGGATGCCAATTTCGACAGCTTCGAAAAGCTTTCATGTTCCTAGAACTACATTGCTTTACAAACATAAAGGAAAATATCCGGTTAAACGTAAAATGGGCCCTGATACAGTTTTATCTGAAGAAGAGGAAAACGCATTAGTGCAATGGATGTTTCACACTGCAAAAGCAGGTTTTCCAGCAACAAAAGAACAGTTATTAGACAGTGTGCAGTTATTGCTTAAAGATACGAAAAAGAAGAATCCTTTTGCAAATGATAGACCTGGAAGACATTGGTTTGAAAGCTTTAAAAAAAGGCACCCTGAAATATCCATGCGCACAGCATCCAATATTTGTGGTTCCAGAGATGAAACGGCATTATTTTTATGTCCAAAAGGTGATAAAGTTATTGTCCAAAAGGGGCAAAAAAgcgtttataattttaaccaAAATGACGAAAAGGAATGCTTAACTGTTCTTCTCGGTGGCAACGCAGCAGGTCTCCTAACACCGCCCATGATAATTTTTGCTTATGAGAGAATTCCGTCATCTGTTGCTTTTTCATTGCCCGACAGTTTTTGTGTTGGAAAAAGCGAAAATGGTTGGATGACCAGcgctaatttttttgaatatataGTCAATGTCTTCCATCCTTGGGCGCAAAGTCAAAATATAGAGTTCCCTATCATTCTTTTTGTTGATGGACACAAGTCACATCTAACTCTGCCACTCAgtgaattttgtacgaagaatggTATTGTATTAGTAGCTCTATATCCCAACGCAACGCACTTGTTACAACCGATGGATGTTGCTATATTTAAACCATTGAAGTCCGCTTGGAAAAAATCTGTTTTAgagtttaaaatacaaaataacgcTAGAAAACTTAGAAGAGATGATTTTGCCCCTCTTCTTCATAAGACGCTAAAAAGTACGTTAAAACCAGAAATGTTTAAGAATGGATTTCGTCGTTGTGGTTTATGTCCCTTTGATGCAGATTTGGTTGACTACTCAAGAATTTTGTCTAAGACGCTTGATGCCTCGCTTGATGCAGTTGATAAAAATTCTACCGAAAAAGAAAGTAAAAGAAAAGTACTAAGTTATGTTGAAAATAAACTTGCAGACAAATTAAAACTCTTTAGGAAATGCAATAGTGAATTATGGAATGGTGATGTGCAAGATCGGTCATTATATGAATTTTGGAAAACATTACGAAGCGAATGTATCCCTGGTGAAGTTGAAACCGTTACTGAAGATGAAGAcaacaataaagaaaataaggATTGGACAGACCTTGACATGTTACTGCAACGCAATGATATTATTGATTGTGCCATAAATGAAAGCGGCCATTTAATTGTTATGCCTTCCGagattaatattgatttaccCCATTGTGATAAAATGTTACCTGATACAACCAAAGATATTTCTGGTAATGAACTTTGTGATATAGATAAAACCAAAGATATTTCTAATAATGAACTTTGTGATAAAGATGACGTTCAAGAAAAAGAAAGTACAATTAGAGAGATAAGACTAAATAACGAGAACCAGAAAAAGAATTCAAAGAATGTAGATAATGTGGAAGTTCTAGAAAATCAAACAGATGATGATGCCTTAACCATGGCACTAAAATGCACTTga
- Protein Sequence
- METKKILKYEEQDMLRALEAVKSGMPISTASKSFHVPRTTLLYKHKGKYPVKRKMGPDTVLSEEEENALVQWMFHTAKAGFPATKEQLLDSVQLLLKDTKKKNPFANDRPGRHWFESFKKRHPEISMRTASNICGSRDETALFLCPKGDKVIVQKGQKSVYNFNQNDEKECLTVLLGGNAAGLLTPPMIIFAYERIPSSVAFSLPDSFCVGKSENGWMTSANFFEYIVNVFHPWAQSQNIEFPIILFVDGHKSHLTLPLSEFCTKNGIVLVALYPNATHLLQPMDVAIFKPLKSAWKKSVLEFKIQNNARKLRRDDFAPLLHKTLKSTLKPEMFKNGFRRCGLCPFDADLVDYSRILSKTLDASLDAVDKNSTEKESKRKVLSYVENKLADKLKLFRKCNSELWNGDVQDRSLYEFWKTLRSECIPGEVETVTEDEDNNKENKDWTDLDMLLQRNDIIDCAINESGHLIVMPSEINIDLPHCDKMLPDTTKDISGNELCDIDKTKDISNNELCDKDDVQEKESTIREIRLNNENQKKNSKNVDNVEVLENQTDDDALTMALKCT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01163044;
- 90% Identity
- iTF_01163043;
- 80% Identity
- -