Pder009572.1
Basic Information
- Insect
- Pediacus dermestoides
- Gene Symbol
- clz9
- Assembly
- GCA_963942485.1
- Location
- OZ012627.1:4394079-4395500[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-09 8.7e-07 29.0 0.0 3 45 12 53 10 53 0.93
Sequence Information
- Coding Sequence
- ATGgagaccaaaaaaattttaaagtatgaaGAACAAGACATGCTTCGAGCCTTAGAGGCAGTTAAGTCTGGGATGCCAATTTCGACAGCTTCGAAAAGCTTTCATGTTCCTAGAACTACATTGCTTTACAAACATAAAGGAAAATATCCGGTTAAACGTAAAATGGGCCCTGATACAGTTTTATCTGAAGAAGAGGAAAACGCATTAGTGCAATGGATGTTTCACACTGCAAAAGCAGGTTTTCCAGCAACAAAAGAACAGTTATTAGACAGTGTGCAGTTATTGCTTAAAGATACGAAAAAGAAGAATCCTTTTGCAAATGATAGACCTGGAAGACATTGGTTTGAAAGCTTTAAAAAAAGGCACCCTGAAATATCCATGCGCACAGCATCCAATATTTGTGGTTCCAGAGGTGAAGTAACGAATgttaatatcaaaaattggttcaatgaaataaaaatattttttgaatgtgAAGGAATTTTAGATGTTTTATCCAACGAAAATAGAGTCTTTAATGTAGATGAAACGGCATTATTTTTATGTCCAAAAGGTGATAAAGTTATTGTCCAAAAGGGGCAAAAAAgcgtttataattttaaccaAAATGACGAAAAGGAATGCTTAACTGTTCTTCTCGGTGGCAACGCAGCAGGTCTCCTAACACCGCCCATGATAATTTTTGCTTATGAGAGAATTCCGTCATCTGTTGCTTTTTCATTGCCCGACAGTTTTTGTGTTGGAAAAAGCGAAAATGGTTGGATGACCAGcgctaatttttttgaatatataGTCAATGTCTTCCATCCTTGGGCGCAAAGTCAAAATATAGAGTTCCCTATCATTCTTTTTGTTGATGGACACAAGTCACATCTAACTCTGCCACTCAgtgaattttgtacgaagaatggTATTGTATTAGTAGCTCTATATCCCAACGCAACGCACTTGTTACAACCGATGGATGTTGCTATATTTAAACCATTGAAGTCCGCttggaaaaaatatgttttagagtttaaaatacaaaataacgcTAGAAAACTTAGAAGAGATGATTTTGCCCCTCTTCTTCATAAGACGCTAAAAAGTACGTTAAAACCAGAAATGTTTAAGAATGGATTTCGTCGTTGTGGTTTATGTCCCTTTGATGCAGATTTGGTTGACTACTCAAGAATTTTGTCTAAGACGCTTGATGCAGTTGATAAAAATTCTACCGAAAAAGAAAGTAAAAGAAAAGTACTAAGTTATGTTGAAAATAAACTTGCAGACAAATTAAAACTCTTTAGGAAATGCAATAGTGAATTATGGAATGGTGATGTGCAAGATCGGTCATTATATGAATTTTGGAAAACATTACGAAGCGAATGTATCCCTGGTGAAGTTGAAACCGTTACTGAAGATGAagacaacaataaataa
- Protein Sequence
- METKKILKYEEQDMLRALEAVKSGMPISTASKSFHVPRTTLLYKHKGKYPVKRKMGPDTVLSEEEENALVQWMFHTAKAGFPATKEQLLDSVQLLLKDTKKKNPFANDRPGRHWFESFKKRHPEISMRTASNICGSRGEVTNVNIKNWFNEIKIFFECEGILDVLSNENRVFNVDETALFLCPKGDKVIVQKGQKSVYNFNQNDEKECLTVLLGGNAAGLLTPPMIIFAYERIPSSVAFSLPDSFCVGKSENGWMTSANFFEYIVNVFHPWAQSQNIEFPIILFVDGHKSHLTLPLSEFCTKNGIVLVALYPNATHLLQPMDVAIFKPLKSAWKKYVLEFKIQNNARKLRRDDFAPLLHKTLKSTLKPEMFKNGFRRCGLCPFDADLVDYSRILSKTLDAVDKNSTEKESKRKVLSYVENKLADKLKLFRKCNSELWNGDVQDRSLYEFWKTLRSECIPGEVETVTEDEDNNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01163043;
- 90% Identity
- iTF_01163043;
- 80% Identity
- -