Pder015058.1
Basic Information
- Insect
- Pediacus dermestoides
- Gene Symbol
- retn
- Assembly
- GCA_963942485.1
- Location
- OZ012629.1:4400409-4429702[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-26 6.6e-23 81.4 0.0 2 89 30 115 29 115 0.96 2 2 2.1 7.2e+03 -2.1 0.0 21 38 234 254 212 258 0.53
Sequence Information
- Coding Sequence
- ATGGCCGATGTTTTAACACCACATTACAAGCGATTACGACGGGATGCTACACCACCTTTTCTGTACGAAATCAATGACGACCCCAGACGGAAAGAGTTTCTGGATGACTTGTTCTCCTATATGCAAAGACGGGgtTCACCAATTAACCGACTGCCCATAATGGCAAAATCAGTGCTTGATCTCTACGAATTGTACAATCTGGTGATTCAAAGAGGTGGTTTAgtcgaagtaataaataagaaattatgGCAAGAAATCATTAAAGGTCTCCATTTACCATCATCCATAACATCAGCTGCATTCACCCTTCGGACACAatacatgaaatatttatatccaTACGAATGCGATAAACTCCATCTCAGCAACCCTGTAGAACTACAATCCGCCATCGATGGCAACAGACGCGAAGGCCGCCGCAGCAGTTACGGCCAATACGATGCAATCCAAAGATCTCCAACAAACCCAACGCACCAAATGTCGTCAATGTCCTTAGTGTCCCAGCACCAACAAATGGCCCGTTTAAGCTCGGTGATAAACAGCGGATTGGGTATGCACAATGGTATCCAACATGCCACCCATGCTCAGAATATTTTACCACCGTTAAATGGGGGTGCACTGCCGCCAGAACTTGAGGCACACATGGCAGAATATGTCAGATTACTTCGCGGTACTAATACCCCACCACGACCAAATGCGACTAGCCCTCCAAATGCCGCTGCGATGGAATTTAATCGGATGGCGCTGTGGAatctttacaataataatgtcCAAGCACCGATTGAGCCCCAGAAGGAGGCTCTTAATTTGGCGGATGTAGCACCTGCTCCTCCGGCTGTGAAACGCAGTGTTTCAGATGCGGGTGTGTCACCGCCGCCTAAGAAGTACAAGGATCTGGTGGAGCGTCCCACTAAGTCGTCCTCCCCAATGTCTACACATATCAAAATAGAGAATAGAGGCGACACCCAGAACGGAGACAAATCCTTAGTGGTGAGCATGGAGATGAACGGCATCACTTACCAAGGGGTGCTTTTCGCCCAACATACCACCGGACCTAGTGGTGGAGCCAGCAACGGGACCAGTAGCCGTCCTCCCATGGCTTAA
- Protein Sequence
- MADVLTPHYKRLRRDATPPFLYEINDDPRRKEFLDDLFSYMQRRGSPINRLPIMAKSVLDLYELYNLVIQRGGLVEVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDKLHLSNPVELQSAIDGNRREGRRSSYGQYDAIQRSPTNPTHQMSSMSLVSQHQQMARLSSVINSGLGMHNGIQHATHAQNILPPLNGGALPPELEAHMAEYVRLLRGTNTPPRPNATSPPNAAAMEFNRMALWNLYNNNVQAPIEPQKEALNLADVAPAPPAVKRSVSDAGVSPPPKKYKDLVERPTKSSSPMSTHIKIENRGDTQNGDKSLVVSMEMNGITYQGVLFAQHTTGPSGGASNGTSSRPPMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -