Pder013270.1
Basic Information
- Insect
- Pediacus dermestoides
- Gene Symbol
- Xbp1
- Assembly
- GCA_963942485.1
- Location
- OZ012628.1:6673712-6675869[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-15 3e-12 46.8 13.3 2 64 16 78 16 79 0.96 2 2 9.6e-05 0.091 13.2 3.7 26 55 54 83 53 90 0.92
Sequence Information
- Coding Sequence
- ATGCCGATGAGGGCCAAGAAAAGGCGACTGGACCATTTGTCCTGGGAGGAAAAGATTCAAAGAAAaaaactaAAGAACCGCGTGGCCGCCCAAACATCCCGCGACCGCAAAAAAGCCAAAATGGACCAAATGGACGCAGCCCTCCAAGAGCTCTTCGCCAAAAACGAGGCCCTCCTGTCAGAATGTGAGAATCTCAAAGCAGCCAATCAAAAACTAACAGAAGAGAACACAGACCTACAAAATCGACTAAGATTGCCATGTGTCAATTGCAATCAAAACCGGACTGTCGAGAACGGTCACACACTCAGCAGCGGTTTTGAGCAGCAAACAGACACATCAAGCATTCTTGAAGATGGTGCTGGCCTGCCTTCTCTACCAGACCTGCTCGATGAACTCAACTATGACGTCGACATCAACTCATTGGAACAGCTCACACAAAGTCTACTCCAAGATATCGCCAGAGACTTGGAAGCAGCTGCTCAAAAAGCAGATTCTGAAGAATCAATTACTGATAGACAAGAAAATCCTAAACAAGTGGTGGGGCCGCCACCAGAAAACATGGAATCCAGTGGACGTGAAGTGCTGAAGGAAAAGTCTTTGGAAAAAGACATTTCGGACTACCTACTTTTACATCATAactattttgcaaaaaaaccacTAACGAAATCTTCACGCTCGAAACCaaagttcaaacaaatcaaaccgaaaataaaaaaacccgCAGCACCAATTGTCGTCGCTGAAGAACCCGAACCGGAAGTTATTTATGGGACATTTGACGAAACAacgaactgcattacaattaTAGTCAATGAAGATGGGGTTCCACTAACCGAAGAAGAAGTAGTTATGGAGGATAATTCGTCTTCAATTGACCACAATTGTTTGGCAGTTCCCACTGCGGATGTCAAATGTATTTCCTCACCTTCCGGATCCGATCATGGGTATGAGTCGTTGGGCTCACCAAATAGCTCTTCCGATGATATTTGGGATGAAAGCATGTCGGAATTATTTCCATCTTTACtttag
- Protein Sequence
- MPMRAKKRRLDHLSWEEKIQRKKLKNRVAAQTSRDRKKAKMDQMDAALQELFAKNEALLSECENLKAANQKLTEENTDLQNRLRLPCVNCNQNRTVENGHTLSSGFEQQTDTSSILEDGAGLPSLPDLLDELNYDVDINSLEQLTQSLLQDIARDLEAAAQKADSEESITDRQENPKQVVGPPPENMESSGREVLKEKSLEKDISDYLLLHHNYFAKKPLTKSSRSKPKFKQIKPKIKKPAAPIVVAEEPEPEVIYGTFDETTNCITIIVNEDGVPLTEEEVVMEDNSSSIDHNCLAVPTADVKCISSPSGSDHGYESLGSPNSSSDDIWDESMSELFPSLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -