Pmau003084.1
Basic Information
- Insect
- Paykullia maculata
- Gene Symbol
- -
- Assembly
- GCA_003055125.1
- Location
- NDXZ01038454.1:1853-7587[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.014 0.93 10.5 0.1 1 21 1086 1106 1086 1110 0.90 2 8 0.016 1.1 10.3 1.8 1 23 1586 1609 1586 1609 0.97 3 8 6.3e-05 0.0043 17.8 2.8 3 23 1634 1654 1633 1654 0.97 4 8 7.4e-05 0.0051 17.6 0.6 1 23 1660 1682 1660 1682 0.99 5 8 5.8e-06 0.0004 21.1 0.6 1 23 1688 1710 1688 1710 0.98 6 8 0.11 7.2 7.6 2.7 1 23 1716 1738 1716 1738 0.94 7 8 0.0066 0.45 11.4 0.1 2 23 1745 1766 1744 1766 0.96 8 8 0.0045 0.31 11.9 2.2 1 23 1772 1795 1772 1795 0.97
Sequence Information
- Coding Sequence
- atggCTTTAAATCATAATAATTATGATGATTTGGGAGCTCCCCAGCAGCCTCAATTACCAGATCATATGAAATGTGGTGAAGTGTACACTTGGCTGTGTGCGGGAGACTTGTATGCGGTGGAATGTAAATTGTGTGAAGATCACCCATTATGTCCTCTTTCCGAATTTCCACAACATATGGATATATGGCATACAGATTGGGATAAAACCTCGAAAGGTAATCAGGAAAACCAAGAATATAATTCAGATGATGACCACGAAGATCATTTCGAAGACAATGAACCTGCTTTATCATTTACCACCGAAGACAGTGGTTTATGTGAACCAGTTGATCAGTTACAAAATGAGAGAATGTTGCAACATGAAGTAGAGCATAATTTGTATCGTCGGCATAATGAAGAGTTTTTAGAACCTTTTGAACAGGTTTTAATTGAACACGACCATGTCATAGATTCAATACAAACTAAAGAGGAGATGAATGATGAAGAAAGTTTAAATGAACATCAAAAACTGGTTGCAGATATAGAAAAAGAATTAACAGAGAACGAACGTAAGCAAAAGCcgcaaataaacataaacaattttataaatgagAGCATGTGTAAACAGAGAGAGCTAAAGGGTGAAATAACAGTAAATGAGACTGAATTACAGTCAACATTACAAGAACCATTAGACAATTTAAAAGATTCAAATGTAAACGACGACACCATTAAAATGCAATGTTTAGAAAAATCTTTAGATTTAgaaaaattcaatgaaaatattaaacaaacaccaaataaaataaggaaatctaaaagaaatttaagaagttttaaagaaattataagaaatgaagatttaaaggaaaatagtaaaaataaatcaattttaaatttagaaaattctaacaaaatttccaaaaataatcaacaaaatttAGTCAAAtcacaagaaaataaaataaatttaagaaattttgcaataaattttaacaatcaaAGGCGAATAACTAAATCTGATAGTGAAGCAAGAGCAAATGAAGACAaaATTGACGATGGTGACAGTGaaataactaaaaatgaaatagaaacaTATGAAAATGAAAGGAAAACTACAAgtgaatttgaaaaagaaacgaATGAAATAGCACTTAGAACAGGtgataattatacaaaaattaaaaatatttatcaaaataataaaaatatttgccttaagttattaaaaatcaaaatttctaagaatttgttaaaagaaaatgaaacagTGTCTTCTGAATATGAAATAAGTTGTACAAACAAAGCAAAGATTCAAAAAAGTGAAACAGAACCAAGTGAAACTGAACCAGtggatacaaataaaatccaaataaaagaaaatgaaacgaAAACAAGTGGAAATGAAGTAAAGTTCAATGAAAATGAAACAGAAGCAGCTGTAATGttagaagaaataaaattatgtgaaattgaaaacaaaagtcAAATAGAATTAGAATCcagtaaaaatttacaaaaaacaaatgaaaataatgtagaaaattttaatacaaaagaaacaaataaatcaaaggACCCTGGAACAATAACGAAAATCGATtcctttgaaaataaaatacaaataaaaacaaaaacccgaAGATCTCTTAGAAATTTAAGGAAACTTACTGGAGATATAACAAACTACAGTAAAAGCtttgaagaaataaaaagtttaaaaactgtaaagaaaaatcaaagcGAAAAAGAAGAGAATCGAGAAAAGACAAAACAAGAAGGAattaatgaaattgaaaaaggCAATTGTAGTGAAAATCCTAAAAAATCTTCTGCAACTAAAGAGACAAAATTGAAAAGAtcacaaaaaattagaataattaGCAGAAAAATGAGAGAAGGCTTAAGGAAGTACCACGAAAAGAAAATCGGAGAATCTAAGAGAAAACTTACCAATTCTAAAGGTAAAACTAAACATCTAATATCgagtttttttaaaccattacaCAAAAGAATAACTTCTAAATCAAATATAGATCTTCAAAAAGATAAAGATAAATtggaaaatgtttcaaaaaatctCTTAACAATAGAGAGAAGAGCAGAAAAATGTAAGACTTCtcaaaagagaaaattaagaaataaaaaaaatttcaaatcagGAAAAGATTTTCATAAAAAGGCAAAAGGTTTTAAATCGAATCAACGAAAATCTTTCTCAAAACTAAACTCCCTTAAAGAGGAGttgaatacaaatataaaacaaactttagttaataaatttatggcAGCTACAAATGTACTAACTAAAGAAGAAGACCAAACAGATTTGGAAGTTGCCTTAAAAAGCTTGAATAATGAAAAAGCTTTAGGAATATCACAAAATGTCTATAAAGAAACTGCTACAGCATCCGACACATTTTTAGATATTTCAAATCTTAACAGTTCCGATGGTTCAACTCCTTCCTCACCCTCCAAACTTTCCTCGCAAGGCTACTGTTCCAACAATGAAAACTCTTTATTTACTCCAAATGAACACTTGTCCTCTTTAACGCACAACATTGTAGATGAACATGAACTTTTGAGCCCTTCATCGCCCAAATCCGAAGAAGAACATTTCGAATTCTACGAACCCAAAGAGAAACTAAGTCGACATCATATAAGCCATTTAATTAAACTCTATCAGGAACATCCGCGCCTTTGGGATCAATCCCATCCTGATTTTTGTGAACCCCAAGTATGTCGCAAGTCCTGGCAACAGATCACCAATCAATGGAATGAATACTGCAAGCGAAAATTCACCACCGTCGAGGTACGCATACGTCTGGGCACTCTTTGTCAACGTTATTTACAGGAAAGAGAACGTCTGGCATTCGAAGGAGAATTGGATGAGTTTGCCAAGTTTCCCTACTACGAACAAATGAGATTTTTGGAGCAACAGAAATCTTTACAAAAACGACGTGAACTCTACGAGCAGCAGAATAAGAAAATATtggaattttatcaaaaatttcctGTGCTCTGGCATGTCAGCTGTTATAAGTTGAGACAGTCCAAAGAGAGAGCTCAGGCTTTTGAGAGTATAAGTCGATCTTTAAAAGAATGCGGCTTACATTTGTCTTCTATGGGTGTTCGAAAGCGTATGCGATCTTTGCGCAAGTGTTATCGTTTAGAGAAAATACGTTTTTTGCATGCAAAAGTAGAGCAGACGCCATTTCAGACGGACTTCAGGCATTATGAGAGAATGCAATTTTTGCACAAACATATAGATCCATTTGTGTGTCTCATCTGtggtaaaatatttgaaaatttagtaGTTTTTCGTTGGCACTTGCAAGAACAAAATCATGGTAGTGTTTTACAAGAAGAGgaggaagaagaagaagaagaagaatttGAAAGTGAGAATGAAAAAGAAGAGGTTGatgaacaagaaaaaataatcacAACAACCTTGAAATCCGAAGAGGCTTATGAAACTAATTCAACTAAAATTTTGGAAACTCGGCAAGTTAAAAACAACTCCGATTCTCCTTCTAATACATTTAACCATAGTTTCGATTTATATGCGGAATTGGAAAATTCTTCcgatattttacaaacattcaCTCCCTTATCCACAACCCCAGTTCAGGAGTTGCAATCTGCAGCACCAGGAAACGAGGAAATCGTAGATGATCATATTCCCATTATTCAAGAGGTTTTAATATTTCCTCCTAACACTTTGGCGAAACCTCTTATAGATTCTTTGCCCATCGGAGATCAACTCATTGAGaaaattatggaaaatgttTCCGGTAATGATGGCTTCTACAATCAATCTTCAAATAATTTTAACGAATCGGAATTAGGTCCAAGTAGTTGTATAACAGAGGAAACTTCCTATATGGATGTTATGACTTCAGAAAATGCTAATATTTTGCTCAATGAACAAACTTTAGATAATGGACATCAACAACCTGAAAGGATTTCCAcagaaaatCATCCCAGCCCACTTTCTTCCCTAGTAGTAAAAGTACAATGTGCCGATTTCTCTATGGACCTCAAATTAAACCCAGAGTTACCAGAAGCCTGTACGACAAACTCTAACGATTCTGATAATGAGTTGTTTACTTCCTCTGACATCTCAATCGTTCCCTTGCCCGATCATCAGATACACATAATGATTGCACTTTATCGTAAATATTCCCAACTTTGGAATCCCAATCATTTGGATTATTATTCTCGCAATTTAAGAAGGCAAGCCTGGTGTTTGCTTACGCAGGAATTTAGCACTGTCGTGGGTAAACGCTTTTCTTGGCAGACTTTGTATCGAAAGCTTACGGACTATGCCAGGTACTATAAGAAACTAATAACGCAACAAGAGGACTATGAGGAATTGGAGATTAAGTGGACATTTTATGAGGACTTTAAGTTTTTGGATGATGTGATTGCCGTCAATACGGAACTACAACGCAGCGTTCATCATCGTGacaataatttcaatattattgcCATCTACGAAACCCTGCCCCAACTATGGGACATCAAACATTCCGATTTTAATAAACGCTCTGTTAAACAACGCAACTTTGAACTAATGTGTAGTCGCCTGCAAGAGGACCACAATTTACAGTTGACGACAGAACGTCTAAAAAATCGCCTAATTGAACTACGAGCCCAATATAGGGCGGCCAAGAAACAGCGCCTTAAATGCGAAAGAAATCAACAAAGTTTTAACACTGATTTTGAATTCTACGAGGCCTTAAAATTTCTCGAACCCCACATAGATCCTTTTATATGTAGAGAATGCAAAatggattttaaaaaactaaccgACTATAATCAACATCTTAAGCGGgtacatgaaaagaaaataatatccAAAACTTCTGCCATATTCCTTGTGCCACCTCATGAAGCCGGTGTGGAAAATATCTGTCATATATGCGGCCTTAAGTTTACCACACGCGGCAATTTAGTTCATCATGTTCAACGCCATGAAGACATACGAAACTACCCGTGTCCCATGTGTCCAAAGAAGTTTTTCGCCTCCCACCCCCTTAAGGTGCACATTCGCACACATACCAAGGAATGTCCGTATACGTGTGAAAAATGTGGCATGTCTTTTGCAAGTGCCAGCAAATTGAATCAACATGCCAAGCGGCACTACGATAAGAAAGACCACCAGTGTGATTATTGCCCCAAAGCCTTTTATACGGGTTTCGAAAAGGATCGTCATGAAAAAAGACATTTGAATATTCGAGACAAAGTGTGTCCCGTATGCAGCAAAACATTTGTGGCCGGCTCATCGTACTATGCGCACATGATGTTGCACAATGATACGAAACGTTTTGAATGCAACAAATGTAATATGAAATTTGCTCAATATCCCGGCCTTTACAAGCACAAAAAGAAGCAACATTGA
- Protein Sequence
- MALNHNNYDDLGAPQQPQLPDHMKCGEVYTWLCAGDLYAVECKLCEDHPLCPLSEFPQHMDIWHTDWDKTSKGNQENQEYNSDDDHEDHFEDNEPALSFTTEDSGLCEPVDQLQNERMLQHEVEHNLYRRHNEEFLEPFEQVLIEHDHVIDSIQTKEEMNDEESLNEHQKLVADIEKELTENERKQKPQININNFINESMCKQRELKGEITVNETELQSTLQEPLDNLKDSNVNDDTIKMQCLEKSLDLEKFNENIKQTPNKIRKSKRNLRSFKEIIRNEDLKENSKNKSILNLENSNKISKNNQQNLVKSQENKINLRNFAINFNNQRRITKSDSEARANEDKIDDGDSEITKNEIETYENERKTTSEFEKETNEIALRTGDNYTKIKNIYQNNKNICLKLLKIKISKNLLKENETVSSEYEISCTNKAKIQKSETEPSETEPVDTNKIQIKENETKTSGNEVKFNENETEAAVMLEEIKLCEIENKSQIELESSKNLQKTNENNVENFNTKETNKSKDPGTITKIDSFENKIQIKTKTRRSLRNLRKLTGDITNYSKSFEEIKSLKTVKKNQSEKEENREKTKQEGINEIEKGNCSENPKKSSATKETKLKRSQKIRIISRKMREGLRKYHEKKIGESKRKLTNSKGKTKHLISSFFKPLHKRITSKSNIDLQKDKDKLENVSKNLLTIERRAEKCKTSQKRKLRNKKNFKSGKDFHKKAKGFKSNQRKSFSKLNSLKEELNTNIKQTLVNKFMAATNVLTKEEDQTDLEVALKSLNNEKALGISQNVYKETATASDTFLDISNLNSSDGSTPSSPSKLSSQGYCSNNENSLFTPNEHLSSLTHNIVDEHELLSPSSPKSEEEHFEFYEPKEKLSRHHISHLIKLYQEHPRLWDQSHPDFCEPQVCRKSWQQITNQWNEYCKRKFTTVEVRIRLGTLCQRYLQERERLAFEGELDEFAKFPYYEQMRFLEQQKSLQKRRELYEQQNKKILEFYQKFPVLWHVSCYKLRQSKERAQAFESISRSLKECGLHLSSMGVRKRMRSLRKCYRLEKIRFLHAKVEQTPFQTDFRHYERMQFLHKHIDPFVCLICGKIFENLVVFRWHLQEQNHGSVLQEEEEEEEEEEFESENEKEEVDEQEKIITTTLKSEEAYETNSTKILETRQVKNNSDSPSNTFNHSFDLYAELENSSDILQTFTPLSTTPVQELQSAAPGNEEIVDDHIPIIQEVLIFPPNTLAKPLIDSLPIGDQLIEKIMENVSGNDGFYNQSSNNFNESELGPSSCITEETSYMDVMTSENANILLNEQTLDNGHQQPERISTENHPSPLSSLVVKVQCADFSMDLKLNPELPEACTTNSNDSDNELFTSSDISIVPLPDHQIHIMIALYRKYSQLWNPNHLDYYSRNLRRQAWCLLTQEFSTVVGKRFSWQTLYRKLTDYARYYKKLITQQEDYEELEIKWTFYEDFKFLDDVIAVNTELQRSVHHRDNNFNIIAIYETLPQLWDIKHSDFNKRSVKQRNFELMCSRLQEDHNLQLTTERLKNRLIELRAQYRAAKKQRLKCERNQQSFNTDFEFYEALKFLEPHIDPFICRECKMDFKKLTDYNQHLKRVHEKKIISKTSAIFLVPPHEAGVENICHICGLKFTTRGNLVHHVQRHEDIRNYPCPMCPKKFFASHPLKVHIRTHTKECPYTCEKCGMSFASASKLNQHAKRHYDKKDHQCDYCPKAFYTGFEKDRHEKRHLNIRDKVCPVCSKTFVAGSSYYAHMMLHNDTKRFECNKCNMKFAQYPGLYKHKKKQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -