Pmau010372.1
Basic Information
- Insect
- Paykullia maculata
- Gene Symbol
- -
- Assembly
- GCA_003055125.1
- Location
- NDXZ01016354.1:6016-11843[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.65 45 5.2 0.8 1 23 297 320 297 320 0.93 2 13 0.013 0.89 10.5 1.2 2 23 395 417 394 417 0.95 3 13 0.0001 0.0069 17.1 3.2 2 23 812 833 811 833 0.97 4 13 0.00014 0.0098 16.7 3.1 1 23 839 861 839 861 0.97 5 13 2.4e-05 0.0017 19.1 1.5 1 23 869 891 869 891 0.99 6 13 0.0013 0.088 13.7 1.1 1 23 897 920 897 920 0.97 7 13 0.002 0.14 13.1 2.0 1 23 1082 1104 1082 1104 0.98 8 13 0.04 2.8 9.0 0.8 3 23 1112 1132 1110 1132 0.97 9 13 0.0032 0.22 12.4 6.6 1 23 1138 1160 1138 1160 0.98 10 13 1.2e-07 8.2e-06 26.3 0.1 1 23 1166 1188 1166 1188 0.99 11 13 0.00045 0.031 15.1 5.0 1 23 1194 1216 1194 1216 0.98 12 13 0.00029 0.02 15.7 4.0 1 23 1224 1246 1224 1246 0.99 13 13 0.0001 0.0069 17.2 0.5 1 23 1252 1275 1252 1275 0.97
Sequence Information
- Coding Sequence
- atgatcAACACTTTGCTGGAGCATGTGCCCATTAAAATTGAAGTCAAAGATTTGGAAGAGGAGAGTAAAGGTAATCGCGTAAAAAAGGCACCTGAAGCGAAAGTGTCGAAAGATAATACTATGGATGAAACCGATAAAGATTTGGTTGATGATGATGAGGACGTCgatgattatgatgatgatTACGAAGATGAGGAAgaggatgatgatgatgaagaagaagaagagTCTGAAACGGAAACAGATGCATTGGAAATCTTAAAAGAAGCCACTTTATTAATTAGCAGTGATGAAGAGGCTGAGTTAGAGGCTCAAAGAATACGTTTTCCCGATAAATTTATTACCAAGAAAATACGCCGCGATTCAAATTTATCTTCACGCAGCTCCTCCAGGAATAGCCAAACTAGTAATGCCTCTCGTGcacaaatttcaaaagaaatatctACAAAAGACACCAGGGAGGAAATAGAAAAGTCACAAAGAATATCACCTCTCCTTAAGACCacggaaaaagaaaaaactctaGAGAGCCAAACAAAAGagaacaacaataacagcaacacaAACATACTCATGCAAACTAACAAGAAAACCGAAAAACTAAAGttggaaaataacaaaaacaaacatttagagGCAGGCAAAATTGTAGAAAACAATAAATCAGCTGCAGACTGTCTAAATGGAAATACCGAAAACAATcgtaatattgaaaatttacgGAAGTCACCAGCAAATGTGCCAGGCAGCGGTGGCGGTGGTGGTACAAAAAGTCGTCGCGGCAGTAATAATTCCACCTGCAGTGTGGCATCTACGGTGGCCTCTGATTCTGCCGAAACTGAGTCCTGTGGCAACATCTACGTTTTTAATTTGcagcaaaaacttattttcaattGTGAATTTTGCGATTTAAAATATGGTGAGTTGGATAATTTCGGCCGTCATCTTCACGAAGCTCATAAAATTTTCAACTTGGATGAGGACCCTGAAAAAGAAAATGCGCCACGAAACTTGCGCAATCGCAATAATGCGCCAAAAAATGCCGGCAATGTTAAGAAAGAACCCCTACAATGTTTAGTTACGTTGGCTGAACCACCTGTTACTCTGCCGGTCTCTGTACTGGCTGAGCCTTTAGATTCGTGTGGCAATGTGTTTATACTTAATCATCGTAAATTGTTTTTGGTCTGTGGCTATTGTGAGTGTAAATATGCAAATTTGGATTTATTTGAGAAACATTTAAGACAACAACATCGCATTTTTGAGGGCTGTCGCAATGAGGTGAATGTAGTGCCCAAGGTTGAAGTGAAAGAAGAGATTATTGCCATCTCCGAGGTGGTGCCACAACAGGGTATAATAGCACCCCAGGCCATGGTAGCTATACCGGCTGAGATTCCTTTAGATATAAGTATAACACCGGAAAATGTGGCACAAACTGAAGAAGCTTTAAAGGAATTAAGTGCAACAGAGGAGACAAAACAAACTGAGACGACAATTACAGAATCTTCTACAAATCcagaaaatactttaaatgttgaaaattcCTCACAAACTGCTGTTTCTGATCAAACCGAAGTTCCTTTGGCTGAAGTTGTTTCTAATGATGAAAATTTATTGGAACCTATGGCTATTGAACAACCAGCTTCACCCAAAAAAACCAAAGCTAAAAGACGTTTCTCTCCTGTTAAACCAGAAACAACTGTTAATAAGAGACCCAAACGAAATACTAGGAATAACACAAAAGCTAAAGAGGAGCCCATTTCCATGACTGTGGAGGAGAATATTCCTGAACAATCAATAAAATCTCCTGCACCAACAATTTTAGCTGAAGAAACAGATAAAATCGACGAATCTGTAGCAACTGCAGAAAGTAAGGACAACAGAAAATCTTCCGAAACAACAGAAGATAAAAAACCCACTACTCTAGAAATAAAGGACCCAGAAGAAAGCAATTTATGCACTGACACACAAGAATCTAAAAAATTAACTGCTGTAAAATCGAAAGAAGTCAAGAAACTCACAAAATCTAcagaaacaaagaaaacattagTTGtagaaactaaagaaaaaagaaagtcATTTAAAACAAGAGAATTAAAGAAATGCCCAAGCCCTGCAGAAACCATACAAACTAAAGACAGAAGAAAGTCACTAAAATCAAAGGAATCTACCAAATCAATTGATACAAAAACtgtggaaataaaaaatttgagagAGACAAGAAAATCGAAAAAATCGTTGGTGGACAAGGAGACAGCAAATACAGTAGAGACCACTGAAACGGAAGAAGGCAAAAAGTCCACAAAGATTTTAGATCTCCCCATACAAGAAAAGGAAAATGCACAGACCAAACAAACCAGAAGTTCCGCAAAATCACCTGAATTTAAAGAAACACCTGAACCTGCAGTTGAAAATGAAacggaaaaaaaacaacaacagtgtACCAAGTGTGAAAAGACATTTGCTCGCAAGGAATGTTTGCGAATACACGAACGAGTTCATACTGGCGAAAAGCCTTTTATATGCGAAATTTGCCATAAAAGTTTTCGGGCTAAACAAAATCTTAGCATACACAAAAGGTATCATCTGGGCGAGTCGTCGCGAACTTTTAAATGTGAACAGTGTGATAAGAAATTTTGGCGCAATACCGACCTCAAGGTGCACATAAGATCACACACGGGCGAAAAGAAATTCCAGTGTGGCATTTGTCTGCACAGTTATTCGTCCAAAGTCAATGTACAGAAGCACATTGAAAGAGACCATTTACCGGCGGACGGAGTAGCGGGTAAACCGCCTAGAGGCAAAAAGAGAAAGGGGCAAAACTACAAGGTTCTTCAGGAAGAGTTGgagtatcaaataaaaattattgaagagTTGCAAAAAgcgaaaaaggaaaaagaaactAACACACCCGTGTTGCTTACAGCACAGGTGGCACAAATGCCCCAGCAAAGTATTCATTATGAAGTGTCGGAACAGGAACAGCTTATGCAAGATTTTAATGCTGATCCGGTTTATGATATTTTAGAgcaaatacaaaatgaaatgaGGGAAAATGAAATGCAACAACATGAACCGGAAAATGCTCAGGTCAATGCTGTGACCTTTACTATTAATACGATGTCCGAAAGTCATGAAGTATTGGACACTGCAAACATTCAAACAACTACAATTGTCCATAATGAAGAAGATTTATTGGCTTCGCCACACGATGTCAAACCCACTTTACTGCAAGTGGTTAAACGTTTTGTTTGCGATCAGTGTCCTCGCACCTTTAAGAAACATATACGTCTGGTCGAACATCAACGTCTGCATACGGGCGAAAAGCCTTTCGGTTGTGACGTGTGCGGCAAACAGTTTCGCATACGCATGCGTCTTAACGAACACAAATTACGACATTCCaaagaaaagaaattcaaaTGTGAACTCTGTGATTTGGCCTGTTGCACGAAGCAGGATTTGAATCTACACATGCGCCATCATACCAACGATCGGCGTTTCCAGTGCCCCATGTGCCCCAAGGCATTTGTGCGTAGTTCAGATCTCAAGATTCATGTACGCGTACATACAGGCGAAAAACCTTTTGTGTGTGACATTTGCCACAAATGCTTCCGGGCCAATCAAAATCTTAGCGTTCACAAAAAATCACACATGGGTGACGCTTCGAAAACCTATAAGTGCGAACACTGTGAGAAAAAGTTTATGCGCAACATTGATCGTAAGGTGCATATGCGGTCGCACACTGGCGAAAAGCCCTACAAATGTGAGATATGTCAACGTGGTTATTCTTCAAAATTCAATGTACGGGCACACATCGAACGAGATCATATATCGGCCAATGGCGTGGGTGCACCGCCCAAGGGTAAAAAGAAACCAGGACCCAAGCCAAAGGGCTTAAAGGCCGAGTTAGAGAAACAGAAGAAACTAATAGAGGAATTGCAAAATCAACTTTTGCAACAGATAAAAACCGATGAAAAAATGATTAATGCCGACGAGGAAATATTACCACATGACACTCTACAAGATTGTACGATAACCGGCTCTACGCCGCTCAGCCCTAGCCACAGCAACAGCAACTGTAATCAAGATCCCATACAAAGTGCTTATGAATTGCTGAAGAAACTTAAAACAACCGCAACTACCTCTAAACCTTTAACTATAATACCTTCTCCGCCTCCACTAGAAGAGCCCACCTCCAATCCctttacaaaagcaaaaaaagccgCTTCCTCAACTATACTACCTCTCACCATAACACAAAAGATCGAACAACATTCTCCAGCAGCTTCCAGCTCTTCATCAACGAGATCTACTGGTTCGTGTCTAAGCACACCTTCACCTCCCAAGACCTCCACCACAAAAGTGGTAGCACAAAAAACCTCTTTGGGCATACAACAAGTGTCAGTAACCGTGTCCATGCAAGTGGAAAATGTGACTGCACCCACAGCCGCATTTGCATCCGAAAAGGAAACTGCTGGCATTTTGACAACACAAACAAACGGCGAAGCATCACCAACAACGATGGCGGCAACTAGTgttaaaaaagagagaaaaattaCAAGCTATTTTTCGGTGGTGGGTCAAAAGGCAGATGCTTAA
- Protein Sequence
- MINTLLEHVPIKIEVKDLEEESKGNRVKKAPEAKVSKDNTMDETDKDLVDDDEDVDDYDDDYEDEEEDDDDEEEEESETETDALEILKEATLLISSDEEAELEAQRIRFPDKFITKKIRRDSNLSSRSSSRNSQTSNASRAQISKEISTKDTREEIEKSQRISPLLKTTEKEKTLESQTKENNNNSNTNILMQTNKKTEKLKLENNKNKHLEAGKIVENNKSAADCLNGNTENNRNIENLRKSPANVPGSGGGGGTKSRRGSNNSTCSVASTVASDSAETESCGNIYVFNLQQKLIFNCEFCDLKYGELDNFGRHLHEAHKIFNLDEDPEKENAPRNLRNRNNAPKNAGNVKKEPLQCLVTLAEPPVTLPVSVLAEPLDSCGNVFILNHRKLFLVCGYCECKYANLDLFEKHLRQQHRIFEGCRNEVNVVPKVEVKEEIIAISEVVPQQGIIAPQAMVAIPAEIPLDISITPENVAQTEEALKELSATEETKQTETTITESSTNPENTLNVENSSQTAVSDQTEVPLAEVVSNDENLLEPMAIEQPASPKKTKAKRRFSPVKPETTVNKRPKRNTRNNTKAKEEPISMTVEENIPEQSIKSPAPTILAEETDKIDESVATAESKDNRKSSETTEDKKPTTLEIKDPEESNLCTDTQESKKLTAVKSKEVKKLTKSTETKKTLVVETKEKRKSFKTRELKKCPSPAETIQTKDRRKSLKSKESTKSIDTKTVEIKNLRETRKSKKSLVDKETANTVETTETEEGKKSTKILDLPIQEKENAQTKQTRSSAKSPEFKETPEPAVENETEKKQQQCTKCEKTFARKECLRIHERVHTGEKPFICEICHKSFRAKQNLSIHKRYHLGESSRTFKCEQCDKKFWRNTDLKVHIRSHTGEKKFQCGICLHSYSSKVNVQKHIERDHLPADGVAGKPPRGKKRKGQNYKVLQEELEYQIKIIEELQKAKKEKETNTPVLLTAQVAQMPQQSIHYEVSEQEQLMQDFNADPVYDILEQIQNEMRENEMQQHEPENAQVNAVTFTINTMSESHEVLDTANIQTTTIVHNEEDLLASPHDVKPTLLQVVKRFVCDQCPRTFKKHIRLVEHQRLHTGEKPFGCDVCGKQFRIRMRLNEHKLRHSKEKKFKCELCDLACCTKQDLNLHMRHHTNDRRFQCPMCPKAFVRSSDLKIHVRVHTGEKPFVCDICHKCFRANQNLSVHKKSHMGDASKTYKCEHCEKKFMRNIDRKVHMRSHTGEKPYKCEICQRGYSSKFNVRAHIERDHISANGVGAPPKGKKKPGPKPKGLKAELEKQKKLIEELQNQLLQQIKTDEKMINADEEILPHDTLQDCTITGSTPLSPSHSNSNCNQDPIQSAYELLKKLKTTATTSKPLTIIPSPPPLEEPTSNPFTKAKKAASSTILPLTITQKIEQHSPAASSSSSTRSTGSCLSTPSPPKTSTTKVVAQKTSLGIQQVSVTVSMQVENVTAPTAAFASEKETAGILTTQTNGEASPTTMAATSVKKERKITSYFSVVGQKADA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -