Basic Information

Insect: Paykullia maculata
Gene Symbol: -
Assembly: GCA_003055125.1
Location: NDXZ01090508.1:1181-5438[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00019 0.013 16.3 1.8 1 23 32 54 32 54 0.98

2 16 1.3e-06 8.9e-05 23.1 0.7 1 23 61 83 61 83 0.99

3 16 0.00044 0.03 15.1 0.3 1 23 89 111 89 111 0.92

4 16 2.4e-07 1.7e-05 25.4 0.2 1 23 117 139 117 139 0.98

5 16 0.001 0.071 14.0 3.6 1 23 146 168 146 168 0.96

6 16 1.1e-05 0.00074 20.2 3.4 1 23 174 196 174 196 0.97

7 16 1.1e-05 0.00077 20.1 3.5 1 23 202 224 202 224 0.99

8 16 0.019 1.3 10.0 1.0 1 23 230 252 230 252 0.96

9 16 0.0006 0.041 14.7 2.0 1 23 336 358 336 358 0.98

10 16 4.5e-07 3.1e-05 24.5 0.3 1 23 368 390 368 390 0.99

11 16 8.6e-06 0.00059 20.5 1.5 1 23 396 418 396 418 0.92

12 16 1.3e-06 9.1e-05 23.1 0.1 1 23 424 446 424 446 0.97

13 16 7e-05 0.0048 17.6 1.1 1 23 453 475 453 475 0.96

14 16 8.4e-07 5.8e-05 23.7 1.3 1 23 481 503 481 503 0.98

15 16 1.6e-06 0.00011 22.8 3.5 1 23 509 531 509 531 0.99

16 16 0.062 4.2 8.4 0.3 1 23 537 559 537 559 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00019	0.013	16.3	1.8	1	23	32	54	32	54	0.98
2	16	1.3e-06	8.9e-05	23.1	0.7	1	23	61	83	61	83	0.99
3	16	0.00044	0.03	15.1	0.3	1	23	89	111	89	111	0.92
4	16	2.4e-07	1.7e-05	25.4	0.2	1	23	117	139	117	139	0.98
5	16	0.001	0.071	14.0	3.6	1	23	146	168	146	168	0.96
6	16	1.1e-05	0.00074	20.2	3.4	1	23	174	196	174	196	0.97
7	16	1.1e-05	0.00077	20.1	3.5	1	23	202	224	202	224	0.99
8	16	0.019	1.3	10.0	1.0	1	23	230	252	230	252	0.96
9	16	0.0006	0.041	14.7	2.0	1	23	336	358	336	358	0.98
10	16	4.5e-07	3.1e-05	24.5	0.3	1	23	368	390	368	390	0.99
11	16	8.6e-06	0.00059	20.5	1.5	1	23	396	418	396	418	0.92
12	16	1.3e-06	9.1e-05	23.1	0.1	1	23	424	446	424	446	0.97
13	16	7e-05	0.0048	17.6	1.1	1	23	453	475	453	475	0.96
14	16	8.4e-07	5.8e-05	23.7	1.3	1	23	481	503	481	503	0.98
15	16	1.6e-06	0.00011	22.8	3.5	1	23	509	531	509	531	0.99
16	16	0.062	4.2	8.4	0.3	1	23	537	559	537	559	0.95

Sequence Information

Coding Sequence: ATGCCAACGTACAGCGATAATAGTCATCATAAACCAGCgacaagaaaaaagaaatatgtagaGGACAAAAAAGTCGATGCCCACAGACAGGTTTATCCCTGTGAGAAGTGCAAAAGAAAGCTAAAATCGGAAacctctttaaaaaaacatcaagAAATGCACGAAAGTAAAgaacaaacatataaatgttCTATTTGCCAAGAAGTATTTGATGACAGATCCTTGTTAAAAGATCATACCCGCTCACATAGTAgtgaaaaagtatttttatgttcAGAATGCGGCAAAGGTTATACAACAGCTGGAGGCTTGAAAGAACATTCATTTCGCCATCTAAATGAAAAGCGATTTTCCTGCCCTGACTGTCCCCGTTCATTTACCACTAAAACAGATCTGATCTCCCACCTTATCATGCATAAAGGGAAGCCAAAAAATCACATTTGTGACATTTGTGGACGTGGCTTTCACAAACCATTCCTattgaaaaaacacaaaatgtatCATAATAACGAAAGACCATTCGCTTGTGAGTTTTGTGAAAAATGttttgtaacaaatgaaaaacttaaacgCCACACTCGCATTCATACTGGCGAAAAACCATATAAATGCAATTATTGTCAAAATGCCTACTGCCAATCGAGTGAGTTAATAAAACACCTACGATCTCATTTAGGAGATAATGTTTATCAATGCGAAATGTGTCCGCTCCGATTCAAAACAGTCAAAATTTTACGCCTTCACTTTTCAACACATAAAGATGATGACGAGGAAACAAAAAGTCGAAATTTGTCAGAATTAAATGCTTTGGAAATGAAGGGTGTATTCTTTAAcaaaactgaGATAACTGATAAGTCTTCAATACTCAGACGAGAAGAAATTGATGATGAAGTGTTTGAATCATTTTTATACGATGACGATGACGATGAAGATGTTaaagatgatgatgacgatgacgagGACTATCaggaaatttataaagaaaaaatcatcatagaacaactttttccatgtgaaaaatgtaaaagaaaattaaaatctaaattatCATTAAAGAAACATCTAGAAATGCATGCGAAACGTGATAATGAGGAACCAAAATATGTGTGTAATATTTGTGATAAagctttttcaCAGGGTTACATGCTTAAAGACCATATACGTTCGCATAGTGGTGAAAGGCCGTTTTTATGCTCAGAATGTGGAAAATCCTTTAGCTCCTCAGGAAGTTTGAAACAACACTCATTTCGGCAtcttaatgaaaaacaatttcaatgcCCAGACTGCCCCAGATCATTTCCCACTAAAACGGATTTGGCTTCGCATTACGATGTTCATAAAGCCAGGCCTAGAACACATATTTGCGATATCTGTGGTCGCGGATTTCCAAAACCATTTCTATTGAAAAAGCATAAAATGTATCACACTAACGATCGTCCATTTTCCTGTGAATATTGTGAAAAAcgGTTTATAACTAATGAGAAACTACAACGTCACGTTCGAATTCATACTGGTGAAAAACCTTATAAATGCAATTACTGCGAAAAAGCCTATTGTCAATCAAATGAATTAACCAAACATTTACGAATTCATCTTGGCGATAACGTTTATCAGTGCGAATTGTGTCCCTTAAGATTTCCCACAGTTAAAGTTGTTCGTGAGCACTTCTCTACGCATAAAAACGATGATGAAGAAACTAAAGTTAGAAATTTGGCAGAACTAAATGCGTTGACATTAAAAGGGATTTTTTGcagataa
Protein Sequence: MPTYSDNSHHKPATRKKKYVEDKKVDAHRQVYPCEKCKRKLKSETSLKKHQEMHESKEQTYKCSICQEVFDDRSLLKDHTRSHSSEKVFLCSECGKGYTTAGGLKEHSFRHLNEKRFSCPDCPRSFTTKTDLISHLIMHKGKPKNHICDICGRGFHKPFLLKKHKMYHNNERPFACEFCEKCFVTNEKLKRHTRIHTGEKPYKCNYCQNAYCQSSELIKHLRSHLGDNVYQCEMCPLRFKTVKILRLHFSTHKDDDEETKSRNLSELNALEMKGVFFNKTEITDKSSILRREEIDDEVFESFLYDDDDDEDVKDDDDDDEDYQEIYKEKIIIEQLFPCEKCKRKLKSKLSLKKHLEMHAKRDNEEPKYVCNICDKAFSQGYMLKDHIRSHSGERPFLCSECGKSFSSSGSLKQHSFRHLNEKQFQCPDCPRSFPTKTDLASHYDVHKARPRTHICDICGRGFPKPFLLKKHKMYHTNDRPFSCEYCEKRFITNEKLQRHVRIHTGEKPYKCNYCEKAYCQSNELTKHLRIHLGDNVYQCELCPLRFPTVKVVREHFSTHKNDDEETKVRNLAELNALTLKGIFCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00350323;
90% Identity: -
80% Identity: -