Pmau015598.1
Basic Information
- Insect
- Paykullia maculata
- Gene Symbol
- grau
- Assembly
- GCA_003055125.1
- Location
- NDXZ01048049.1:5790-8406[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.12 1.6e+02 2.8 0.1 11 23 241 253 232 258 0.83 2 8 0.00051 0.67 10.4 4.0 5 43 291 325 287 326 0.80 3 8 0.0027 3.5 8.1 0.5 14 29 327 342 323 348 0.79 4 8 0.11 1.4e+02 2.9 1.5 5 43 349 383 345 383 0.79 5 8 0.0001 0.13 12.7 1.3 5 39 377 408 374 415 0.93 6 8 1.8e-05 0.023 15.1 3.3 1 44 402 442 402 442 0.94 7 8 0.32 4.2e+02 1.4 0.2 18 43 451 473 447 474 0.81 8 8 0.18 2.4e+02 2.2 5.0 1 29 463 491 463 531 0.84
Sequence Information
- Coding Sequence
- atgagtTGTTTATTATGTttgaaaatgaatgaaaatactaaaaaatgtaTCACAATAAATTCTACTGAATGGCAAAAACTAAATATAGAGAACATTATCGAAAAATATTTGTGGAAAATGGAACATATTAACACCTTTTCCAACATGTGCCAAACATGTTGGcaggaattaaaaaatttccataatttCTATACAGAAATAGAAAAGGCACATactaatttaaatactttaataaaaagcgAAGTGATTTCTGATGATGTTTCTGGTGATAAACATGAATTGACATACAAAAgctcaataaataaaacagaaaatgagCAAATTGAACCCGAGATTTTATTGCTGAAAGAAGAAAATCCTTTAGAAATTTTCGAAAAAGAGGAAGATGTCGAAGAATTTAGTAACTTGAGAAAAAGAATTAAACGTAAATGTAAATTTCGAAAAGCTTTAAATGATGAAAAAttcggtaaaaaaaacaaatccataaaaagaaataaaaaatataaaaataaagaagaaaataaatcggACTATAAGCAACATCAAGAGAAAGTTATAATCAAATCAGAAGAGGAATcgaaaaaatacacaaaagacATGAATACCATTGAAAACTCCAACGATTACGATGATATTAGATGTGATAGTGAAAGTGATATGGAACCAACAAACACTGATGACTCGCTTAAGTATCAGCAACGCCAAGAACATGATAGACTCATAGCCCAACATCTTGAAATCACCTGTAACATATGCCAAATTCCGCTGGCAACATTTTCCTTGACAGTTAAACACTACAAAGAGGAACATAATCAACGTGGATATGCCATTTGTTGTAACCGCAAACTTTATGATCGTTCAGAAATAATGGATCATTTCAAATTACATGAAAATccagaatattttaaatgtaaatattgtgATAAAATATTGTCTAGCCGCGTCTGCTTAAAGTTGCACATCAAAAACATTCACGAACAAAAGGGCATTGAATGTGATATCTGTGGCAAAACTCTGTCAACTGAATCCAGtctaaaaatgcataaattattTCATGATActgaaaataataagaaattaccATGTAAACAATGTGATAAGTcCTACCTCTCCAAATACTCGTTAGCCAATCATGTACGTACAGTTCACTTAAAAagttacaataaaatttgtgaCCTTTGTGGTGCATCCATATCTGGAAAGTCTAGATTTAAACGTCATATATTAGAACACGAAGGTAAAACACCAATAGTAACTTGTGAGGTTTGCGGTCGACGTCTCTCCGATATGAAATCTTTAAAGCGTCACATGAACTCACATCATCCGCCGGAAGGAGTCAAAAATGAATTCAATTGTCCTATATGCTTGAAAATATTTGCTAGTCCTTCCAATGTTAAGATGCATATAAAAGTTGTTCACGAAAATAGCTATGAAAGAAAATGTGCGCTTTGTGAGAAAGTATTTAAGAGACCGGATGCATTAAAGGATCACATGGCAAAACATATTGGTAAACCTTTACATGCTTGTGGTTTTTGTCCAAAGAGTTTTTATTCAAATGGCCAGATGCATGCTCACCGAAAGCGAGTTCATCCAATGGAATGGCAGGAGTCTGTACGAGAAAAATTTTCTGGAAATTTACCAGAGAAATATGTTGCAAAACTAgtggaaaatgtttaa
- Protein Sequence
- MSCLLCLKMNENTKKCITINSTEWQKLNIENIIEKYLWKMEHINTFSNMCQTCWQELKNFHNFYTEIEKAHTNLNTLIKSEVISDDVSGDKHELTYKSSINKTENEQIEPEILLLKEENPLEIFEKEEDVEEFSNLRKRIKRKCKFRKALNDEKFGKKNKSIKRNKKYKNKEENKSDYKQHQEKVIIKSEEESKKYTKDMNTIENSNDYDDIRCDSESDMEPTNTDDSLKYQQRQEHDRLIAQHLEITCNICQIPLATFSLTVKHYKEEHNQRGYAICCNRKLYDRSEIMDHFKLHENPEYFKCKYCDKILSSRVCLKLHIKNIHEQKGIECDICGKTLSTESSLKMHKLFHDTENNKKLPCKQCDKSYLSKYSLANHVRTVHLKSYNKICDLCGASISGKSRFKRHILEHEGKTPIVTCEVCGRRLSDMKSLKRHMNSHHPPEGVKNEFNCPICLKIFASPSNVKMHIKVVHENSYERKCALCEKVFKRPDALKDHMAKHIGKPLHACGFCPKSFYSNGQMHAHRKRVHPMEWQESVREKFSGNLPEKYVAKLVENV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01201919;
- 90% Identity
- iTF_01162480;
- 80% Identity
- iTF_01162480;