Basic Information

Gene Symbol
-
Assembly
GCA_003055125.1
Location
NDXZ01106849.1:5409-7161[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00018 0.21 12.1 0.2 3 42 29 81 28 85 0.67
2 4 1.9e-07 0.00023 21.6 0.8 4 46 123 178 121 178 0.82
3 4 7.3e-09 8.5e-06 26.2 0.1 4 46 216 271 214 271 0.81
4 4 1e-08 1.2e-05 25.7 0.1 3 46 309 365 308 365 0.76

Sequence Information

Coding Sequence
atggaaattaatGGCACTCAATGTGAccaatttgttaaagaaaaatttgctaACTCCTCCACGTTATCACGCAAAAGTATTCAAAaaTGGTCAGATAAAGAGACCAAACATCTTTTGGATTCTTATACAAATTATATCTCTGAAATTGGGCCCTTTAGGCAACTAAAGACAAAAAGAGATATGTGGGCCAAAATTGCTAATGAAATCCCAGCGAAGACGGCAATACAATGCGAAGGAAAGTTCAAGGcacttttaaaagcaaacaaaataaaagtggacGCTAATGAAACTTCTAGCTCAGAAAGTATTGACTTTGAGGAGGAGTTTCTTGATTCCCCCACGCCAtcatacaaaacaatacaaatgTGGTCAGATGAAGACACCAaacaacttttgaaattttatgcGATTTATATAAGTGAAATTGAACCTTTTAAGGAACTAAAGACAAAAAAAGACATGTGGGATAAAATTGCAAGGGAAATCTCTAAGAAGACGGGAAAGCAATGTTTTGAAAGATACAAAACGGTGTTAAGAAGAAAGAAATTGGCAGAAGATAAAAATAAGGCTTCTtgcccaaaaataaaaacaaaagactttggGGAGGAGCTTCCTGTGACCCCCTCATACAGAACAATTCAAATATGGTCAGATGGGGAAACCAGACAACTTTTAAACtcttattcaaaatataaatgtaaaattggaccctcaaaaaaatttaaaaacaaaaaagacatGTGGTCTAAAATTGCGACTGAGTTCCCTGACAGGACACCAAGACAATGCATAGAAAGGTACAaaacagttttaagaaaaaatacattagtAGTGGATAACAAAAAAGCtgtcttagaaaaaaaaagtacttactTTGAGGACGAGGTTCTTGAACTTCACACATCATCATACAAAAGTATTCAAAaatggTCAGATAAGGAGACTGTAAAGCTTTttgacttttataaaatttatatttctgaaGTTGGaccattaaaaagatttaaggCAAAGAAACACATGTGGGCTGATATTGCAAGTGTAATCCCTGGTAAGACAGCAAAACAATGCGAAGAAAGATACAAAACGGttttaagaagcaataaatTAGCAAAGGTCAATAATGAAGATTTTGTTGACTTTGAAATGGAGTCTAATAACACAAACTTTACGGACGATTCCATAGAACCTACAGTTCAGATAAGCAACAATAAGTGTATAAAAGTGGAAAAGAACGAAAAGGAAGAGAAGCTTACTAATATAAGCTTATTAGATAACGCCACCGAACTTGGTATCCAAGTAGGCAGCAATAATTGTATAAATGTGAAAAACAgcgagaaaataaaaaaggaacaacTTAAGATAAGAAGTATGACGCTTTTAGAAACTTTAATAGAAATTTCTGAAAGAAAAGAGGAAGCAAGGCAAAGACGCCACCAAGAAAAAatggatttattaaaaaatactattagAAAGATAAGTTATAAAagataa
Protein Sequence
MEINGTQCDQFVKEKFANSSTLSRKSIQKWSDKETKHLLDSYTNYISEIGPFRQLKTKRDMWAKIANEIPAKTAIQCEGKFKALLKANKIKVDANETSSSESIDFEEEFLDSPTPSYKTIQMWSDEDTKQLLKFYAIYISEIEPFKELKTKKDMWDKIAREISKKTGKQCFERYKTVLRRKKLAEDKNKASCPKIKTKDFGEELPVTPSYRTIQIWSDGETRQLLNSYSKYKCKIGPSKKFKNKKDMWSKIATEFPDRTPRQCIERYKTVLRKNTLVVDNKKAVLEKKSTYFEDEVLELHTSSYKSIQKWSDKETVKLFDFYKIYISEVGPLKRFKAKKHMWADIASVIPGKTAKQCEERYKTVLRSNKLAKVNNEDFVDFEMESNNTNFTDDSIEPTVQISNNKCIKVEKNEKEEKLTNISLLDNATELGIQVGSNNCINVKNSEKIKKEQLKIRSMTLLETLIEISERKEEARQRRHQEKMDLLKNTIRKISYKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-