Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_003055125.1
Location
NDXZ01014978.1:2889-8398[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-26 1.5e-22 80.1 0.1 2 89 200 283 199 283 0.95

Sequence Information

Coding Sequence
ATGTCAACAAAGATAACTTCAGCTTCGGCCGATAGTAGTAGTAATAACAGCAGCACTACTGCCAGTCCAGCCGCAACTTCCTCAATGTCCGCAGCAGCAAATGGTTCCACAACGCCTGCTAGACGTCTACGCACCAGAACTTCAACGGGAGGCAGTGAATCGgcccaaaaaaaatatggacCTCTTACCGAAAGAAGTGACTCCGTTTCCAATACGTCCAGCACGACCAGCGGAAATGAAGAGAAGCCAAGTGCAAGTAAAAAATATCACAACAGTTGTCCCCTACCGCCCACGAGTTCTGGACGCAAAGAAAAGATTCATTCTCTACCCCACAGCTCCAGTTCTTTTAACATGAACAAGACAGAGGAGTTTAACTTTGATACACCGCTAGAGTGTCCAGTTTTTCGTCCTACTCAAGAAGAATTCAAAAATCCCCTGGCCTATATCAGCAAGATACGACCGATTGCGGAAAAGTGTGGAATTGCAAAGATTTTGCCACCGGAATCTTGGTCGCCACCTTTCGCCGTGGATGTGGACAAATTGAAATTTACGCCACGTGTGCAACGTCTTAATGAGTTGGAGGCGAAAACTCGTGTCAAACTCAACTTTCTGGATCAAATAGCAAAATTTTGGGAGTTGCAGGGTTCATCTCTAAAAATTCCAATGGTGGAGCGTAAAGCCTTGGATCTGTACACATTGCATCGTGTAGTGCAGGAGGAGGGCGGCGTGGAACAGACAACTAAGGAGCGTAAATGGGCTAAAGTTGCCAATCGCATGTCATATCCATCTAGTAAGAGCGTCGGTGCAACATTGAAAGCCCACTATGAGCGGATTTTGCATCCCTTTGAAGTGTACACTTCTGGCAAAGTTTTGGGACAAGGCAGTGCTACTGGGACCACTGTAAACAGTCCAGATGTTAAATTAGAAGATGGCACGGATTACAAAGCCCATGAGATACCAACACGTCAACAGATTGCTCCGCCGAATGAAACAAATGCACGGCGCTCCAAACGTTTTGCAAACTCCAGTGCCAGTTGTGGCCTTGGCATAAATCGTAGTGGTATGAAAACGGAAACCAAGGAGGACTTTAAACGGGATTTGTTGAGTTGTTTTAATGCATCTGCTGCTTCGGCAGTCAGTCGCGCAAATGCTGGTAACGGTATATCCGGTTCAGCTCAAAAGAAAGCTCCTGATCCCAATGTTGCTGTTGATCCTTTAATGAAGTATATTTGCCACATATGTAATCGTGGCGATGTGGAGGAGTCAATGTTACTGTGTGATGGCTGCGATGATTCATATCATACCTTCTGCTTGCTGCCACCTTTATCCAGTATACCAAAAGgtGAATGGCTTTGTCCACGTTGTGTTGTGGAAGAGGTAAGCAAGCCTACAGAAGCATTTGGCTTCGAACAGGCTGAGCGTGAATACACTTTGCAACAATTTGGTCAAATGGCAGATCAATTTAAGATGGACTATTTTCGCAAGCCGGTGCATTTGGTGCCGACTGATTTAGTGGAACGTGAGTTCTGGCGCATTGTTTCCTCCATCGATGAGGATGTCACTGTGGAATATGGCGCCGATCTACATACAATGGATCATGGTTCCGGTTTTCCGACAAAGAGCTCACTCTACTTGTTGCCTGGCGATCAGGAATATGCAGAGTCGAGCTGGAATCTAAACAATTTGCCTTTGCTAGAAGACTCTATCCTGGGACACATTAATGCCGATATCAGTGGCATGAATGCTCCCTGGATGTATGTGGGCATGTGTTTCGCTGCTTTTTGCTGGCATAATGAAGATCATTGGAGTTATTCCATCAACTATTTGCATTGGGGTGAACCGAAAACATGGTATGGCGTACCCGGTAGTTGTGCTGAACAATTCGAAGAAACCATGAAGCAAGCGGCTCCTGAACTGTTTGCATCTCAACCTGATTTACTTCATCAGCTGGTGACTAACATGAATCCCAACATTTTAATGAACAACGGTGTGCCGGTTTATCGCACCGACCAAAATGCCGGTGAATTTGTGATAACATTTCCTCGTGCCTACCATGCTGGCTTTAATCAGGGCTACAATTTCGCCGAAGCAGTCAATTTCGCTCCTGCCGACTGGCTCAAAATGGGTCGTGAGTGCATAAATCACTATTCAATGTTGCGTCGTTTCTGTGTATTTTCCCACGATGAACTCGTCTGTAAGATGGCTCTTGAGCCGGCCAAATTGACTTTTGGCATAGCTACCGCCTGCTACATCGATATGGCTGAAATGGTAGACTCCGAAAAGAAACTGCGTAAGTCTCTCCTTGAATGGGGCGTCACGCGTGCTGAGCGAAAAGCATTTGAACTGATACCGGATGACGAACGTCACTGTCTGGAGTGCAATACGACTTGCTTCCTTTCGGCCGTCTCATGTGAATGCACAAAGACAATTGTTTGCTTGCGTCACTACACCGTTTTGTGCACGTGCCCACCCGACAAACATACACTTTTGTATCGCTACACACTTGACGAGATGCCACTTATGTTGCAAAAACTCAAATCAAAAGCTCAGAGTTTCGAGAGATGGTTATCACGATGCCGGGACATTGTTGATGCCAACACCCCGACCTCGGTAACTTTGCAAGAGCTCCAAGAGCTGTGTAAAGAGGCCGAGATGAAAAAATTTCCATCATCGTTGCTAATCGATCGCCTAAACGCCGCAGTCTTAGAGGCAGAGAAATGTGTCACCGTAATCCAGCAATTAGGAATCAATAAGGTTCGCACCCGTTCTGATAACAGTTTGGAAGCTGCCCAGTATAAACTTACCATGGAGGAGCTTGAGCTGTTCGTACAAGAAATTGATAACCTTTGCTGCACTATAGAAGAGGGAATATCAGTTAGAGAACTTTTAGTTTTGGGCAAACAATTTGTAGAACGCACCAATGGAATATTGAAGCATTCACTGGATGCTCTAGAGGAAACCGAATTAGAAGCGATTATTGGGGAGGGCAACTCATTGCGTATAGAATTGCCACAAATGCACCATCTAAACATGCGTCTTAAGCAATTAAAATGGTACAAACGTTCACAGGGCCTACGAGCTGCAAGTGCAAAACTTACTTACGATGACGTCAAGAGTTTATTGCATGTTGCTGCTGCCGAAATTGCACCAACAGACCCAATAATAGATGCCGAAATGCGTAAGCTGCAAGAAATTGGAGCATCGATAGAAGCTTGGGAATGTCAggctaataaatatttcaactgCAGCACGCAACGTCATGAACTGGTGGAGATTGAACAGTTTCTTAAGACGGCCGCCGATATTGAGGGACAAGTGCCTTCGTATAGTATGTTAAAAGATGCTTTGCGTAAAGCAAAAGAATGGTTGCGATCCGTTGAACAACTACAGGCCAATGATCACTTCCCCTACTGTCATACATTGGAGGCAATTGTCAATCGGGGTACAAGTATACCCATAAGGCTGGAGGAGCTGTTGCGTATGCAAGGTCATTTAAAAAGTGCCCACGACTGGAAGGAAAACACTGAAAgagcatttttaaagaaaaacactttttacaCTCTACTAGAAGTTTTAATGCCCCGCGGAGAGTCAGTTATTATCGACTCGGACCTGAAAAAACCCTTTGAGGATGATTTCGTTAAAGAAATGAATCCAGCTCAAATAGTGGATTCGTTTAAGGTGGCAGAAGAAAAGGAATTGCGCGATATGCGTGAACTAAGACGCCAAAATATGACCAAAAGTCCTTTGCGCGATGATTATTGTCTCTGCAAATCCCCCTTCCAGGGCGTAATGTACAACTGTCAGCTATGCCGGGATTGGTTCCATGAGGAGTGTGTACCTCCACAGTCACAACTGTCAACAAACTGTGTCTCTGACGAAAGCATTAAAAAGAAGTGGTTGTGTCCCTCTTGTGTTCGCTCGAAGAGACCACGCCTAGAAACAATACTACCGCTTTTGGTGTCCCTACAAACTTTACCCATACGTTTGCCCGAAGACGAGGCACTGCGCTGTCTGGCGGAAAGGGCCATGAATTGGCAGGATCGAGCAAGAAAAGCTCTTACAAGCCCTGATGTCACTGCAGCTTTGGAAGTAATAGCTACAGCTGCGGCAcaacaaagaaacaaacaaaagaaacgtAAGGGAACTAAGGATTCAGGCTCCGCACGAAAGGCACGACGCAGTAGTCAACACAACGCTAAGGAAGATGGTTCCGACAATAACGACTCGGATGACGAGGGTCGATTGCATATAGTTGAGGAAAATTTTAGCAACGACGAAGAGGAGGAGGGCGAAGCCAGTGCATCAAACCACGATAATGGTGCTACTCAAAACGGTCTTCAGCTTCAAAAACTTCTGTCCGACAGCGAAACAGAAAATTTGGAGGAACTCATGATGGAAGGTGATCTGCTGGAAGTATCACTTGACGAATCCCAAGAGCTTTGGCGGGTGTTGGCGGCTGTACATCCAGTTCAGCCTTCTGAAGCAGCTGCACTCGTGGAACAAAGCATGCTTAAGCAACGGAACCAACAAAACGTGCAACCGCCATCCAGTGTCAATTCAGCGGCCGAAGATTCAAACGACAGCCTTTTGGTTCAAAGTAGTCCCAACAGTACAAGCAACAGCGGCAGTGGTGCTGGACGCGGTTCATCTAACTTGGTGAAAAAACGTCGCTCCCTAGACCCTGCAACCGGTTGTCCAATGCCACGCAAAAAAATTGCCACCCCGAACAAAACGCAAAACGCTGGACCAAGCACGACTTCAGCGAAAAAGTCCGCTAGAAAATCAGAAGCCAATAACAAATCCCTGGCAACAGCCGATGACAATGCCGAGAATAACCATCCCACGAAACAACCGAATGGCAGTTCTCAGATTCAAACCAACAACACGGCGTCTGGATCGCAAAAAAAACATCGGAAACGATTGGGAGGcaatattaacaataacaattcTACAACGCCGGCTAGTCAAAAGAAGAATTCCCAAAGGGCTCAAATGGCTCAACAGGAGGATGACGAAGAAGAATGCCGGGCCGAAAACTGTCACAAACCAACTGGCCGAGAAGTGGACTGGGTACAATGTGATGGCGGTTGTAACGAATGGTTCCACATGTACTGTGTCGGTCTCATTCGCAGCCAAATCAAAGCCGACGACGATTACATTTGCGTTCGTTGTTCTAAGAAAGTAGACGAACCAGGTGGAAACAACAGCTCGTCTGCATCAGCAGTAACAACACAACAGAAGGGACGCTCCCAGCCGGCTCgataa
Protein Sequence
MSTKITSASADSSSNNSSTTASPAATSSMSAAANGSTTPARRLRTRTSTGGSESAQKKYGPLTERSDSVSNTSSTTSGNEEKPSASKKYHNSCPLPPTSSGRKEKIHSLPHSSSSFNMNKTEEFNFDTPLECPVFRPTQEEFKNPLAYISKIRPIAEKCGIAKILPPESWSPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRVVQEEGGVEQTTKERKWAKVANRMSYPSSKSVGATLKAHYERILHPFEVYTSGKVLGQGSATGTTVNSPDVKLEDGTDYKAHEIPTRQQIAPPNETNARRSKRFANSSASCGLGINRSGMKTETKEDFKRDLLSCFNASAASAVSRANAGNGISGSAQKKAPDPNVAVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGQMADQFKMDYFRKPVHLVPTDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFASQPDLLHQLVTNMNPNILMNNGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECINHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELIPDDERHCLECNTTCFLSAVSCECTKTIVCLRHYTVLCTCPPDKHTLLYRYTLDEMPLMLQKLKSKAQSFERWLSRCRDIVDANTPTSVTLQELQELCKEAEMKKFPSSLLIDRLNAAVLEAEKCVTVIQQLGINKVRTRSDNSLEAAQYKLTMEELELFVQEIDNLCCTIEEGISVRELLVLGKQFVERTNGILKHSLDALEETELEAIIGEGNSLRIELPQMHHLNMRLKQLKWYKRSQGLRAASAKLTYDDVKSLLHVAAAEIAPTDPIIDAEMRKLQEIGASIEAWECQANKYFNCSTQRHELVEIEQFLKTAADIEGQVPSYSMLKDALRKAKEWLRSVEQLQANDHFPYCHTLEAIVNRGTSIPIRLEELLRMQGHLKSAHDWKENTERAFLKKNTFYTLLEVLMPRGESVIIDSDLKKPFEDDFVKEMNPAQIVDSFKVAEEKELRDMRELRRQNMTKSPLRDDYCLCKSPFQGVMYNCQLCRDWFHEECVPPQSQLSTNCVSDESIKKKWLCPSCVRSKRPRLETILPLLVSLQTLPIRLPEDEALRCLAERAMNWQDRARKALTSPDVTAALEVIATAAAQQRNKQKKRKGTKDSGSARKARRSSQHNAKEDGSDNNDSDDEGRLHIVEENFSNDEEEEGEASASNHDNGATQNGLQLQKLLSDSETENLEELMMEGDLLEVSLDESQELWRVLAAVHPVQPSEAAALVEQSMLKQRNQQNVQPPSSVNSAAEDSNDSLLVQSSPNSTSNSGSGAGRGSSNLVKKRRSLDPATGCPMPRKKIATPNKTQNAGPSTTSAKKSARKSEANNKSLATADDNAENNHPTKQPNGSSQIQTNNTASGSQKKHRKRLGGNINNNNSTTPASQKKNSQRAQMAQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLIRSQIKADDDYICVRCSKKVDEPGGNNSSSASAVTTQQKGRSQPAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01235504;
90% Identity
iTF_01201377; iTF_00975385;
80% Identity
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